A DNA shape-based regulatory score improves position-weight matrix-based recognition of transcription factor binding sites

Bioinformatics

Volumn 31, Issue 21, 2015, Pages 3445-3450

  Yang, Jichen ^a   Ramsey, Stephen A ^a,b  

^a OREGON STATE UNIVERSITY   (United States)

^b Oregon State University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; PROTEIN BINDING; TRANSCRIPTION FACTOR;

BINDING SITE; BIOLOGY; CHEMISTRY; GENE EXPRESSION REGULATION; HUMAN; METABOLISM; POSITION WEIGHT MATRIX; PROCEDURES; SOFTWARE; THEORETICAL MODEL;

BINDING SITES; COMPUTATIONAL BIOLOGY; DNA; GENE EXPRESSION REGULATION; HUMANS; MODELS, THEORETICAL; POSITION-SPECIFIC SCORING MATRICES; PROTEIN BINDING; SOFTWARE; TRANSCRIPTION FACTORS;

EID: 84947594540     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btv391     Document Type: Article

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