Rapid detection of subtype H10N8 influenza virus by one-step reverse transcription-loop-mediated isothermal amplification methods

Journal of Clinical Microbiology

Volumn 53, Issue 12, 2015, Pages 3884-3887

  Bao, Hongmei ^a   Feng, Xiaoxiao ^a   Ma, Yong ^a   Shi, Jianzhong ^a   Zhao, Yuhui ^a   Gu, Linlin ^a   Wang, Xiurong ^a   Chen, Hualan ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHICKEN; CONTROLLED STUDY; GENE SEQUENCE; INFLUENZA A VIRUS (H10N8); LIMIT OF DETECTION; NONHUMAN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION LOOP MEDIATED ISOTHERMAL AMPLIFICATION; SENSITIVITY AND SPECIFICITY; SEQUENCE HOMOLOGY; VIRUS DETECTION; VIRUS GENE; VIRUS ISOLATION; VIRUS STRAIN; ANIMAL; GENETICS; INFLUENZA IN BIRDS; ISOLATION AND PURIFICATION; NUCLEIC ACID AMPLIFICATION; PROCEDURES; REVERSE TRANSCRIPTION; TEMPERATURE; TIME FACTOR; VIROLOGY;

INFLUENZA VIRUS HEMAGGLUTININ; NA PROTEIN, INFLUENZA A VIRUS; SIALIDASE; VIRAL PROTEIN;

ANIMALS; CHICKENS; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; INFLUENZA A VIRUS, H10N8 SUBTYPE; INFLUENZA IN BIRDS; NEURAMINIDASE; NUCLEIC ACID AMPLIFICATION TECHNIQUES; REVERSE TRANSCRIPTION; SENSITIVITY AND SPECIFICITY; TEMPERATURE; TIME FACTORS; VIRAL PROTEINS;

EID: 84947759584     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02165-15     Document Type: Article

References (17)

1. De Marco MA, Campitelli L, Foni E, Raffini E, Barigazzi G, Delogu M, Guberti V, Di Trani L, Tollis M, Donatelli I. (2004). Influenza surveillance in birds in Italian wetlands (1992-1998): is there a host restricted circulation of influenza viruses in sympatric ducks and coots? Vet Microbiol 98: 197-208. http://dx.doi.org/10.1016/j.vetmic.2003.10.018
2. Zhang H, Xu B, Chen Q, Chen J, Chen Z. (2011). Characterization of an H10N8 influenza virus isolated from Dongting Lake wetland. Virol J 8: 42. http://dx.doi.org/10.1186/1743-422X-8-42
3. Su S, Qi W, Zhou P, Xiao C, Yan Z, Cui J, Jia K, Zhang G, Gray GC, Liao M, Li S. (2014). First evidence of H10N8 avian influenza virus infections among feral dogs in live poultry markets in Guangdong Province, China. Clin Infect Dis 59: 748-750. http://dx.doi.org/10.1093/cid/ciu345
4. Chen H, Yuan H, Gao R, Zhang J, Wang D, Xiong Y, Fan G, Yang F, Li X, Zhou J, Zou S, Yang L, Chen T, Dong L, Bo H, Zhao X, Zhang Y, Lan Y, Bai T, Dong J, Li Q, Wang S, Zhang Y, Li H, Gong T, Shi Y, Ni X, Li J, Zhou J, Fan J, Wu J, Zhou X, Hu M, Wan J, Yang W, Li D, Wu G, Feng Z, Gao GF, Wang Y, Jin Q, Liu M, Shu Y. (2014). Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection: a descriptive study. Lancet 383: 714-721. http://dx.doi.org/10.1016/S0140-6736(14)60111-2
5. Shi J, Deng G, Liu P, Zhou J, Guan L, Li W, Li X, Guo J, Wang G, Fan J, Wang J, Li Y, Jiang Y, Liu L, Tian G, Li C, Chen H. (2013). Isolation and characterization of H7N9 viruses from live poultry markets-implication of the source of current H7N9 infection in humans. Chin Sci Bull 58: 1857-1863. http://dx.doi.org/10.1007/s11434-013-5873-4
6. Chen Y, Liang W, Yang S, Wu N, Gao H, Sheng J, Yao H, Wo J, Fang Q, Cui D, Li Y, Yao X, Zhang Y, Wu H, Zheng H, Diao S, Xia S, Zhang Y, Chan KH, Tsoi HW, Teng JL, Song W, Wang P, Lau SY, Zheng M, Chan JF, To KK, Chen H, Li L, Yuen KY. (2013). Human infections with the emerging avian influenza A H7N9 virus from wet market poultry: clinical analysis and characterisation of viral genome. Lancet 381: 1916-1925. http://dx.doi.org/10.1016/S0140-6736(13)60903-4
7. Yu H, Wu JT, Cowling BJ, Liao Q, Fang VJ, Zhou S, Wu P, Zhou H, Lau EH, Guo D, Ni MY, Peng Z, Feng L, Jiang H, Luo H, Li Q, Feng Z, Wang Y, Yang W, Leung GM. (2014). Effect of closure of live poultry markets on poultry-to-person transmission of avian influenza A H7N9 virus: an ecological study. Lancet 383: 541-548. http://dx.doi.org/10.1016/S0140-6736(13)61904-2
8. Deng G, Shi J, Wang J, Kong H, Cui P, Zhang F, Tan D, Suzuki Y, Liu L, Jiang Y, Guan Y, Chen H. (2015). Genetics, receptor binding, and virulence in mice of H10N8 influenza viruses isolated from ducks and chickens in live poultry markets in China. J Virol 89: 6506-6510. http://dx.doi.org/10.1128/JVI.00017-15
9. Wan XF, Dong L, Lan Y, Long LP, Xu C, Zou S, Li Z, Wen L, Cai Z, Wang W, Li X, Yuan F, Sui H, Zhang Y, Dong J, Sun S, Gao Y, Wang M, Bai T, Yang L, Li D, Yang W, Yu H, Wang S, Feng Z, Wang Y, Guo Y, Webby RJ, Shu Y. (2011). Indications that live poultry markets are a major source of human H5N1 influenza virus infection in China. J Virol 85: 13432-13438. http://dx.doi.org/10.1128/JVI.05266-11
10. Liu M, Li X, Yuan H, Zhou J, Wu J, Bo H, Xia W, Xiong Y, Yang L, Gao R, Guo J, Huang W, Zhang Y, Zhao X, Zou X, Chen T, Wang D, Li Q, Wang S, Chen S, Hu M, Ni X, Gong T, Shi Y, Li J, Zhou J, Cai J, Xiao Z, Zhang W, Sun J, Li D, Wu G, Feng Z, Wang Y, Chen H, Shu Y. (2015). Genetic diversity of avian influenza A (H10N8) virus in live poultry markets and its association with human infections in China. Sci Rep 5: 7632. http://dx.doi.org/10.1038/srep07632
11. Zhang T, Bi Y, Tian H, Li X, Liu D, Wu Y, Jin T, Wang Y, Chen Q, Chen Z, Chang J, Gao GF, Xu B. (2014). Human infection with influenza virus A (H10N8) from live poultry markets, China, 2014. Emerg Infect Dis 20: 2076-2079. http://dx.doi.org/10.3201/eid2012.140911
12. Ni X, He F, Hu M, Zhou X, Wang B, Feng C, Wu Y, Li Y, Tu J, Li H, Liu M, Chen H, Chen S. (2015). Investigation of avian influenza virus in poultry and wild birds due to novel avian-origin influenza A (H10N8) in Nanchang City, China. Microbes Infect 17: 48-53. http://dx.doi.org/10.1016/j.micinf.2014.09.007
13. Kubo T, Agoh M, Mai le Q, Fukushima K, Nishimura H, Yamaguchi A, Hirano M, Yoshikawa A, Hasebe F, Kohno S, Morita K. (2010). Development of a reverse transcription-loop-mediated isothermal amplification assay for detection of pandemic (H1N1) 2009 virus as a novel molecular method for diagnosis of pandemic influenza in resource-limited settings. J Clin Microbiol 48: 728-735. http://dx.doi.org/10.1128/JCM.01481-09
14. Bao H, Zhao Y, Wang Y, Xu X, Shi J, Zeng X, Wang X, Chen H. (2014). Development of a reverse transcription loop-mediated isothermal amplification method for the rapid detection of subtype H7N9 avian influenza virus. Biomed Res Int 2014: 525064. http://dx.doi.org/10.1155/2014/525064
15. Zhang J, Feng Y, Hu D, Lv H, Zhu J, Cao M, Zheng F, Zhu J, Gong X, Hao L, Srinivas S, Ren H, Qi Z, Li B, Wang C. (2013). Rapid and sensitive detection of H7N9 avian influenza virus by use of reverse transcription-loop-mediated isothermal amplification. J Clin Microbiol 51: 3760-3764. http://dx.doi.org/10.1128/JCM.01907-13
16. Imai M, Ninomiya A, Minekawa H, Notomi T, Ishizaki T, Van Tu P, Tien NT, Tashiro M, Odagiri T. (2007). Rapid diagnosis of H5N1 avian influenza virus infection by newly developed influenza H5 hemagglutinin gene-specific loop-mediated isothermal amplification method. J Virol Methods 141: 173-180. http://dx.doi.org/10.1016/j.jviromet.2006.12.004
17. Chen HT, Zhang J, Sun DH, Ma LN, Liu XT, Cai XP, Liu YS. (2008). Development of reverse transcription loop-mediated isothermal amplification for rapid detection of H9 avian influenza virus. J Virol Methods 151: 200-203. http://dx.doi.org/10.1016/j.jviromet.2008.05.009