메뉴 건너뛰기




Volumn 71, Issue 1, 2016, Pages 233-242

Minimally Invasive Sampling Method Identifies Differences in Taxonomic Richness of Nasal Microbiomes in Young Infants Associated with Mode of Delivery

Author keywords

16S rRNA; Microbiome; Next generation sequencing; Upper respiratory tract

Indexed keywords

BACTERIUM; CLASSIFICATION; COHORT ANALYSIS; DEVICES; EVALUATION STUDY; FEMALE; FOOD INTAKE; GENETICS; GROWTH, DEVELOPMENT AND AGING; HUMAN; INFANT; ISOLATION AND PURIFICATION; MALE; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MICROFLORA; NEWBORN; NOSE; OBSTETRIC DELIVERY; PHYLOGENY; PREGNANCY; PROCEDURES; RESPIRATORY SYSTEM; RESPIRATORY TRACT INFECTION;

EID: 84951566650     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-015-0663-y     Document Type: Article
Times cited : (51)

References (53)
  • 1
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • The Human Microbiome Project Consortium (2012) Structure, function and diversity of the healthy human microbiome. Nature 486:207–214. doi:10.1038/nature11234
    • (2012) Nature , vol.486 , pp. 207-214
    • The Human Microbiome Project Consortium1
  • 2
    • 33751213587 scopus 로고    scopus 로고
    • The asthma epidemic
    • PID: 17124020, COI: 1:CAS:528:DC%2BD28Xht1ChsbvP
    • Eder W, Ege MJ, von Mutius E (2006) The asthma epidemic. N Engl J Med 355(21):2226–2235. doi:10.1056/NEJMra054308
    • (2006) N Engl J Med , vol.355 , Issue.21 , pp. 2226-2235
    • Eder, W.1    Ege, M.J.2    von Mutius, E.3
  • 3
    • 84885861461 scopus 로고    scopus 로고
    • Asthma
    • PID: 24041942
    • Martinez FD, Vercelli D (2013) Asthma. Lancet 382(9901):1360–1372. doi:10.1016/S0140-6736(13)61536-6
    • (2013) Lancet , vol.382 , Issue.9901 , pp. 1360-1372
    • Martinez, F.D.1    Vercelli, D.2
  • 4
    • 84858439578 scopus 로고    scopus 로고
    • The human microbiome: at the interface of health and disease
    • PID: 22411464, COI: 1:CAS:528:DC%2BC38Xjs1Wguro%3D
    • Cho I, Blaser MJ (2012) The human microbiome: at the interface of health and disease. Nat Rev Genet 13(4):260–270. doi:10.1038/nrg3182
    • (2012) Nat Rev Genet , vol.13 , Issue.4 , pp. 260-270
    • Cho, I.1    Blaser, M.J.2
  • 5
    • 84879546770 scopus 로고    scopus 로고
    • Microbiome in human health and disease
    • PID: 23901633, COI: 1:CAS:528:DC%2BC3sXhsFaltb%2FL
    • Madupu R, Szpakowski S, Nelson KE (2013) Microbiome in human health and disease. Sci Prog 96(Pt 2):153–170
    • (2013) Sci Prog , vol.96 , pp. 153-170
    • Madupu, R.1    Szpakowski, S.2    Nelson, K.E.3
  • 6
    • 84878277172 scopus 로고    scopus 로고
    • Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ
    • Guinane CM, Cotter PD (2013) Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ. Ther Adv Gastroenterol 6(4):295–308. doi:10.1177/1756283X13482996
    • (2013) Ther Adv Gastroenterol , vol.6 , Issue.4 , pp. 295-308
    • Guinane, C.M.1    Cotter, P.D.2
  • 7
    • 84906155402 scopus 로고    scopus 로고
    • Microbiome diversity and asthma and allergy risk
    • PID: 25149168
    • Legatzki A, Rosler B, von Mutius E (2014) Microbiome diversity and asthma and allergy risk. Curr Allergy Asthma Rep 14(10):466. doi:10.1007/s11882-014-0466-0
    • (2014) Curr Allergy Asthma Rep , vol.14 , Issue.10 , pp. 466
    • Legatzki, A.1    Rosler, B.2    von Mutius, E.3
  • 11
    • 79551495183 scopus 로고    scopus 로고
    • Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
    • Huang YJ, Nelson CE, Brodie EL, Desantis TZ, Baek MS, Liu J, Woyke T, Allgaier M, Bristow J, Wiener-Kronish JP, Sutherland ER, King TS, Icitovic N, Martin RJ, Calhoun WJ, Castro M, Denlinger LC, Dimango E, Kraft M, Peters SP, Wasserman SI, Wechsler ME, Boushey HA, Lynch SV, National Heart, Lung, and Blood Institute’s Asthma Clinical Research Network (2011) Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma. J Allergy Clin Immunol 127(2):372–381 e371–373. doi:10.1016/j.jaci.2010.10.048
    • (2011) J Allergy Clin Immunol 127(2) , vol.372-381 , pp. e371-e373
  • 13
    • 84864473876 scopus 로고    scopus 로고
    • Long-term outcomes of early-onset wheeze and asthma
    • PID: 22738675
    • Grad R, Morgan WJ (2012) Long-term outcomes of early-onset wheeze and asthma. J Allergy Clin Immunol 130(2):299–307. doi:10.1016/j.jaci.2012.05.022
    • (2012) J Allergy Clin Immunol , vol.130 , Issue.2 , pp. 299-307
    • Grad, R.1    Morgan, W.J.2
  • 14
    • 0034105129 scopus 로고    scopus 로고
    • Respiratory syncytial virus bronchiolitis in infancy is an important risk factor for asthma and allergy at age 7
    • PID: 10806145, COI: 1:STN:280:DC%2BD3c3mvVSmtA%3D%3D
    • Sigurs N, Bjarnason R, Sigurbergsson F, Kjellman B (2000) Respiratory syncytial virus bronchiolitis in infancy is an important risk factor for asthma and allergy at age 7. Am J Respir Crit Care Med 161(5):1501–1507. doi:10.1164/ajrccm.161.5.9906076
    • (2000) Am J Respir Crit Care Med , vol.161 , Issue.5 , pp. 1501-1507
    • Sigurs, N.1    Bjarnason, R.2    Sigurbergsson, F.3    Kjellman, B.4
  • 15
    • 77958471150 scopus 로고    scopus 로고
    • Asthma and allergy patterns over 18 years after severe RSV bronchiolitis in the first year of life
    • PID: 20581410
    • Sigurs N, Aljassim F, Kjellman B, Robinson PD, Sigurbergsson F, Bjarnason R, Gustafsson PM (2010) Asthma and allergy patterns over 18 years after severe RSV bronchiolitis in the first year of life. Thorax 65(12):1045–1052. doi:10.1136/thx.2009.121582
    • (2010) Thorax , vol.65 , Issue.12 , pp. 1045-1052
    • Sigurs, N.1    Aljassim, F.2    Kjellman, B.3    Robinson, P.D.4    Sigurbergsson, F.5    Bjarnason, R.6    Gustafsson, P.M.7
  • 17
    • 84893938829 scopus 로고    scopus 로고
    • Viruses and microbiome alterations
    • PID: 24437408, COI: 1:CAS:528:DC%2BC2cXhtlekt73M
    • Lynch SV (2014) Viruses and microbiome alterations. Ann Am Thorac Soc 11(Suppl 1):S57–S60. doi:10.1513/AnnalsATS.201306-158MG
    • (2014) Ann Am Thorac Soc , vol.11 , pp. S57-S60
    • Lynch, S.V.1
  • 19
    • 84875146022 scopus 로고    scopus 로고
    • Pathogenic bacteria colonizing the airways in asymptomatic neonates stimulates topical inflammatory mediator release
    • PID: 23370914
    • Folsgaard NV, Schjorring S, Chawes BL, Rasmussen MA, Krogfelt KA, Brix S, Bisgaard H (2013) Pathogenic bacteria colonizing the airways in asymptomatic neonates stimulates topical inflammatory mediator release. Am J Respir Crit Care Med 187(6):589–595. doi:10.1164/rccm.201207-1297OC
    • (2013) Am J Respir Crit Care Med , vol.187 , Issue.6 , pp. 589-595
    • Folsgaard, N.V.1    Schjorring, S.2    Chawes, B.L.3    Rasmussen, M.A.4    Krogfelt, K.A.5    Brix, S.6    Bisgaard, H.7
  • 20
    • 84865339168 scopus 로고    scopus 로고
    • Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury
    • PID: 22929533, COI: 1:CAS:528:DC%2BC3sXitVyns7c%3D
    • Fouts DE, Pieper R, Szpakowski S, Pohl H, Knoblach S, Suh M-J, Huang S-T, Ljungberg I, Sprague BM, Lucas SK, Torralba M, Nelson KE, Groah SL (2012) Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury. J Transl Med 10(1):174
    • (2012) J Transl Med , vol.10 , Issue.1 , pp. 174
    • Fouts, D.E.1    Pieper, R.2    Szpakowski, S.3    Pohl, H.4    Knoblach, S.5    Suh, M.-J.6    Huang, S.-T.7    Ljungberg, I.8    Sprague, B.M.9    Lucas, S.K.10    Torralba, M.11    Nelson, K.E.12    Groah, S.L.13
  • 22
    • 84951571769 scopus 로고    scopus 로고
    • Sebastian S YAP
    • Sebastian S YAP. https://github.com/shpakoo/YAP
  • 23
  • 24
    • 83355173006 scopus 로고    scopus 로고
    • Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies
    • PID: 22194782, COI: 1:CAS:528:DC%2BC38XhsFejtA%3D%3D
    • Schloss PD, Gevers D, Westcott SL (2011) Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies. PLoS ONE 6(12), e27310. doi:10.1371/journal.pone.0027310
    • (2011) PLoS ONE , vol.6 , Issue.12
    • Schloss, P.D.1    Gevers, D.2    Westcott, S.L.3
  • 25
    • 67650021209 scopus 로고    scopus 로고
    • Microbial community profiling for human microbiome projects: tools, techniques, and challenges
    • PID: 19383763, COI: 1:CAS:528:DC%2BD1MXosVCktL8%3D
    • Hamady M, Knight R (2009) Microbial community profiling for human microbiome projects: tools, techniques, and challenges. Genome Res 19(7):1141–1152. doi:10.1101/gr.085464.108
    • (2009) Genome Res , vol.19 , Issue.7 , pp. 1141-1152
    • Hamady, M.1    Knight, R.2
  • 26
    • 84951571770 scopus 로고    scopus 로고
    • Tovchigrechko A. MGSAT—statistical analysis of microbiome and proteome abundance matrices with automated report generation
    • Tovchigrechko A. MGSAT—statistical analysis of microbiome and proteome abundance matrices with automated report generation. https://bitbucket.org/andreyto/mgsat
  • 27
    • 84927136941 scopus 로고    scopus 로고
    • The nasal cavity microbiota of healthy adults
    • PID: 25143824
    • Bassis CM, Tang AL, Young VB, Pynnonen MA (2014) The nasal cavity microbiota of healthy adults. Microbiome 2(1):27. doi:10.1186/2049-2618-2-27
    • (2014) Microbiome , vol.2 , Issue.1 , pp. 27
    • Bassis, C.M.1    Tang, A.L.2    Young, V.B.3    Pynnonen, M.A.4
  • 28
    • 72949091232 scopus 로고    scopus 로고
    • Bacterial community variation in human body habitats across space and time
    • PID: 19892944, COI: 1:CAS:528:DC%2BD1MXhsFGmsL7K
    • Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R (2009) Bacterial community variation in human body habitats across space and time. Science 326(5960):1694–1697. doi:10.1126/science.1177486
    • (2009) Science , vol.326 , Issue.5960 , pp. 1694-1697
    • Costello, E.K.1    Lauber, C.L.2    Hamady, M.3    Fierer, N.4    Gordon, J.I.5    Knight, R.6
  • 32
    • 84916206478 scopus 로고    scopus 로고
    • Early respiratory microbiota composition determines bacterial succession patterns and respiratory health in children
    • PID: 25329446
    • Biesbroek G, Tsivtsivadze E, Sanders EAM, Montijn R, Veenhoven RH, Keijser BJF, Bogaert D (2014) Early respiratory microbiota composition determines bacterial succession patterns and respiratory health in children. Am J Respir Crit Care Med 190(11):1283–1292. doi:10.1164/rccm.201407-1240OC
    • (2014) Am J Respir Crit Care Med , vol.190 , Issue.11 , pp. 1283-1292
    • Biesbroek, G.1    Tsivtsivadze, E.2    Sanders, E.A.M.3    Montijn, R.4    Veenhoven, R.H.5    Keijser, B.J.F.6    Bogaert, D.7
  • 33
    • 0036144573 scopus 로고    scopus 로고
    • Moraxella catarrhalis: from emerging to established pathogen
    • PID: 11781271
    • Verduin CM, Hol C, Fleer A, van Dijk H, van Belkum A (2002) Moraxella catarrhalis: from emerging to established pathogen. Clin Microbiol Rev 15(1):125–144. doi:10.1128/CMR.15.1.125-144.2002
    • (2002) Clin Microbiol Rev , vol.15 , Issue.1 , pp. 125-144
    • Verduin, C.M.1    Hol, C.2    Fleer, A.3    van Dijk, H.4    van Belkum, A.5
  • 34
  • 35
    • 77955386857 scopus 로고    scopus 로고
    • Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
    • PID: 20566857
    • Dominguez-Bello MG, Costello EK, Contreras M, Magris M, Hidalgo G, Fierer N, Knight R (2010) Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc Natl Acad Sci U S A 107(26):11971–11975. doi:10.1073/pnas.1002601107
    • (2010) Proc Natl Acad Sci U S A , vol.107 , Issue.26 , pp. 11971-11975
    • Dominguez-Bello, M.G.1    Costello, E.K.2    Contreras, M.3    Magris, M.4    Hidalgo, G.5    Fierer, N.6    Knight, R.7
  • 36
    • 51049084408 scopus 로고    scopus 로고
    • Cesarean delivery may affect the early biodiversity of intestinal bacteria
    • PID: 18716189, COI: 1:CAS:528:DC%2BD1cXhtVyksb%2FJ
    • Biasucci G, Benenati B, Morelli L, Bessi E, Boehm G (2008) Cesarean delivery may affect the early biodiversity of intestinal bacteria. J Nutr 138(9):1796S–1800S
    • (2008) J Nutr , vol.138 , Issue.9 , pp. 1796S-1800S
    • Biasucci, G.1    Benenati, B.2    Morelli, L.3    Bessi, E.4    Boehm, G.5
  • 37
    • 84890461111 scopus 로고    scopus 로고
    • Decreased gut microbiota diversity, delayed Bacteroidetes colonisation and reduced Th1 responses in infants delivered by caesarean section
    • PID: 23926244, COI: 1:CAS:528:DC%2BC2cXosVymtL8%3D
    • Jakobsson HE, Abrahamsson TR, Jenmalm MC, Harris K, Quince C, Jernberg C, Björkstén B, Engstrand L, Andersson AF (2014) Decreased gut microbiota diversity, delayed Bacteroidetes colonisation and reduced Th1 responses in infants delivered by caesarean section. Gut 63(4):559–566. doi:10.1136/gutjnl-2012-303249
    • (2014) Gut , vol.63 , Issue.4 , pp. 559-566
    • Jakobsson, H.E.1    Abrahamsson, T.R.2    Jenmalm, M.C.3    Harris, K.4    Quince, C.5    Jernberg, C.6    Björkstén, B.7    Engstrand, L.8    Andersson, A.F.9
  • 41
    • 84890260719 scopus 로고    scopus 로고
    • Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage
    • PID: 24331461, COI: 1:CAS:528:DC%2BC3sXhvFylt7fO
    • Yan M, Pamp SJ, Fukuyama J, Hwang PH, Cho D-Y, Holmes S, Relman DA (2013) Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage. Cell Host Microbe 14(6):631–640. doi:10.1016/j.chom.2013.11.005
    • (2013) Cell Host Microbe , vol.14 , Issue.6 , pp. 631-640
    • Yan, M.1    Pamp, S.J.2    Fukuyama, J.3    Hwang, P.H.4    Cho, D.-Y.5    Holmes, S.6    Relman, D.A.7
  • 42
    • 0346195651 scopus 로고    scopus 로고
    • Bacterial competition for human nasal cavity colonization: role of staphylococcal agr alleles
    • PID: 12513972, COI: 1:CAS:528:DC%2BD3sXkvVahsA%3D%3D
    • Lina G, Boutite F, Tristan A, Bes M, Etienne J, Vandenesch F (2003) Bacterial competition for human nasal cavity colonization: role of staphylococcal agr alleles. Appl Environ Microbiol 69(1):18–23. doi:10.1128/aem.69.1.18-23.2003
    • (2003) Appl Environ Microbiol , vol.69 , Issue.1 , pp. 18-23
    • Lina, G.1    Boutite, F.2    Tristan, A.3    Bes, M.4    Etienne, J.5    Vandenesch, F.6
  • 44
    • 33645219404 scopus 로고    scopus 로고
    • Caesarean section delivery and the risk of allergic disorders in childhood
    • PID: 16297144, COI: 1:STN:280:DC%2BD2Mnhs1Gitg%3D%3D
    • Renz-Polster H, David MR, Buist AS, Vollmer WM, O’Connor EA, Frazier EA, Wall MA (2005) Caesarean section delivery and the risk of allergic disorders in childhood. Clin Exp Allergy 35(11):1466–1472. doi:10.1111/j.1365-2222.2005.02356.x
    • (2005) Clin Exp Allergy , vol.35 , Issue.11 , pp. 1466-1472
    • Renz-Polster, H.1    David, M.R.2    Buist, A.S.3    Vollmer, W.M.4    O’Connor, E.A.5    Frazier, E.A.6    Wall, M.A.7
  • 45
    • 79551479539 scopus 로고    scopus 로고
    • A Western Australian survey of breastfeeding initiation, prevalence and early cessation patterns
    • PID: 20077131
    • Hauck YL, Fenwick J, Dhaliwal SS, Butt J (2011) A Western Australian survey of breastfeeding initiation, prevalence and early cessation patterns. Matern Child Health J 15(2):260–268. doi:10.1007/s10995-009-0554-2
    • (2011) Matern Child Health J , vol.15 , Issue.2 , pp. 260-268
    • Hauck, Y.L.1    Fenwick, J.2    Dhaliwal, S.S.3    Butt, J.4
  • 46
    • 84860280466 scopus 로고    scopus 로고
    • Breastfeeding after cesarean delivery: a systematic review and meta-analysis of world literature
    • PID: 22456657, COI: 1:CAS:528:DC%2BC38Xmtlyms7g%3D
    • Prior E, Santhakumaran S, Gale C, Philipps LH, Modi N, Hyde MJ (2012) Breastfeeding after cesarean delivery: a systematic review and meta-analysis of world literature. Am J Clin Nutr 95(5):1113–1135. doi:10.3945/ajcn.111.030254
    • (2012) Am J Clin Nutr , vol.95 , Issue.5 , pp. 1113-1135
    • Prior, E.1    Santhakumaran, S.2    Gale, C.3    Philipps, L.H.4    Modi, N.5    Hyde, M.J.6
  • 47
    • 78649602462 scopus 로고    scopus 로고
    • Elective cesarean delivery: does it have a negative effect on breastfeeding?
    • PID: 21083718
    • Zanardo V, Svegliado G, Cavallin F, Giustardi A, Cosmi E, Litta P, Trevisanuto D (2010) Elective cesarean delivery: does it have a negative effect on breastfeeding? Birth 37(4):275–279. doi:10.1111/j.1523-536X.2010.00421.x
    • (2010) Birth , vol.37 , Issue.4 , pp. 275-279
    • Zanardo, V.1    Svegliado, G.2    Cavallin, F.3    Giustardi, A.4    Cosmi, E.5    Litta, P.6    Trevisanuto, D.7
  • 50
    • 84920623236 scopus 로고    scopus 로고
    • Gut microbiota: a source of novel tools to reduce the risk of human disease?
    • PID: 25335085
    • Collado MC, Rautava S, Isolauri E, Salminen S (2015) Gut microbiota: a source of novel tools to reduce the risk of human disease? Pediatr Res 77(1-2):182–188. doi:10.1038/pr.2014.173
    • (2015) Pediatr Res , vol.77 , Issue.1-2 , pp. 182-188
    • Collado, M.C.1    Rautava, S.2    Isolauri, E.3    Salminen, S.4
  • 52
    • 84860569299 scopus 로고    scopus 로고
    • The human microbiome and its potential importance to pediatrics
    • PID: 22473366
    • Johnson CL, Versalovic J (2012) The human microbiome and its potential importance to pediatrics. Pediatrics 129(5):950–960. doi:10.1542/peds.2011-2736
    • (2012) Pediatrics , vol.129 , Issue.5 , pp. 950-960
    • Johnson, C.L.1    Versalovic, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.