The Microbiome in Populations with a Low and High Prevalence of Caries

Journal of Dental Research

Volumn 95, Issue 1, 2016, Pages 80-86

  Johansson, I ^a   Witkowska, E ^a   Kaveh, B ^a   Lif Holgerson, P ^a   Tanner, A C R ^b  

^a UMEÅ UNIVERSITY   (Sweden)

^b FORSYTH INSTITUTE   (United States)

Author keywords

adolescents; mutans streptococci; oral microbiota; pyrosequencing; Romania; Sweden

Indexed keywords

ABIOTROPHIA; ACTINOBACTERIA; ACTINOMYCES; ADOLESCENT; BACTEROIDETES; BIOFILM; CAMPYLOBACTER; CAPNOCYTOPHAGA; CLASSIFICATION; COMPARATIVE STUDY; DENTAL CARIES; DENTAL PROCEDURE; DMF INDEX; EUBACTERIUM; FAST FOOD; FUSOBACTERIA; GRAM NEGATIVE BACTERIUM; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; MICROFLORA; NEISSERIA; PEPTOSTREPTOCOCCUS; PORPHYROMONAS; PREVOTELLA; SELENOMONAS; STREPTOCOCCUS; STREPTOCOCCUS MUTANS; STREPTOCOCCUS SOBRINUS; VEILLONELLA;

ABIOTROPHIA; ACTINOBACTERIA; ACTINOMYCES; ADOLESCENT; BACTEROIDETES; BIOFILMS; CAMPYLOBACTER; CAPNOCYTOPHAGA; DENTAL CARE; DENTAL CARIES; DMF INDEX; EUBACTERIUM; FUSOBACTERIA; GRAM-NEGATIVE BACTERIA; HUMANS; MICROBIOTA; NEISSERIA; PEPTOSTREPTOCOCCUS; PORPHYROMONAS; PREVOTELLA; SELENOMONAS; SNACKS; STREPTOCOCCUS; STREPTOCOCCUS MUTANS; STREPTOCOCCUS SOBRINUS; VEILLONELLA;

EID: 84951790078     PISSN: 00220345     EISSN: 15440591     Source Type: Journal    
DOI: 10.1177/0022034515609554     Document Type: Article

References (33)

1. Chen T, Yu WH, Izard J, Baranova OV, Lakshmanan A, Dewhirst FE,. 2010. The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information. Database (Oxford). 2010: baq013.
2. Crielaard W, Zaura E, Schuller AA, Huse SM, Montijn RC, Keijser BJ,. 2011. Exploring the oral microbiota of children at various developmental stages of their dentition in the relation to their oral health. BMC Med Genomics. 4: 22.
3. David LA, Materna AC, Friedman J, Campos-Baptista MI, Blackburn MC, Perrotta A, Erdman SE, Alm EJ,. 2014. Host lifestyle affects human microbiota on daily timescales. Genome Biol. 15 (7): R89.
4. Dewhirst FE, Chen T, Izard J, Paster BJ, Tanner AC, Yu WH, Lakshmanan A, Wade WG,. 2010. The human oral microbiome. J Bacteriol. 192 (19): 5002-5017.
5. Do LG,. 2012. Distribution of caries in children variations between and within populations. J Dent Res. 91 (6): 536-543.
6. Funieru C, Twetman S, Funieru E, Dumitrache AM, Sfeatcu RI, Baicus C,. 2014. Caries experience in schoolchildren in Bucharest, Romania: the PAROGIM study. J Public Health Dent. 74 (2): 153-158.
7. Gross EL, Leys EJ, Gasparovich SR, Firestone ND, Schwartzbaum JA, Janies DA, Asnani K, Griffen AL,. 2010. Bacterial 16S sequence analysis of severe caries in young permanent teeth. J Clin Microbiol. 48 (11): 4121-4128.
8. Hugoson A, Koch G,. 2008. Thirty year trends in the prevalence and distribution of dental caries in Swedish adults (1973-2003). Swed Dent J. 32 (2): 57-67.
9. Jiang W, Ling Z, Lin X, Chen Y, Zhang J, Yu J, Xiang C, Chen H,. 2014. Pyrosequencing analysis of oral microbiota shifting in various caries states in childhood. Microb Ecol. 67 (4): 962-969.
10. Jiang W, Zhang J, Chen H,. 2013. Pyrosequencing analysis of oral microbiota in children with severe early childhood dental caries. Curr Microbiol. 67 (5): 537-542.
11. Kanasi E, Dewhirst FE, Chalmers NI, Kent R Jr., Moore A, Hughes CV, Pradhan N, Loo CY, Tanner AC,. 2010. Clonal analysis of the microbiota of severe early childhood caries. Caries Res. 44 (5): 485-497.
12. Li J, Nasidze I, Quinque D, Li M, Horz HP, André C, Garriga RM, Halbwax M, Fischer A, Stoneking M,. 2013. The saliva microbiome of Pan and Homo. BMC Microbiol. 13: 204.
13. Lif Holgerson P, Harnevik L, Hernell O, Tanner AC, Johansson I,. 2011. Mode of birth delivery affects oral microbiota in infants. J Dent Res. 90 (10): 1183-1188.
14. Ling Z, Kong J, Jia P, Wei C, Wang Y, Pan Z, Huang W, Li L, Chen H, Xiang C,. 2010. Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing. Microb Ecol. 60 (3): 677-690.
15. Luo AH, Yang DQ, Xin BC, Paster BJ, Qin J,. 2012. Microbial profiles in saliva from children with and without caries in mixed dentition. Oral Dis. 18 (6): 595-601.
16. Ma C, Chen F, Zhang Y, Sun X, Tong P, Si Y, Zheng S,. 2015. Comparison of oral microbial profiles between children with severe early childhood caries and caries-free children using the human oral microbe identification microarray. PLoS One. 10 (3): e0122075.
17. Mantzourani M, Gilbert SC, Sulong HN, Sheehy EC, Tank S, Fenlon M, Beighton D,. 2009. The isolation of bifidobacteria from occlusal carious lesions in children and adults. Caries Res. 43 (4): 308-313.
18. Marsh PD,. 2003. Are dental diseases examples of ecological catastrophes? Microbiology. 149 (Pt 2): 279-294.
19. Mason MR, Nagaraja HN, Camerlengo T, Joshi V, Kumar PS,. 2013. Deep sequencing identifies ethnicity-specific bacterial signatures in the oral microbiome. PLoS One. 8 (10): e77287.
20. Nasidze I, Li J, Quinque D, Tang K, Stoneking M,. 2009. Global diversity in the human salivary microbiome. Genome Res. 19 (4): 636-643.
21. Paster BJ, Boches SK, Galvin JL, Ericson RE, Lau CN, Levanos VA, Sahasrabudhe A, Dewhirst FE,. 2001. Bacterial diversity in human subgingival plaque. J Bacteriol. 183 (12): 3770-3783.
22. Petersen PE, Bourgeois D, Ogawa H, Estupinan-Day S, Ndiaye C,. 2005. The global burden of oral diseases and risks to oral health. Bull World Health Organ. 83 (9): 661-669.
23. Ruoff KL,. 1991. Nutritionally variant streptococci. Clin Microbiol Rev. 4 (2): 184-190.
24. Simón-Soro A, Tomás I, Cabrera-Rubio R, Catalan MD, Nyvad B, Mira A,. 2013. Microbial geography of the oral cavity. J Dent Res. 92 (7): 616-621.
25. Söderström U, Johansson I, Sunnegårdh-Grönberg K,. 2014. A retrospective analysis of caries treatment and development in relation to assessed caries risk in an adult population in Sweden. BMC Oral Health. 14: 126.
26. Sønju Clasen AB, Hannig M, Skjørland K, Sønju T,. 1997. Analytical and ultrastructural studies of pellicle on primary teeth. Acta Odontol Scand. 55 (6): 339-343.
27. Takahashi N, Nyvad B,. 2011. The role of bacteria in the caries process: ecological perspectives. J Dent Res. 90 (3): 294-303.
28. Tanner AC, Kent RL Jr., Holgerson PL, Hughes CV, Loo CY, Kanasi E, Chalmers NI, Johansson I,. 2011. Microbiota of severe early childhood caries before and after therapy. J Dent Res. 90 (11): 1298-1305.
29. Thomas RZ, Zijnge V, Ciçek A, de Soet JJ, Harmsen HJ, Huysmans MC,. 2012. Shifts in the microbial population in relation to in situ caries progression. Caries Res. 46 (5): 427-431.
30. Wade WG,. 2013. The oral microbiome in health and disease. Pharmacol Res. 69 (1): 137-143.
31. Yano A, Kaneko N, Ida H, Yamaguchi T, Hanada N,. 2002. Real-time PCR for quantification of Streptococcus mutans. FEMS Microbiol Lett. 217 (1): 23-30.
32. Zaura E,. 2012. Next-generation sequencing approaches to understanding the oral microbiome. Adv Dent Res. 24 (2): 81-85.
33. Zaura E, Keijser BJ, Huse SM, Crielaard W,. 2009. Defining the healthy "core microbiome" of oral microbial communities. BMC Microbiol. 9: 259.