-
1
-
-
84860324470
-
Roles for microRNAs in conferring robustness to biological processes
-
PMID: 22541426; PubMed Central PMCID: PMC3351105
-
Ebert MS, Sharp PA. Roles for microRNAs in conferring robustness to biological processes. Cell. 2012; 149(3):515-24. doi:10.1016/j.cell.2012.04.005 PMID: 22541426; PubMed Central PMCID: PMC3351105.
-
(2012)
Cell.
, vol.149
, Issue.3
, pp. 515-524
-
-
Ebert, M.S.1
Sharp, P.A.2
-
2
-
-
84892488302
-
Post-transcriptional regulation of wnt8a is essential to zebrafish axis development
-
PMID: 24333179
-
Wylie AD, Fleming JA, Whitener A.E., Lekven AC. Post-transcriptional regulation of wnt8a is essential to zebrafish axis development. Developmental biology. 2014; 386(1):53-63. doi:10.1016/j.ydbio.2013.12.003 PMID: 24333179.
-
(2014)
Developmental Biology.
, vol.386
, Issue.1
, pp. 53-63
-
-
Wylie, A.D.1
Fleming, J.A.2
Whitener, A.E.3
Lekven, A.C.4
-
3
-
-
84906260701
-
MyomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis
-
PMID: 25078649; PubMed Central PMCID: PMC4199139
-
Goljanek-Whysall K., Mok GF, Fahad Alrefaei A, Kennerley N, Wheeler G.N., Munsterberg A. myomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis. Development (Cambridge, England). 2014; 141(17):3378-87. doi:10.1242/dev.108787 PMID: 25078649; PubMed Central PMCID: PMC4199139.
-
(2014)
Development (Cambridge, England)
, vol.141
, Issue.17
, pp. 3378-3387
-
-
Goljanek-Whysall, K.1
Mok, G.F.2
Fahad Alrefaei, A.3
Kennerley, N.4
Wheeler, G.N.5
Munsterberg, A.6
-
4
-
-
8144225486
-
MicroRNA genes are transcribed by RNA polymerase II
-
PMID: 15372072
-
Lee Y, Kim M, Han J, Yeom KH, Lee S, Baek SH, et al. MicroRNA genes are transcribed by RNA polymerase II. The EMBO journal. 2004; 23(20):4051-60. PMID: 15372072.
-
(2004)
The EMBO Journal.
, vol.23
, Issue.20
, pp. 4051-4060
-
-
Lee, Y.1
Kim, M.2
Han, J.3
Yeom, K.H.4
Lee, S.5
Baek, S.H.6
-
5
-
-
0037009364
-
MicroRNA maturation: Stepwise processing and subcellular localization
-
PMID: 12198168
-
Lee Y, Jeon K, Lee J.T., Kim S., Kim VN. MicroRNA maturation: stepwise processing and subcellular localization. The EMBO journal. 2002; 21(17):4663-70. PMID: 12198168.
-
(2002)
The EMBO Journal.
, vol.21
, Issue.17
, pp. 4663-4670
-
-
Lee, Y.1
Jeon, K.2
Lee, J.T.3
Kim, S.4
Kim, V.N.5
-
6
-
-
0035800521
-
Acellularfunctionforthe RNA-interference enzyme dicer in the maturation of the let-7 small temporal RNA
-
PMID: 11452083
-
Hutvagner G, McLachlan J, Pasquinelli AE, Balint E, Tuschl T, Zamore PD. Acellularfunctionforthe RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science (New York, NY.) 2001; 293(5531):834-8. PMID: 11452083.
-
(2001)
Science (New York, NY.)
, vol.293
, Issue.5531
, pp. 834-838
-
-
Hutvagner, G.1
McLachlan, J.2
Pasquinelli, A.E.3
Balint, E.4
Tuschl, T.5
Zamore, P.D.6
-
7
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
PMID: 14744438
-
Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004; 116(2):281-97. PMID: 14744438.
-
(2004)
Cell.
, vol.116
, Issue.2
, pp. 281-297
-
-
Bartel, D.P.1
-
8
-
-
10244243802
-
Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences
-
PMID: 15217813
-
Bonnet E, Wuyts J, Rouze P., Van de Peer Y. Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinformatics (Oxford, England). 2004; 20(17):2911-7. PMID: 15217813.
-
(2004)
Bioinformatics (Oxford, England)
, vol.20
, Issue.17
, pp. 2911-2917
-
-
Bonnet, E.1
Wuyts, J.2
Rouze, P.3
Van De Peer, Y.4
-
9
-
-
4744357297
-
Structural features of microRNA (miRNA) precursors and their relevance to miRNA biogenesis and small interfering RNA/short hairpin RNA design
-
PMID: 15292246
-
Krol J, Sobczak K, Wilczynska U., Drath M, Jasinska A, Kaczynska D., et al. Structural features of microRNA (miRNA) precursors and their relevance to miRNA biogenesis and small interfering RNA/short hairpin RNA design. The Journal of biological chemistry. 2004; 279(40):42230-9. PMID: 15292246.
-
(2004)
The Journal of Biological Chemistry.
, vol.279
, Issue.40
, pp. 42230-42239
-
-
Krol, J.1
Sobczak, K.2
Wilczynska, U.3
Drath, M.4
Jasinska, A.5
Kaczynska, D.6
-
10
-
-
0346094457
-
Prediction of Mammalian microRNA targets
-
PMID: 14697198
-
Lewis BP, Shih IH, Jones-Rhoades MW, Bartel D.P., Burge CB. Prediction of mammalian microRNA targets. Cell. 2003; 115(7):787-98. PMID: 14697198.
-
(2003)
Cell.
, vol.115
, Issue.7
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
11
-
-
84862778053
-
Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish
-
PMID: 22422859; PubMed Central PMCID: PMC3547538
-
Bazzini AA, Lee MT, Giraldez AJ. Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish. Science. 2012; 336(6078):233-7. doi:10.1126/science.1215704 PMID: 22422859; PubMed Central PMCID: PMC3547538.
-
(2012)
Science
, vol.336
, Issue.6078
, pp. 233-237
-
-
Bazzini, A.A.1
Lee, M.T.2
Giraldez, A.J.3
-
12
-
-
84891796290
-
MiRTarBase update2014: An information resource for experimentally validated miRNA-target interactions
-
(Database issue) PMID: 24304892; PubMed Central PMCID: PMC3965058
-
Hsu SD, Tseng YT, Shrestha S, Lin YL, Khaleel A, Chou CH, et al. miRTarBase update2014: an information resource for experimentally validated miRNA-target interactions. Nucleic acids research. 2014; 42(Database issue):D78-85. doi:10.1093/nar/gkt1266 PMID: 24304892; PubMed Central PMCID: PMC3965058.
-
(2014)
Nucleic Acids Research.
, vol.42
, pp. D78-D85
-
-
Hsu, S.D.1
Tseng, Y.T.2
Shrestha, S.3
Lin, Y.L.4
Khaleel, A.5
Chou, C.H.6
-
13
-
-
79961079858
-
MicroRNA regulation of the paired-box transcription factor pax3 confers robustness to developmental timing of myogenesis
-
PMID: 21730146; PubMed Central PMCID: PMC3141954
-
Goljanek-Whysall K., Sweetman D, Abu-Elmagd M, Chapnik E, Dalmay T, Hornstein E, et al. MicroRNA regulation of the paired-box transcription factor Pax3 confers robustness to developmental timing of myogenesis. Proc Natl Acad Sci USA. 2011; 108(29):11936-41. doi:10.1073/pnas.1105362108 PMID: 21730146; PubMed Central PMCID: PMC3141954.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.29
, pp. 11936-11941
-
-
Goljanek-Whysall, K.1
Sweetman, D.2
Abu-Elmagd, M.3
Chapnik, E.4
Dalmay, T.5
Hornstein, E.6
-
14
-
-
84891818318
-
MiRBase: Annotating high confidence microRNAs using deep sequencing data
-
(Database issue) PMID: 24275495; PubMed Central PMCID: PMC3965103
-
Kozomara A, Griffiths-Jones S. miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic acids research. 2014; 42(Database issue):D68-73. doi:10.1093/nar/gkt1181 PMID: 24275495; PubMed Central PMCID: PMC3965103.
-
(2014)
Nucleic Acids Research.
, vol.42
, pp. D68-D73
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
15
-
-
0025187556
-
Localization of specific mRNAs in xenopus embryos by whole-mount in situ hybridization
-
PMID: 1723941
-
Hemmati-Brivanlou A., Frank D, Bolce M.E., Brown BD, Sive HL, Harland RM. Localization of specific mRNAs in Xenopus embryos by whole-mount in situ hybridization. Development (Cambridge, England). 1990; 110(2):325-30. PMID: 1723941.
-
(1990)
Development (Cambridge, England)
, vol.110
, Issue.2
, pp. 325-330
-
-
Hemmati-Brivanlou, A.1
Frank, D.2
Bolce, M.E.3
Brown, B.D.4
Sive, H.L.5
Harland, R.M.6
-
16
-
-
19944431653
-
Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags
-
PMID: 15590942; PubMed Central PMCID: PMC540287
-
Hubbard SJ, Grafham DV, Beattie K.J., Overton IM, McLaren SR, Croning MD, et al. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Genome research. 2005; 15(1):174-83. doi:10.1101/gr.3011405 PMID: 15590942; PubMed Central PMCID: PMC540287.
-
(2005)
Genome Research.
, vol.15
, Issue.1
, pp. 174-183
-
-
Hubbard, S.J.1
Grafham, D.V.2
Beattie, K.J.3
Overton, I.M.4
McLaren, S.R.5
Croning, M.D.6
-
17
-
-
22044458072
-
Micro-RNA expression in zebrafish embryonic development
-
PMID: 15919954
-
Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E., de Bruijn E, et al. Micro-RNA expression in zebrafish embryonic development. Science (New York, NY). 2005; 309(5732):310-1. PMID: 15919954.
-
(2005)
Science (New York, NY)
, vol.309
, Issue.5732
, pp. 310-311
-
-
Wienholds, E.1
Kloosterman, W.P.2
Miska, E.3
Alvarez-Saavedra, E.4
Berezikov, E.5
De Bruijn, E.6
-
18
-
-
33751011053
-
MicroRNA expression during chick embryo development
-
PMID: 17013880
-
Darnell DK, Kaur S, Stanislaw S, Konieczka JH, Yatskievych TA, Antin PB. MicroRNA expression during chick embryo development. Dev Dyn. 2006; 235(11):3156-65. PMID: 17013880.
-
(2006)
Dev Dyn.
, vol.235
, Issue.11
, pp. 3156-3165
-
-
Darnell, D.K.1
Kaur, S.2
Stanislaw, S.3
Konieczka, J.H.4
Yatskievych, T.A.5
Antin, P.B.6
-
19
-
-
51449101459
-
Specific requirements of MRFs for the expression of muscle specific microRNAs, miR-1, miR-206andmiR-133
-
PMID: 18619954
-
Sweetman D, Goljanek K, Rathjen T, Oustanina S, Braun T, Dalmay T, et al. Specific requirements of MRFs for the expression of muscle specific microRNAs, miR-1, miR-206andmiR-133. Developmental biology. 2008; 321(2):491-9. doi:10.1016/j.ydbio.2008.06.019 PMID: 18619954.
-
(2008)
Developmental Biology.
, vol.321
, Issue.2
, pp. 491-499
-
-
Sweetman, D.1
Goljanek, K.2
Rathjen, T.3
Oustanina, S.4
Braun, T.5
Dalmay, T.6
-
20
-
-
33746997457
-
FGF-4 signaling is involved in mir-206 expression in developing somites of chicken embryos
-
PMID: 16804893
-
Sweetman D, Rathjen T, Jefferson M, Wheeler G, Smith TG, Wheeler GN, et al. FGF-4 signaling is involved in mir-206 expression in developing somites of chicken embryos. Dev Dyn. 2006; 235 (8):2185-91. doi:10.1002/dvdy.20881 PMID: 16804893.
-
(2006)
Dev Dyn.
, vol.235
, Issue.8
, pp. 2185-2191
-
-
Sweetman, D.1
Rathjen, T.2
Jefferson, M.3
Wheeler, G.4
Smith, T.G.5
Wheeler, G.N.6
-
21
-
-
11844283981
-
Stage-specific expression of microRNAs during xenopus development
-
PMID: 15642338
-
Watanabe T, Takeda A, Mise K, Okuno T, Suzuki T, Minami N, et al. Stage-specific expression of microRNAs during Xenopus development. FEBS letters. 2005; 579(2):318-24. PMID: 15642338.
-
(2005)
FEBS Letters.
, vol.579
, Issue.2
, pp. 318-324
-
-
Watanabe, T.1
Takeda, A.2
Mise, K.3
Okuno, T.4
Suzuki, T.5
Minami, N.6
-
22
-
-
34548607471
-
MicroRNA control of nodal signalling
-
PMID: 17728715
-
Martello G, Zacchigna L, Inui M, Montagner M, Adorno M, Mamidi A, et al. MicroRNA control of Nodal signalling. Nature. 2007; 449(7159):183-8. PMID: 17728715.
-
(2007)
Nature.
, vol.449
, Issue.7159
, pp. 183-188
-
-
Martello, G.1
Zacchigna, L.2
Inui, M.3
Montagner, M.4
Adorno, M.5
Mamidi, A.6
-
23
-
-
70450203075
-
The miR-30 miRNA family regulates xenopus pronephros development and targets the transcription factor xlim1/Lhx1
-
PMID: 19906860; PubMed Central PMCID: PMC2778741
-
Agrawal R, Tran U, Wessely O. The miR-30 miRNA family regulates Xenopus pronephros development and targets the transcription factor Xlim1/Lhx1. Development (Cambridge, England). 2009; 136 (23):3927-36. doi:10.1242/dev.037432 PMID: 19906860; PubMed Central PMCID: PMC2778741.
-
(2009)
Development (Cambridge, England)
, vol.136
, Issue.23
, pp. 3927-3936
-
-
Agrawal, R.1
Tran, U.2
Wessely, O.3
-
24
-
-
46949084254
-
Expression of microRNAs during embryonic development of xenopus tropicalis
-
PMID: 18440877
-
Walker JC, Harland RM Expression of microRNAs during embryonic development of Xenopus tropicalis. Gene Expr Patterns. 2008; 8(6):452-6. PMID: 18440877. doi:10.1016/j.gep.2008.03.002
-
(2008)
Gene Expr Patterns.
, vol.8
, Issue.6
, pp. 452-456
-
-
Walker, J.C.1
Harland, R.M.2
-
25
-
-
84941048072
-
Xenbase, the xenopus model organism database; new virtualized system, data types and genomes
-
(Database issue) PMID: 25313157; PubMed Central PMCID: PMC4384024
-
Karpinka JB, Fortriede JD, Burns K.A., James-Zorn C, Ponferrada VG, Lee J, et al Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes. Nucleic acids research. 2015; 43(Database issue):D756-63. doi:10.1093/nar/gku956 PMID: 25313157; PubMed Central PMCID: PMC4384024.
-
(2015)
Nucleic Acids Research.
, vol.43
, pp. D756-D763
-
-
Karpinka, J.B.1
Fortriede, J.D.2
Burns, K.A.3
James-Zorn, C.4
Ponferrada, V.G.5
Lee, J.6
-
26
-
-
66349120459
-
Database of queryable gene expression patterns for xenopus
-
PMID: 19347954
-
Gilchrist MJ, Christensen MB, Bronchain O, Brunet F., Chesneau A, Fenger U, et al. Database of queryable gene expression patterns for Xenopus. Dev Dyn. 2009; 238(6):1379-88. doi:10.1002/dvdy.21940 PMID: 19347954.
-
(2009)
Dev Dyn.
, vol.238
, Issue.6
, pp. 1379-1388
-
-
Gilchrist, M.J.1
Christensen, M.B.2
Bronchain, O.3
Brunet, F.4
Chesneau, A.5
Fenger, U.6
-
27
-
-
4143113343
-
Matrix metalloproteinase genes in xenopus development
-
PMID: 15305302
-
Harrison M, Abu-Elmagd M, Grocott T., Yates C, Gavrilovic J, Wheeler GN Matrix metalloproteinase genes in Xenopus development. Dev Dyn. 2004; 231(1):214-20. PMID: 15305302.
-
(2004)
Dev Dyn.
, vol.231
, Issue.1
, pp. 214-220
-
-
Harrison, M.1
Abu-Elmagd, M.2
Grocott, T.3
Yates, C.4
Gavrilovic, J.5
Wheeler, G.N.6
-
29
-
-
84855510415
-
Detecting sRNAs by northern blotting
-
PMID: 21431703
-
Lopez-Gomollon S. Detecting sRNAs by Northern blotting. Methods in molecular biology (Clifton, NJ). 2011; 732:25-38. doi:10.1007/978-1-61779-083-63 PMID: 21431703.
-
(2011)
Methods in Molecular Biology (Clifton, NJ)
, vol.732
, pp. 25-38
-
-
Lopez-Gomollon, S.1
-
30
-
-
84865121074
-
The UEAsRNAworkbench: A suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets
-
PMID: 22628521; PubMed Central PMCID: PMC3400958
-
Stocks MB, Moxon S, Mapleson D., Woolfenden HC, Mohorianu I, Folkes L, et al The UEAsRNAworkbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets. Bioinformatics (Oxford, England). 2012; 28(15):2059-61. doi:10.1093/bioinformatics/bts311 PMID: 22628521; PubMed Central PMCID: PMC3400958.
-
(2012)
Bioinformatics (Oxford, England)
, vol.28
, Issue.15
, pp. 2059-2061
-
-
Stocks, M.B.1
Moxon, S.2
Mapleson, D.3
Woolfenden, H.C.4
Mohorianu, I.5
Folkes, L.6
-
31
-
-
82055164092
-
ViennaRNA package 2.0
-
PMID: 22115189; PubMed Central PMCID: PMC3319429
-
Lorenz R, Bernhart SH, HonerZu Siederdissen C, Tafer H, Flamm C., Stadler PF, et al. ViennaRNA Package 2.0. Algorithms for molecular biology: AMB. 2011; 6:26. doi:10.1186/1748-7188-6-26 PMID: 22115189; PubMed Central PMCID: PMC3319429.
-
(2011)
Algorithms for Molecular Biology: AMB
, vol.6
, pp. 26
-
-
Lorenz, R.1
Bernhart, S.H.2
Honer, Zu.3
Siederdissen, C.4
Tafer, H.5
Flamm, C.6
Stadler, P.F.7
-
32
-
-
38549100583
-
Xenbase: A xenopus biology and genomics resource
-
(Database issue) PMID: 17984085
-
Bowes JB, Snyder KA, Segerdell E, Gibb R., Jarabek C, Noumen E, et al. Xenbase: a Xenopus biology and genomics resource. Nucleic acids research. 2008; 36(Database issue):D761-7. PMID: 17984085.
-
(2008)
Nucleic Acids Research.
, vol.36
, pp. D761-D767
-
-
Bowes, J.B.1
Snyder, K.A.2
Segerdell, E.3
Gibb, R.4
Jarabek, C.5
Noumen, E.6
-
33
-
-
34147153781
-
Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2
-
PMID: 17397913
-
Zhao Y, Ransom JF, Li A, Vedantham V, von Drehle M, Muth AN, et al. Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2. Cell. 2007; 129(2):303-17. doi:10.1016/j.cell.2007.03.030 PMID: 17397913.
-
(2007)
Cell.
, vol.129
, Issue.2
, pp. 303-317
-
-
Zhao, Y.1
Ransom, J.F.2
Li, A.3
Vedantham, V.4
Von Drehle, M.5
Muth, A.N.6
-
34
-
-
84866518216
-
An anatomically comprehensive atlas of the adult human brain transcriptome
-
PMID: 22996553; PubMed Central PMCID: PMC4243026
-
Hawrylycz MJ, Lein ES, Guillozet-Bongaarts AL, Shen EH, Ng L, Miller JA, et al. An anatomically comprehensive atlas of the adult human brain transcriptome. Nature. 2012; 489(7416):391-9. doi:10.1038/nature11405 PMID: 22996553; PubMed Central PMCID: PMC4243026.
-
(2012)
Nature.
, vol.489
, Issue.7416
, pp. 391-399
-
-
Hawrylycz, M.J.1
Lein, E.S.2
Guillozet-Bongaarts, A.L.3
Shen, E.H.4
Ng, L.5
Miller, J.A.6
|