Hairpin DNA-Templated Silver Nanoclusters as Novel Beacons in Strand Displacement Amplification for MicroRNA Detection

Analytical Chemistry

Volumn 88, Issue 2, 2016, Pages 1294-1302

  Zhang, Jingpu ^a,b   Li, Chao ^a   Zhi, Xiao ^b   Ramón, Gabriel Alfranca ^a   Liu, Yanlei ^a,b   Zhang, Chunlei ^a   Pan, Fei ^a,b   Cui, Daxiang ^a,b  

^a Shanghai Jiao Tong University   (China)

^b SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMARKERS; DISEASES; FLUORESCENCE; NANOCLUSTERS; PROBES; SIGNAL DETECTION; SILVER;

DISPLACEMENT AMPLIFICATION; FLUORESCENCE ENHANCEMENT; FLUORESCENT ENHANCEMENTS; MICRORNA DETECTIONS; SHORTER WAVELENGTH; SILVER NANOCLUSTERS; SINGLE-BASE MISMATCH; TARGET RECOGNITION;

RNA;

DNA; METAL NANOPARTICLE; MICRORNA; SILVER; TUMOR MARKER;

BLOOD; CHEMISTRY; HUMAN; NUCLEIC ACID AMPLIFICATION; STOMACH NEOPLASMS; TUMOR CELL CULTURE;

BIOMARKERS, TUMOR; DNA; HUMANS; METAL NANOPARTICLES; MICRORNAS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; SILVER; STOMACH NEOPLASMS; TUMOR CELLS, CULTURED;

EID: 84955489034     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/acs.analchem.5b03729     Document Type: Article

References (32)

1. Bartel, D. P. Cell 2004, 116, 281-297 10.1016/S0092-8674(04)00045-5
2. Iorio, M. V.; Croce, C. M. Embo Mol. Med. 2012, 4, 143-159 10.1002/emmm.201100209
3. Zhang, J.; Song, Y.; Zhang, C.; Zhi, X.; Fu, H.; Ma, Y.; Chen, Y.; Pan, F.; Wang, K.; Ni, J.; Jin, W.; He, X.; Su, H.; Cui, D. Theranostics 2015, 5, 733-745 10.7150/thno.10305
4. Dijkstra, J. R.; Mekenkamp, L. J. M.; Teerenstra, S.; De Krijger, I.; Nagtegaal, I. D. J. Cell. Mol. Med. 2012, 16, 683-690 10.1111/j.1582-4934.2011.01467.x
5. Notomi, T.; Okayama, H.; Masubuchi, H.; Yonekawa, T.; Watanabe, K.; Amino, N.; Hase, T. Nucleic Acids Res. 2000, 28, e63 10.1093/nar/28.12.e63
6. Kim, J.; Easley, C. J. Bioanalysis 2011, 3, 227-239 10.4155/bio.10.172
7. Guo, Q.; Yang, X.; Wang, K.; Tan, W.; Li, W.; Tang, H.; Li, H. Nucleic Acids Res. 2009, 37, e20 10.1093/nar/gkn1024
8. Tian, T.; Xiao, H.; Zhang, X.; Peng, S.; Zhang, X.; Guo, S.; Wang, S.; Liu, S.; Zhou, X.; Meyers, C.; Zhou, X. Chem. Commun. 2013, 49, 75-77 10.1039/C2CC36728A
9. Zhou, Z.; Du, Y.; Dong, S. Biosens. Bioelectron. 2011, 28, 33-37 10.1016/j.bios.2011.06.028
10. Morishita, K.; MacLean, J. L.; Liu, B.; Jiang, H.; Liu, J. Nanoscale 2013, 5, 2840-2849 10.1039/c3nr33421j
11. Liu, J. TrAC, Trends Anal. Chem. 2014, 58, 99 10.1016/j.trac.2013.12.014
12. Richards, C. I.; Choi, S.; Hsiang, J. C.; Antoku, Y.; Vosch, T.; Bongiorno, A.; Tzeng, Y. L.; Dickson, R. M. J. Am. Chem. Soc. 2008, 130, 5038-5039 10.1021/ja8005644
13. Yang, S. W.; Vosch, T. Anal. Chem. 2011, 83, 6935-6939 10.1021/ac201903n
14. Shah, P.; Rorvig Lund, A.; Ben Chaabane, S.; Thulstrup, P. W.; Kjaergaard, H. G.; Fron, E.; Hofkens, J.; Yang, S. W.; Vosch, T. ACS Nano 2012, 6, 8803-8814 10.1021/nn302633q
15. Liu, Y. Q.; Zhang, M.; Yin, B. C.; Ye, B. C. Anal. Chem. 2012, 84, 5165-5169 10.1021/ac300483f
16. Yeh, H. C.; Sharma, J.; Han, J. J.; Martinez, J. S.; Werner, J. H. Nano Lett. 2010, 10, 3106-3110 10.1021/nl101773c
17. Yeh, H. C.; Sharma, J.; Shih, I. M.; Vu, D. M.; Martinez, J. S.; Werner, J. H. J. Am. Chem. Soc. 2012, 134, 11550-11558 10.1021/ja3024737
18. Sylwia, W.; Kiyoshi, M.; Moin, A.; Juewen, L. Nanotechnology 2014, 25, 155501 10.1088/0957-4484/25/15/155501
19. Tsourkas; Behlke, A. M. A.; Bao, G. Nucleic Acids Res. 2002, 30, 4208-4215 10.1093/nar/gkf536
20. Antao, V. P.; Lai, S. Y.; Tinoco, I. Nucleic Acids Res. 1991, 19, 5901-5905 10.1093/nar/19.21.5901
21. Niemeyer, C. M.; Adler, M.; Wacker, R. Nat. Protoc. 2007, 2, 1918-1930 10.1038/nprot.2007.267
22. Guo, W.; Yuan, J.; Dong, Q.; Wang, E. J. Am. Chem. Soc. 2010, 132, 932-934 10.1021/ja907075s
23. O'Neill, P. R.; Velazquez, L. R.; Dunn, D. G.; Gwinn, E. G.; Fygenson, D. K. J. Phys. Chem. C 2009, 113, 4229-4233 10.1021/jp809274m
24. Xia, X. D.; Hao, Y. Q.; Hu, S. Q.; Wang, J. X. Biosens. Bioelectron. 2014, 51, 36-39 10.1016/j.bios.2013.07.036
25. Kypr, J.; Kejnovska, I.; Renciuk, D.; Vorlickova, M. Nucleic Acids Res. 2009, 37, 1713-1725 10.1093/nar/gkp026
26. Germann, M. W.; Vogel, H. J.; Pon, R. T.; Van de Sande, J. H. Biochemistry 1989, 28, 6220-6228 10.1021/bi00441a013
27. Volker, J.; Klump, H. H. Biochemistry 1994, 33, 13502-13508 10.1021/bi00249a039
28. Summers, M. F.; Byrd, R. A.; Gallo, K. A.; Samson, C. J.; Zon, G.; Egan, W. Nucleic Acids Res. 1985, 13, 6375-6386 10.1093/nar/13.17.6375
29. Driehorst, T.; O'Neill, P.; Goodwin, P. M.; Pennathur, S.; Fygenson, D. K. Langmuir 2011, 27, 8923-8933 10.1021/la200837z
30. Zhang, L.; Zhu, J.; Zhou, Z.; Guo, S.; Li, J.; Dong, S.; Wang, E. Chem. Sci. 2013, 4, 4004-4010 10.1039/c3sc51303c
31. Sharma, J. et al. Nanoscale 2012, 4, 4107-4110 10.1039/c2nr30662j
32. Duan, R.; Zuo, X.; Wang, S.; Quan, X.; Chen, D.; Chen, Z.; Jiang, L.; Fan, C.; Xia, F. Nat. Protoc. 2014, 9, 597-607 10.1038/nprot.2014.036