Image analysis for detecting faulty spots from microarray images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 2534, Issue , 2002, Pages 259-266

  Ruosaari, Salla ^a   Hollmén, Jaakko ^a  

^a AALTO UNIVERSITY   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATION; BIOASSAY; GENES; IMAGE ANALYSIS;

AUTOMATED PROCESS; COST STRUCTURE; GENE ACTIVITIES; LOW QUALITIES; MICROARRAY IMAGES; MISCLASSIFICATIONS; SPATIAL CHARACTERISTICS; SYSTEMATIC VARIATION;

QUALITY CONTROL;

EID: 84949766195     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-36182-0_23     Document Type: Conference Paper

References (13)

1. T.R. Golub, D.K. Slonim, P. Tamayo, C. Huard, M. Gaasenbeek, J.P. Mesirov, H. Coller, M.H. Loh, J.R. Downing, M.A. Caligiuri, C.D. Bloomfield, and E.S. Lander. Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring. Science, 286:531–537, 1999.
2. Yidong Chen, Edward R. Dougherty, and Michael L. Bittner. Ratio-based decisions and the quantitative analysis of cdna microarray images. Journal of Biomedical Optics, 1997.
3. Mei-Ling Ting Lee, Frank C. Kuo, G.A. Whitmore, and Jeffrey Sklar. Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetetive cdna hybridizations. Proc. Natl Acad. Sci. USA, 2000.
4. Yee Hwa Yang, Michael J. Buckley, Sandrine Dudoit, and Terence P. Speed. Comparison of methods for image analysis on cdna microarray data. Technical Report 584, Department of Statistics, University of California, Berkeley, December 2000.
5. Xujing Wang, Soumitra Ghosh, and Sun-Wei Guo. Quantitative quality control in microarray image processing and data acquisition. Nucleic Acids Research, 29(15), 2001.
6. Ron Dror. Noise models in gene array analysis. Report in fulfillment of the area exam requirement in the MITDep artment of Electrical Engineering and Computer Science, 2001.
7. Mukund Thattai and Alexander van Oudenaarden. Intrinsic noise in gene regulatory networks. Proc. Natl Acad. Sci. USA, 2001.
8. Ertugrul M. Ozbudak, Iren Kurtser Mukund Thattai, Alan D. Grossman, and Alexander van Ouderaarden. Regulation of noise in the expression of a single gene. Nature Genetics, 2002.
9. Milan Sonka, Vaclav Hlavac, and Roger Boyle. Image Processing, Analysis and Machine Vision. Chapman & Hall Computing, 1993.
10. David Hand, Heikki Mannila, and Padhraic Smyth. Principles of Data Mining. Adaptive Computation and Machine Learning Series. MIT Press, 2001.
11. Richard O. Duda, Peter E. Hart, and David G. Stork. Pattern Classification. John Wiley & Sons, second edition, 2001.
12. J.P. Egan. Signal Detection Theory and ROC Analysis. New York: Academic Press, 1975.
13. John A. Swets. Measuring the accuracy of diagnostic systems. Science, 240:1285–1293, 1988.