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Volumn 10, Issue 10, 2015, Pages

Re-Annotator: Annotation pipeline for microarray probe sequences

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

EID: 84947264827     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0139516     Document Type: Article
Times cited : (75)

References (13)
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    • Schurmann C, Heim K, Schillert A, Blankenberg S, Carstensen M, Dörr M, et al. (2012) Analyzing illumina gene expression microarray data from different tissues: methodological aspects of data analysis in the metaxpress consortium. PLoS One 7: e50938. doi: 10.1371/journal.pone.0050938
    • (2012) PLoS One , vol.7 , pp. e50938
    • Schurmann, C.1    Heim, K.2    Schillert, A.3    Blankenberg, S.4    Carstensen, M.5    Dörr, M.6
  • 5
    • 84864326252 scopus 로고    scopus 로고
    • Genomic dark matter: The reliability of short read mapping illustrated by the genome mappability score
    • Lee H, Schatz MC (2012) Genomic dark matter: the reliability of short read mapping illustrated by the genome mappability score. Bioinformatics 28: 2097-2105. doi: 10.1093/bioinformatics/bts330
    • (2012) Bioinformatics , vol.28 , pp. 2097-2105
    • Lee, H.1    Schatz, M.C.2
  • 6
    • 78651447845 scopus 로고    scopus 로고
    • The uniqueome: A mappability resource for short-tag sequencing
    • Koehler R, Issac H, Cloonan N, Grimmond SM (2011) The uniqueome: a mappability resource for short-tag sequencing. Bioinformatics 27: 272-274. doi: 10.1093/bioinformatics/btq640
    • (2011) Bioinformatics , vol.27 , pp. 272-274
    • Koehler, R.1    Issac, H.2    Cloonan, N.3    Grimmond, S.M.4
  • 8
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760. doi: 10.1093/bioinformatics/btp324
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 10
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: Functional annotation of genetic variants from highthroughput sequencing data
    • Wang K, Li M, Hakonarson H (2010) ANNOVAR: functional annotation of genetic variants from highthroughput sequencing data. Nucleic Acids Res 38: e164. doi: 10.1093/nar/gkq603
    • (2011) Nucleic Acids Res , vol.38 , pp. e164
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 12
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    • An integrated map of genetic variation from 1, 092 human genomes
    • The 1000 Genomes Project Consortium
    • The 1000 Genomes Project Consortium (2012) An integrated map of genetic variation from 1, 092 human genomes. Nature 491: 56-65. doi: 10.1038/nature11632
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  • 13
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    • Model-based variance-stabilizing transformation for Illumina microarray data
    • Lin SM, Du P, Huber W, Kibbe WA (2008) Model-based variance-stabilizing transformation for Illumina microarray data. Nucleic Acids Res 36: e11. doi: 10.1093/nar/gkm1075
    • (2008) Nucleic Acids Res , vol.36 , pp. e11
    • Lin, S.M.1    Du, P.2    Huber, W.3    Kibbe, W.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.