메뉴 건너뛰기




Volumn 94, Issue , 2016, Pages 618-625

Resolving taxonomic uncertainty and historical biogeographic patterns in Muscicapa flycatchers and their allies

Author keywords

Africa; Eurasia; Historical biogeography; Muscicapa; Muscicapidae; Systematics

Indexed keywords

AFRICA; ANIMAL; ASIA; BAYES THEOREM; CLASSIFICATION; ECOSYSTEM; EUROPE; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY; SONGBIRD; UNCERTAINTY;

EID: 84949035755     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2015.09.026     Document Type: Article
Times cited : (16)

References (46)
  • 1
    • 20444384776 scopus 로고    scopus 로고
    • Mitochondrial DNA sequences of the Afro-Arabian spiny-tailed lizards (genus Uromastyx; family Agamidae): phylogenetic analyses and evolution of gene arrangements
    • Amer S.A.M., Kumazawa Y. Mitochondrial DNA sequences of the Afro-Arabian spiny-tailed lizards (genus Uromastyx; family Agamidae): phylogenetic analyses and evolution of gene arrangements. Biol. J. Linn. Soc. 2005, 85:247-260.
    • (2005) Biol. J. Linn. Soc. , vol.85 , pp. 247-260
    • Amer, S.A.M.1    Kumazawa, Y.2
  • 2
    • 9944255059 scopus 로고    scopus 로고
    • Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards
    • Brandley M.C., Schmitz A., Reeder T.W. Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards. Syst. Biol. 2005, 54:373-390.
    • (2005) Syst. Biol. , vol.54 , pp. 373-390
    • Brandley, M.C.1    Schmitz, A.2    Reeder, T.W.3
  • 3
    • 37249003697 scopus 로고    scopus 로고
    • The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics
    • Brown J.M., Lemmon A.R. The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics. Syst. Biol. 2007, 56:643-655.
    • (2007) Syst. Biol. , vol.56 , pp. 643-655
    • Brown, J.M.1    Lemmon, A.R.2
  • 4
    • 0035837254 scopus 로고    scopus 로고
    • Closing of the Indonesian Seaway as a precursor to East African aridification around 3-4 million years ago
    • Cane M.A., Molnar P. Closing of the Indonesian Seaway as a precursor to East African aridification around 3-4 million years ago. Nature 2001, 411:157-162.
    • (2001) Nature , vol.411 , pp. 157-162
    • Cane, M.A.1    Molnar, P.2
  • 5
    • 3042698700 scopus 로고    scopus 로고
    • Assessing the passerine "Tapestry": phylogenetic relationships of the Muscicapoidea inferred from nuclear DNA sequences
    • Cibois A., Cracraft J. Assessing the passerine "Tapestry": phylogenetic relationships of the Muscicapoidea inferred from nuclear DNA sequences. Mol. Phylogenet. Evol. 2004, 32:264-273.
    • (2004) Mol. Phylogenet. Evol. , vol.32 , pp. 264-273
    • Cibois, A.1    Cracraft, J.2
  • 6
    • 0022189995 scopus 로고
    • The evolution of avian migration systems between temperate and tropical regions of the New World
    • Cox G. The evolution of avian migration systems between temperate and tropical regions of the New World. Am. Nat. 1985, 126:451-474.
    • (1985) Am. Nat. , vol.126 , pp. 451-474
    • Cox, G.1
  • 10
    • 29144489363 scopus 로고    scopus 로고
    • Biomarker records of late Neogene changes in northeast African vegetation
    • Feakins S.J., de Menocal P.B., Eglinton T.I. Biomarker records of late Neogene changes in northeast African vegetation. Geology 2005, 33:977-980.
    • (2005) Geology , vol.33 , pp. 977-980
    • Feakins, S.J.1    de Menocal, P.B.2    Eglinton, T.I.3
  • 11
    • 50849096704 scopus 로고    scopus 로고
    • New perspectives on the origin and diversification of Africa's forest avifauna
    • Fjeldså J., Bowie R.C.K. New perspectives on the origin and diversification of Africa's forest avifauna. Afr. J. Ecol. 2008, 46:235-247.
    • (2008) Afr. J. Ecol. , vol.46 , pp. 235-247
    • Fjeldså, J.1    Bowie, R.C.K.2
  • 12
    • 79955517056 scopus 로고    scopus 로고
    • Diversification across an altitudinal gradient in the tiny greenbul (Phyllastrephus debilis) from the Eastern Arc Mountains of Africa
    • Fuchs J., Fjeldså J., Bowie R.C.K. Diversification across an altitudinal gradient in the tiny greenbul (Phyllastrephus debilis) from the Eastern Arc Mountains of Africa. BMC Evol. Biol. 2011, 11:117.
    • (2011) BMC Evol. Biol. , vol.11 , pp. 117
    • Fuchs, J.1    Fjeldså, J.2    Bowie, R.C.K.3
  • 13
    • 0002297456 scopus 로고
    • History of climate and forests in tropical Africa during the last 8 million years
    • Hamilton A.C., Taylor D. History of climate and forests in tropical Africa during the last 8 million years. Clim. Change 1991, 19:65-78.
    • (1991) Clim. Change , vol.19 , pp. 65-78
    • Hamilton, A.C.1    Taylor, D.2
  • 14
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 15
    • 33745093501 scopus 로고    scopus 로고
    • Determining biogeographical patterns of dispersal and diversification in oscine passerine birds in Australia, Southeast Asia and Africa
    • Jønsson K.A., Fjeldså J. Determining biogeographical patterns of dispersal and diversification in oscine passerine birds in Australia, Southeast Asia and Africa. J. Biogeogr. 2006, 33:1155-1165.
    • (2006) J. Biogeogr. , vol.33 , pp. 1155-1165
    • Jønsson, K.A.1    Fjeldså, J.2
  • 16
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: improvements in performance and usability
    • Katoh S. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 2013, 30:772-780.
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 772-780
    • Katoh, S.1
  • 17
    • 80755128987 scopus 로고    scopus 로고
    • Multilocus resolution of phylogeny and timescale in the extant adaptive radiation of Hawaiian honeycreepers
    • Lerner H.R.L., Meyer M., James H.F., Hofreiter M., Fleischer R.C. Multilocus resolution of phylogeny and timescale in the extant adaptive radiation of Hawaiian honeycreepers. Curr. Biol. 2011, 21:1838-1844.
    • (2011) Curr. Biol. , vol.21 , pp. 1838-1844
    • Lerner, H.R.L.1    Meyer, M.2    James, H.F.3    Hofreiter, M.4    Fleischer, R.C.5
  • 18
    • 84862651583 scopus 로고    scopus 로고
    • The partitioning of Africa: statistically defined biogeographical regions in sub-Saharan Africa
    • Linder H.P., de Klerk H.M., Born J., Burgess N.D., Fjeldså J., Rahbek C. The partitioning of Africa: statistically defined biogeographical regions in sub-Saharan Africa. J. Biogeogr. 2012, 39:1189-1205.
    • (2012) J. Biogeogr. , vol.39 , pp. 1189-1205
    • Linder, H.P.1    de Klerk, H.M.2    Born, J.3    Burgess, N.D.4    Fjeldså, J.5    Rahbek, C.6
  • 19
    • 84896339272 scopus 로고    scopus 로고
    • Probabilistic Historical Biogeography: New Models for Founder-Event Speciation, Imperfect Detection, and Fossils Allow Improved Accuracy and Model-Testing
    • Ph.D. Thesis, University of California, Berkeley.
    • Matzke, N.J., 2013a. Probabilistic Historical Biogeography: New Models for Founder-Event Speciation, Imperfect Detection, and Fossils Allow Improved Accuracy and Model-Testing. Ph.D. Thesis, University of California, Berkeley.
    • (2013)
    • Matzke, N.J.1
  • 20
    • 84896331312 scopus 로고    scopus 로고
    • BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
    • CRAN: The Comprehensive R Archive Network, Berkeley, California
    • Matzke, N.J., 2013b. BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts. CRAN: The Comprehensive R Archive Network, Berkeley, California. http://cran.r-project.org/web/packages/BioGeoBEARS/index.html.
    • (2013)
    • Matzke, N.J.1
  • 24
    • 34249103566 scopus 로고    scopus 로고
    • Molecular systematics and historical biogeography of the Rock-Thrushes (Muscicapidae: Monticola)
    • Outlaw R.K., Voelker G., Outlaw D.C. Molecular systematics and historical biogeography of the Rock-Thrushes (Muscicapidae: Monticola). Auk 2007, 124:561-577.
    • (2007) Auk , vol.124 , pp. 561-577
    • Outlaw, R.K.1    Voelker, G.2    Outlaw, D.C.3
  • 25
    • 71949084343 scopus 로고    scopus 로고
    • When continents collide: phylogeny, historical biogeography and systematics of the medically important viper genus Echis (Squamata: Serpentes: Viperidae)
    • Pook C.E., Joger U., Stümpel N., Wüster W. When continents collide: phylogeny, historical biogeography and systematics of the medically important viper genus Echis (Squamata: Serpentes: Viperidae). Mol. Phylogenet. Evol. 2009, 53:792-807.
    • (2009) Mol. Phylogenet. Evol. , vol.53 , pp. 792-807
    • Pook, C.E.1    Joger, U.2    Stümpel, N.3    Wüster, W.4
  • 26
    • 83655191908 scopus 로고    scopus 로고
    • Monitors cross the Red Sea: the biogeographic history of Varanus yemenensis
    • Portik D.M., Papenfuss T.J. Monitors cross the Red Sea: the biogeographic history of Varanus yemenensis. Mol. Phylogenet. Evol. 2012, 62:561-565.
    • (2012) Mol. Phylogenet. Evol. , vol.62 , pp. 561-565
    • Portik, D.M.1    Papenfuss, T.J.2
  • 27
    • 84938808573 scopus 로고    scopus 로고
    • Historical biogeography resolves the origins of endemic Arabian toad lineages (Anura: Bufonidae): evidence for ancient vicariance and dispersal events with the Horn of Africa and South Asia
    • Portik D.M., Papenfuss T.J. Historical biogeography resolves the origins of endemic Arabian toad lineages (Anura: Bufonidae): evidence for ancient vicariance and dispersal events with the Horn of Africa and South Asia. BMC Evol. Biol. 2015, 15:152.
    • (2015) BMC Evol. Biol. , vol.15 , pp. 152
    • Portik, D.M.1    Papenfuss, T.J.2
  • 28
    • 77949524886 scopus 로고    scopus 로고
    • FigTree
    • Distributed by the Author
    • Rambault, A., 2008. FigTree. Distributed by the Author http://tree.bio.ed.ad.uk/software/figtree/.
    • (2008)
    • Rambault, A.1
  • 30
    • 47749135700 scopus 로고    scopus 로고
    • Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis
    • Ree R.H., Smith S.A. Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Syst. Biol. 2008, 57:4-14.
    • (2008) Syst. Biol. , vol.57 , pp. 4-14
    • Ree, R.H.1    Smith, S.A.2
  • 31
    • 77956227788 scopus 로고    scopus 로고
    • Multi-locus phylogenetic analysis of Old World chats and flycatchers reveals extensive paraphyly at family, subfamily and genus level (Aves: Muscicapidae)
    • Sangster G., Alström P., Porsmark E., Olsson U. Multi-locus phylogenetic analysis of Old World chats and flycatchers reveals extensive paraphyly at family, subfamily and genus level (Aves: Muscicapidae). Mol. Phylogenet. Evol. 2010, 57:380-392.
    • (2010) Mol. Phylogenet. Evol. , vol.57 , pp. 380-392
    • Sangster, G.1    Alström, P.2    Porsmark, E.3    Olsson, U.4
  • 34
    • 84878319865 scopus 로고    scopus 로고
    • Out of Arabia: a complex biogeographic history of multiple vicariance and dispersal events in the Gecko genus Hemidactylus (Reptilia: Gekkonidae)
    • Šmíd J., Carranza S., Kratochvíl L., Gvoždík V., Nasher A.K., Moravec J. Out of Arabia: a complex biogeographic history of multiple vicariance and dispersal events in the Gecko genus Hemidactylus (Reptilia: Gekkonidae). PLoS One 2013, 8(5):e64018.
    • (2013) PLoS One , vol.8 , Issue.5 , pp. e64018
    • Šmíd, J.1    Carranza, S.2    Kratochvíl, L.3    Gvoždík, V.4    Nasher, A.K.5    Moravec, J.6
  • 35
    • 77953162984 scopus 로고    scopus 로고
    • Family Muscicapidae (Old World Flycatchers)
    • del Hoyo, J., Elliott, A., Christie, D.A. (Eds.), Handbook of Birds of the World, vol. 11. Lynx Edicions, Barcelona, Spain
    • Taylor, P.B., 2006. Family Muscicapidae (Old World Flycatchers). In: del Hoyo, J., Elliott, A., Christie, D.A. (Eds.), Handbook of Birds of the World, vol. 11. Lynx Edicions, Barcelona, Spain, pp. 56-163.
    • (2006) , pp. 56-163
    • Taylor, P.B.1
  • 36
    • 79958265462 scopus 로고    scopus 로고
    • Palaeoclimatic events, dispersal and migratory losses along the Afro-European axis as drivers of biogeographic distribution in Sylvia warblers
    • Voelker G., Light J.E. Palaeoclimatic events, dispersal and migratory losses along the Afro-European axis as drivers of biogeographic distribution in Sylvia warblers. BMC Evol. Biol. 2011, 11:163.
    • (2011) BMC Evol. Biol. , vol.11 , pp. 163
    • Voelker, G.1    Light, J.E.2
  • 37
    • 54049083531 scopus 로고    scopus 로고
    • Establishing a perimeter position: thrush speciation around the Indian Ocean Basin
    • Voelker G., Outlaw R.K. Establishing a perimeter position: thrush speciation around the Indian Ocean Basin. J. Evol. Biol. 2008, 21:1779-1788.
    • (2008) J. Evol. Biol. , vol.21 , pp. 1779-1788
    • Voelker, G.1    Outlaw, R.K.2
  • 38
    • 0842287933 scopus 로고    scopus 로고
    • Nuclear and mitochondrial DNA evidence of polyphyly in the avian superfamily Muscicapoidea
    • Voelker G., Spellman G.M. Nuclear and mitochondrial DNA evidence of polyphyly in the avian superfamily Muscicapoidea. Mol. Phylogenet. Evol. 2004, 30:386-394.
    • (2004) Mol. Phylogenet. Evol. , vol.30 , pp. 386-394
    • Voelker, G.1    Spellman, G.M.2
  • 39
    • 67849134915 scopus 로고    scopus 로고
    • A Gulf of Guinea island endemic is a member of a Mediterranean-centered bird genus
    • Voelker G., Melo M., Bowie R.C.K. A Gulf of Guinea island endemic is a member of a Mediterranean-centered bird genus. Ibis 2009, 151:580-583.
    • (2009) Ibis , vol.151 , pp. 580-583
    • Voelker, G.1    Melo, M.2    Bowie, R.C.K.3
  • 40
    • 72449200596 scopus 로고    scopus 로고
    • Pliocene forest dynamics as a primary driver of African bird speciation
    • Voelker G., Outlaw R.K., Bowie R.C.K. Pliocene forest dynamics as a primary driver of African bird speciation. Global Ecol. Biogeogr. 2010, 19:111-121.
    • (2010) Global Ecol. Biogeogr. , vol.19 , pp. 111-121
    • Voelker, G.1    Outlaw, R.K.2    Bowie, R.C.K.3
  • 41
    • 84859295586 scopus 로고    scopus 로고
    • Phylogenetic relationships and speciation patterns in an African savanna dwelling bird genus (Myrmecocichla)
    • Voelker G., Bowie R.C.K., Wilson B., Anderson C. Phylogenetic relationships and speciation patterns in an African savanna dwelling bird genus (Myrmecocichla). Biol. J. Linn. Soc. 2012, 106:180-190.
    • (2012) Biol. J. Linn. Soc. , vol.106 , pp. 180-190
    • Voelker, G.1    Bowie, R.C.K.2    Wilson, B.3    Anderson, C.4
  • 42
    • 84896331702 scopus 로고    scopus 로고
    • Diversification in an Afro-Asian songbird clade reveals founder-event speciation via trans-oceanic dispersals and a southern to northern colonization pattern in Africa
    • Voelker G., Peñalba J.V., Huntley J.W., Bowie R.C.K. Diversification in an Afro-Asian songbird clade reveals founder-event speciation via trans-oceanic dispersals and a southern to northern colonization pattern in Africa. Mol. Phylogenet. Evol. 2014, 73:97-105.
    • (2014) Mol. Phylogenet. Evol. , vol.73 , pp. 97-105
    • Voelker, G.1    Peñalba, J.V.2    Huntley, J.W.3    Bowie, R.C.K.4
  • 43
    • 79952055329 scopus 로고    scopus 로고
    • Homoplasy: from detecting pattern to determining process and mechanism of evolution
    • Wake D.B., Wake M.H., Specht C.D. Homoplasy: from detecting pattern to determining process and mechanism of evolution. Science 2011, 331:1032-1035.
    • (2011) Science , vol.331 , pp. 1032-1035
    • Wake, D.B.1    Wake, M.H.2    Specht, C.D.3
  • 44
    • 43049101093 scopus 로고    scopus 로고
    • Calibrating the avian molecular clock
    • Weir J.T., Schluter D. Calibrating the avian molecular clock. Mol. Ecol. 2008, 17:2321-2328.
    • (2008) Mol. Ecol. , vol.17 , pp. 2321-2328
    • Weir, J.T.1    Schluter, D.2
  • 45
    • 79951604304 scopus 로고    scopus 로고
    • Phylogeography of the African helmeted terrapin, Pelomedusa subrufa: genetic structure, dispersal, and human introduction
    • Wong R.A., Fong J.J., Papenfuss T.J. Phylogeography of the African helmeted terrapin, Pelomedusa subrufa: genetic structure, dispersal, and human introduction. Proc. Cal. Acad. Sci. 2010, 61:575-585.
    • (2010) Proc. Cal. Acad. Sci. , vol.61 , pp. 575-585
    • Wong, R.A.1    Fong, J.J.2    Papenfuss, T.J.3
  • 46
    • 77953157793 scopus 로고    scopus 로고
    • A multi-gene phylogeny disentangles the chat-flycatcher complex (Aves: Muscicapidae)
    • Zuccon D., Ericson P.G.P. A multi-gene phylogeny disentangles the chat-flycatcher complex (Aves: Muscicapidae). Zool. Scr. 2010, 39:213-224.
    • (2010) Zool. Scr. , vol.39 , pp. 213-224
    • Zuccon, D.1    Ericson, P.G.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.