Evaluation of 3-hydroxybutyrate as an enzyme-protective agent against heating and oxidative damage and its potential role in stress response of poly(3-hydroxybutyrate) accumulating cells

Applied Microbiology and Biotechnology

Volumn 100, Issue 3, 2016, Pages 1365-1376

  Obruca, Stanislav ^a   Sedlacek, Petr ^a   Mravec, Filip ^a   Samek, Ota ^b   Marova, Ivana ^a  

^a BRNO UNIVERSITY OF TECHNOLOGY   (Czech Republic)

^b INSTITUTE OF SCIENTIFIC INSTRUMENTS   (Czech Republic)

Author keywords

3 Hydroxybutyrate; Chemical chaperone; Compatible solutes; PHB; PHB cycle; Poly(3 hydroxybutyrate)

Indexed keywords

CARBON; DIFFERENTIAL SCANNING CALORIMETRY; DYNAMIC LIGHT SCATTERING; LIGHT SCATTERING; METABOLISM;

3-HYDROXYBUTYRATE; CHEMICAL CHAPERONE; COMPATIBLE SOLUTES; PHB; PHB CYCLE; POLY-3-HYDROXYBUTYRATE;

ENZYMES;

3 HYDROXYBUTYRIC ACID; CHAPERONE; LYSOZYME; POLY(3 HYDROXYBUTYRIC ACID); TRIACYLGLYCEROL LIPASE; BACTERIAL PROTEIN; HYDROXYBUTYRIC ACID; POLY-BETA-HYDROXYBUTYRATE; POLYESTER; PROTECTIVE AGENT;

BACTERIUM; CELLS AND CELL COMPONENTS; ENZYME; ENZYME ACTIVITY; HEATING; HIGH TEMPERATURE; ORGANIC COMPOUND; OXIDATION; PROTEIN; STRESS RESISTANCE; TEMPERATURE EFFECT;

ANTIOXIDANT ACTIVITY; ARTICLE; BACTERIAL STRAIN; CHEMICAL STRUCTURE; CUPRIAVIDUS NECATOR; DENATURATION; ENZYME ACTIVITY; HEATING; HIGH TEMPERATURE; HYDROPHILICITY; MELTING POINT; MOLECULAR SIZE; OXIDATION; OXIDATIVE STRESS; PARTICLE SIZE; PHOTON CORRELATION SPECTROSCOPY; PROTEIN TERTIARY STRUCTURE; STRESS; THERMAL ANALYSIS; THERMOSTABILITY; CHEMISTRY; ENZYME STABILITY; ENZYMOLOGY; HEAT; METABOLISM; OXIDATION REDUCTION REACTION;

BACTERIA (MICROORGANISMS); CUPRIAVIDUS NECATOR;

3-HYDROXYBUTYRIC ACID; BACTERIAL PROTEINS; CUPRIAVIDUS NECATOR; ENZYME STABILITY; HOT TEMPERATURE; HYDROXYBUTYRATES; MURAMIDASE; OXIDATION-REDUCTION; OXIDATIVE STRESS; POLYESTERS; PROTECTIVE AGENTS;

EID: 84955212772     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-015-7162-4     Document Type: Article

References (44)

1. Andersson MM, Breccia JD, Hatti-Kaul R (2000) Stabilizing effect of chemical additives against oxidation of lactate dehydrogenase. Biotechnol Appl Biochem 32:145–153
2. Ayub ND, Pettinari MJ, Mendez BS, Lopez NI (2007) The polyhydroxyalkanoate genes of a stress resistant Antarctic Pseudomonas are situated within a genomic island. Plasmid 58:240–248
3. Ayub ND, Tribelli PM, Lopez NI (2009) Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14–3 during low temperature adaptation. Extremophiles 13:59–66
4. ZERO calibrated modulated temperature differential scanning calorimetry to characterize model protein formulations. Int J Pharm 309:146–156
5. Barth S, Huhn M, Matthey B, Klimka A, Galinski EA, Engert A (2000) Compatible-solutes-supported periplasmic expression of functional recombinant proteins under stress conditions. Appl Microbiol Biotechnol 66:1572–1579
6. Bennett BD, Kimball EH, Gao M, Osterhout R, Van Dien SJ, Rabinowitz JD (2009) Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli. Nat Chem Biol 5:593–599
7. Bolen DW, Baskakov IV (2001) The osmophobic effect: natural selection of a thermodynamic force in protein folding. J Mol Biol 310:955–963
8. Borges N, Ramos A, Raven NDH, Sharp RJ, Santos H (2002) Comparative study of the thermostabilizing properties of mannosylglycerate and other compatible solutes on model enzymes. Extremophiles 6:209–216
9. Brigham CJ, Speth DR, Rha CK, Sinskey AJ (2012) Whole-genome microarray and gene deletion studies reveal regulation of the polyhydroxyalkanoate production cycle by the stringent response in Ralstonia eutropha H16. Appl Environ Microbiol 78:8033–8044
10. Busby TF, Ingham KC (1984) Thermal stabilization of antithrombin III by sugars and sugar derivatives and the effects of nonenzymatic glycosylation. Biochim Biophys Acta 799:80–89
11. Ellis RJ (2001) Macromolecular crowding: obvious but underappreciated. Trends Biochem Sci 10:597–604
12. Faria TQ, Mingote A, Siopa F, Ventura R, Maycock C, Santos H (2008) Design of new enzyme stabilizers inspired by glycosides of hyperthermophilic microorganisms. Carbohydr Res 343:3025–3033
13. Goh L-K, Purama RK, Sudesh K (2014) Enhancement of stress tolerance in polyhydroxyalkanoate producers without mobilization of the accumulated granules. Appl Biochem Biotechnol 172:1585–1598
14. Goller K, Galinski EA (1999) Protection of a model enzyme (lactate dehydrogenase) against heat, urea and freeze-thaw treatment by compatible solutes additives. J Mol Catal B: Enzym 7:37–45
15. s, affects polyhydroxyalkanoate metabolism in Pseudomonas putida. FEMS Microbiol Lett 284:218–224
16. Iustman LJR, Tribelli PM, Ibarra JG, Catone MV, Venero ECS, Lopez NI (2015) Genome sequence analysis of Pseudomonas extremaustralis provides new insights into environmental adaptability and extreme conditions resistance. Extremophiles 19:207–220
17. Jain NK, Roy I (2009) Effect of trehalose on protein structure. Protein Sci 18:24–36
18. Kadouri D, Burdman S, Jurkevitch E, Okon Y (2002) Identification and isolation of genes involved in poly(beta-hydroxybutyrate) biosynthesis in Azospirillum brasilense and characterization of a phbC mutant. Appl Environ Microbiol 68:2943–2949
19. Kadouri D, Jurkevitch E, Okon Y (2003) Poly beta-hydroxybutyrate depolymerase (PhaZ) in Azospirillum brasilense and characterization of a phaZ mutant. Arch Microbiol 180:309–318
20. Kadouri D, Jurkevitch E, Okon Y (2005) Ecological and agricultural significance of bacterial polyhydroxyalkanoates. Crit Rev Microbiol 31:55–67
21. Kaushik JK, Bhat R (1999) A mechanistic analysis of the increase in the thermal stability of proteins in aqueous carboxylic acid salt solutions. Protein Sci 8:222–233
22. Kolp S, Pietsch M, Galinski EA, Gutschow M (2006) Compatible solutes as protectants for zymogenes against proteolysis. Biochim Biophys Acta 1764:1234–1242
23. Marles-Wright J, Lewis RJ (2007) Stress responses of bacteria. Curr Opin Struct Biol 17:755–760
24. Martin DD, Bartlett DH, Roberts MF (2002) Solute accumulation in the deep-sea bacterium Photobacterium profundum. Extremophiles 6:507–514
25. Mitra RK, Sinha SS, Pal SK (2007) Hydration in protein folding: thermal unfolding/refolding of human serum albumin. Langmuir 23:10224–10229
26. Miyawaki O, Ma GL, Horie T, Hibi A, Ishikawa T, Kimura S (2008) Thermodynamic, kinetic, and operational stabilities of yeast alcohol dehydrogenase in sugar and compatible osmolyte solutions. Enzyme Microb Technol 43:495–499
27. Nguyen SD, Sok DE (2003) Oxidative inactivation of paraoxonase1, an antioxidant protein and its effect on antioxidant action. Free Radic Res 37:1319–1330
28. Obruca S, Marova I, Stankova M, Mravcova L, Svoboda Z (2010a) Effect of ethanol and hydrogen peroxide on poly(3-hydroxybutyrate) biosynthetic pathway in Cupriavidus necator H16. World J Microbiol Biotechnol 26:1261–1267
29. Obruca S, Marova I, Svoboda Z, Mikulikova R (2010b) Use of controlled exogenous stress for improvement of poly(3-hydroxybutyrate) production in Wautersia eutropha: a preliminary study. Folia Microbiol 55:17–22
30. Obruca S, Petrik S, Benesova P, Svoboda Z, Eremka L, Marova I (2014) Utilization of oil extracted from spent coffee grounds for sustainable production of polyhydroxyalkanoates. Appl Microbiol Biotechnol 98:5883–8590
31. Pastor JM, Salvador M, Argandona M, Bernal V, Reina-Bueno M, Csonka LN, Iborra JL, Vargas C, Nieto JJ, Canovas M (2010) Ectoines in cell stress protection: uses and biotechnological production. Biotechnol Adv 28:782–801
32. Pavez P, Castillo JL, Gonzales C, Martinez M (2009) Poly-β-hydroxyalkanoate exert protective effect against carbon starvation and frozen conditions in Sphingopyxis chilensis. Curr Microbiol 59:636–640
33. Pinsirodom P, Parkin KL (2001) Lipase assays. Curr Protocols Food Anal Chem C3.1.1-C3.1.13
34. Quillaguaman J, Guzman H, Van-Thouc D, Hatti-Kaul R (2010) Synthesis and production of polyhydroxyalkanoates by halophiles: current potential and future prospects. Appl Microbiol Biotechnol 85:1687–1696
35. Raberg M, Voigt B, Hecker M, Steinbuchel A (2014) A closer look on the polyhydroxybutyrate- (PHB-) negative phenotype of Ralstonia eutropha PHB-4. PLoS One 9, e95907
36. Roberts MF (2005) Organic compatible solutes of halotolerant and halophilic microorganisms. Saline Syst 1:5. doi:10.1186/1746-1448-1-5
37. Ruiz JA, Lopez NI, Fernandez RO, Mendez BS (2001) Polyhydroxyalkanoate degradation is associated with nucleotide accumulation and enhances stress resistance and survival of Pseudomonas oleovorans in natural water microcosm. Appl Environ Microbiol 67:225–230
38. Santoro MM, Liu YF, Khan SMA, Hou LX, Bolen DW (1992) Increased thermal-stability of proteins in the presence of naturally occurring osmolytes. Biochemistry 31:5278–5283
39. Soto G, Setten L, Lisi C, Maurelis C, Mozzicafreddo M, Cuccioloni M, Angeletti M, Ayub ND (2012) Hydroxybutyrate prevents protein aggregation in the halotolerant bacterium Pseudomonas sp. CT13 under abiotic stress. Exremophiles 16:455–462
40. Van-Thuoc D, Hashim SO, Hatti-Kaul R, Mamo G (2013) Ectoine-mediated protection of enzyme from the effect of pH and temperature stress: a study using Bacillus halodurans xylanase as a model. Appl Microbiol Biotechnol 97:6271–6278
41. Wang Y, Zhang L (2010) Ectoine improves yield of biodiesel catalyzed by immobilized lipase. J Mol Catal B: Enzym 62:90–95
42. Witzemann EJ (1926) The oxidation of alpha- and beta-hydroxybutyric acids with hydrogen peroxide. J Am Chem Soc 48:211–222
43. Wu D, He J, Gong Y, Chen D, Zhu X, Qiu N, Sun M, Li M, Yu Z (2011) Proteomic analysis reveals the strategies of Bacillus thuringiensis YBT-1520 for survival under long-term heat stress. Proteomics 11:2580–2591
44. Zhao YH, Li HM, Qin LF, Wang HH, Chen GQ (2007) Disruption of the polyhydroxyalkanoate synthase gene in Aeromonas hydrophila reduces its survival ability under stress conditions. FEMS Microbiol Lett 276:34–41