-
2
-
-
0027517868
-
Bacillus cereus and related species
-
1:STN:280:DyaK2c%2FpsVWqsg%3D%3D 8269390 358292
-
Drobniewski FA. Bacillus cereus and related species. Clin Microbiol Rev. 1993;6(4):324-38.
-
(1993)
Clin Microbiol Rev
, vol.6
, Issue.4
, pp. 324-338
-
-
Drobniewski, F.A.1
-
3
-
-
33646699589
-
Cereulide synthetase gene cluster from emetic Bacillus cereus: structure and location on a mega virulence plasmid related to Bacillus anthracis toxin plasmid pXO1
-
16512902 1459170
-
Ehling-Schulz M, Fricker M, Grallert H, Rieck P, Wagner M, Scherer S. Cereulide synthetase gene cluster from emetic Bacillus cereus: structure and location on a mega virulence plasmid related to Bacillus anthracis toxin plasmid pXO1. BMC Microbiol. 2006;6:20.
-
(2006)
BMC Microbiol
, vol.6
, pp. 20
-
-
Ehling-Schulz, M.1
Fricker, M.2
Grallert, H.3
Rieck, P.4
Wagner, M.5
Scherer, S.6
-
4
-
-
0030791570
-
Characterization of Bacillus thuringiensis isolated from infections in burn wounds
-
1:CAS:528:DyaK2sXjslKlsbg%3D 9215586
-
Damgaard PH, Granum PE, Bresciani J, Torregrossa MV, Eilenberg J, Valentino L. Characterization of Bacillus thuringiensis isolated from infections in burn wounds. FEMS Immunol Med Microbiol. 1997;18(1):47-53.
-
(1997)
FEMS Immunol Med Microbiol
, vol.18
, Issue.1
, pp. 47-53
-
-
Damgaard, P.H.1
Granum, P.E.2
Bresciani, J.3
Torregrossa, M.V.4
Eilenberg, J.5
Valentino, L.6
-
5
-
-
67649908917
-
Nosocomial bacteremia caused by biofilm-forming Bacillus cereus and Bacillus thuringiensis
-
19443973
-
Kuroki R, Kawakami K, Qin L, Kaji C, Watanabe K, Kimura Y, et al. Nosocomial bacteremia caused by biofilm-forming Bacillus cereus and Bacillus thuringiensis. Intern Med. 2009;48(10):791-6.
-
(2009)
Intern Med
, vol.48
, Issue.10
, pp. 791-796
-
-
Kuroki, R.1
Kawakami, K.2
Qin, L.3
Kaji, C.4
Watanabe, K.5
Kimura, Y.6
-
7
-
-
2942614873
-
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax
-
1:CAS:528:DC%2BD2cXkvFOmtr0%3D 15155910 420414
-
Hoffmaster AR, Ravel J, Rasko DA, Chapman GD, Chute MD, Marston CK, et al. Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax. Proc Natl Acad Sci U S A. 2004;101(22):8449-54.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, Issue.22
, pp. 8449-8454
-
-
Hoffmaster, A.R.1
Ravel, J.2
Rasko, D.A.3
Chapman, G.D.4
Chute, M.D.5
Marston, C.K.6
-
8
-
-
84928914504
-
Capsules, toxins and AtxA as virulence factors of emerging Bacillus cereus Biovar anthracis
-
25830379 4382292
-
Brezillon C, Haustant M, Dupke S, Corre JP, Lander A, Franz T, et al. Capsules, toxins and AtxA as virulence factors of emerging Bacillus cereus Biovar anthracis. PLoS Negl Trop Dis. 2015;9(4), e0003455.
-
(2015)
PLoS Negl Trop Dis
, vol.9
, Issue.4
-
-
Brezillon, C.1
Haustant, M.2
Dupke, S.3
Corre, J.P.4
Lander, A.5
Franz, T.6
-
9
-
-
0031783680
-
Bacillus weihenstephanensis sp. nov. is a new psychrotolerant species of the Bacillus cereus group
-
1:STN:280:DyaK1M%2FksFykuw%3D%3D 9828439
-
Lechner S, Mayr R, Francis KP, Pruss BM, Kaplan T, Wiessner-Gunkel E, et al. Bacillus weihenstephanensis sp. nov. is a new psychrotolerant species of the Bacillus cereus group. Int J Syst Bacteriol. 1998;48 Pt 4:1373-82.
-
(1998)
Int J Syst Bacteriol
, vol.484
, pp. 1373-1382
-
-
Lechner, S.1
Mayr, R.2
Francis, K.P.3
Pruss, B.M.4
Kaplan, T.5
Wiessner-Gunkel, E.6
-
10
-
-
33746095023
-
Characterization of emetic Bacillus weihenstephanensis, a new cereulide-producing bacterium
-
1:CAS:528:DC%2BD28XnsVaqtbY%3D 16820519 1489381
-
Thorsen L, Hansen BM, Nielsen KF, Hendriksen NB, Phipps RK, Budde BB. Characterization of emetic Bacillus weihenstephanensis, a new cereulide-producing bacterium. Appl Environ Microbiol. 2006;72(7):5118-21.
-
(2006)
Appl Environ Microbiol
, vol.72
, Issue.7
, pp. 5118-5121
-
-
Thorsen, L.1
Hansen, B.M.2
Nielsen, K.F.3
Hendriksen, N.B.4
Phipps, R.K.5
Budde, B.B.6
-
11
-
-
70449099903
-
Family portrait of Bacillus cereus and Bacillus weihenstephanensis cereulide-producing strains
-
1:CAS:528:DC%2BD1MXotlalsbc%3D 23765791
-
Hoton FM, Fornelos N, N'Guessan E, Hu X, Swiecicka I, Dierick K, et al. Family portrait of Bacillus cereus and Bacillus weihenstephanensis cereulide-producing strains. Environ Microbiol Rep. 2009;1(3):177-83.
-
(2009)
Environ Microbiol Rep
, vol.1
, Issue.3
, pp. 177-183
-
-
Hoton, F.M.1
Fornelos, N.2
N'Guessan, E.3
Hu, X.4
Swiecicka, I.5
Dierick, K.6
-
12
-
-
0025875752
-
Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA
-
1:CAS:528:DyaK3MXmtVartrY%3D 1715736
-
Ash C, Farrow JA, Dorsch M, Stackebrandt E, Collins MD. Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA. Int J Syst Bacteriol. 1991;41(3):343-6.
-
(1991)
Int J Syst Bacteriol
, vol.41
, Issue.3
, pp. 343-346
-
-
Ash, C.1
Farrow, J.A.2
Dorsch, M.3
Stackebrandt, E.4
Collins, M.D.5
-
13
-
-
0028843602
-
Clarification of the taxonomy of Bacillus mycoides
-
Nakamura LK, Jackson MA. Clarification of the taxonomy of Bacillus mycoides. Int J Syst Bacteriol. 1995;45(1):4.
-
(1995)
Int J Syst Bacteriol
, vol.45
, Issue.1
, pp. 4
-
-
Nakamura, L.K.1
Jackson, M.A.2
-
14
-
-
0033016408
-
Detection of toxigenic strains of Bacillus cereus and other Bacillus spp. with an improved cytotoxicity assay
-
1:STN:280:DyaK1M3ht1GjtA%3D%3D 10196773
-
Beattie SH, Williams AG. Detection of toxigenic strains of Bacillus cereus and other Bacillus spp. with an improved cytotoxicity assay. Lett Appl Microbiol. 1999;28(3):221-5.
-
(1999)
Lett Appl Microbiol
, vol.28
, Issue.3
, pp. 221-225
-
-
Beattie, S.H.1
Williams, A.G.2
-
15
-
-
0031857298
-
Bacillus pseudomycoides sp. nov
-
1:STN:280:DyaK1cvgsVGksw%3D%3D 9734060
-
Nakamura LK. Bacillus pseudomycoides sp. nov. Int J Syst Bacteriol. 1998;48 Pt 3:1031-5.
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 1031-1035
-
-
Nakamura, L.K.1
-
16
-
-
84872479278
-
Bacillus cytotoxicus sp. nov. is a novel thermotolerant species of the Bacillus cereus Group occasionally associated with food poisoning
-
22328607
-
Guinebretiere MH, Auger S, Galleron N, Contzen M, De Sarrau B, De Buyser ML, et al. Bacillus cytotoxicus sp. nov. is a novel thermotolerant species of the Bacillus cereus Group occasionally associated with food poisoning. Int J Syst Evol Microbiol. 2013;63(Pt 1):31-40.
-
(2013)
Int J Syst Evol Microbiol
, vol.63
, pp. 31-40
-
-
Guinebretiere, M.H.1
Auger, S.2
Galleron, N.3
Contzen, M.4
De Sarrau, B.5
De Buyser, M.L.6
-
17
-
-
84881665892
-
Description of Bacillus toyonensis sp. nov., a novel species of the Bacillus cereus group, and pairwise genome comparisons of the species of the group by means of ANI calculations
-
23791203
-
Jimenez G, Urdiain M, Cifuentes A, Lopez-Lopez A, Blanch AR, Tamames J, et al. Description of Bacillus toyonensis sp. nov., a novel species of the Bacillus cereus group, and pairwise genome comparisons of the species of the group by means of ANI calculations. Syst Appl Microbiol. 2013;36(6):383-91.
-
(2013)
Syst Appl Microbiol
, vol.36
, Issue.6
, pp. 383-391
-
-
Jimenez, G.1
Urdiain, M.2
Cifuentes, A.3
Lopez-Lopez, A.4
Blanch, A.R.5
Tamames, J.6
-
18
-
-
84890630720
-
Microbial genomic taxonomy
-
24365132 3879651
-
Thompson CC, Chimetto L, Edwards RA, Swings J, Stackebrandt E, Thompson FL. Microbial genomic taxonomy. BMC Genomics. 2013;14:913.
-
(2013)
BMC Genomics
, vol.14
, pp. 913
-
-
Thompson, C.C.1
Chimetto, L.2
Edwards, R.A.3
Swings, J.4
Stackebrandt, E.5
Thompson, F.L.6
-
19
-
-
84893511241
-
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
-
1:CAS:528:DC%2BC2cXhtlClsr7I 24505072
-
Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol. 2014;64(Pt 2):346-51.
-
(2014)
Int J Syst Evol Microbiol
, vol.64
, pp. 346-351
-
-
Kim, M.1
Oh, H.S.2
Park, S.C.3
Chun, J.4
-
20
-
-
40949101356
-
Ecological diversification in the Bacillus cereus Group
-
1:CAS:528:DC%2BD1cXkvVensbo%3D 18036180
-
Guinebretiere MH, Thompson FL, Sorokin A, Normand P, Dawyndt P, Ehling-Schulz M, et al. Ecological diversification in the Bacillus cereus Group. Environ Microbiol. 2008;10(4):851-65.
-
(2008)
Environ Microbiol
, vol.10
, Issue.4
, pp. 851-865
-
-
Guinebretiere, M.H.1
Thompson, F.L.2
Sorokin, A.3
Normand, P.4
Dawyndt, P.5
Ehling-Schulz, M.6
-
21
-
-
0034040861
-
Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis - one species on the basis of genetic evidence
-
1:CAS:528:DC%2BD3cXjvFWnsb4%3D 10831447 110590
-
Helgason E, Okstad OA, Caugant DA, Johansen HA, Fouet A, Mock M, et al. Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis - one species on the basis of genetic evidence. Appl Environ Microbiol. 2000;66(6):2627-30.
-
(2000)
Appl Environ Microbiol
, vol.66
, Issue.6
, pp. 2627-2630
-
-
Helgason, E.1
Okstad, O.A.2
Caugant, D.A.3
Johansen, H.A.4
Fouet, A.5
Mock, M.6
-
22
-
-
70449129949
-
Sympatric soil communities of Bacillus cereus sensu lato: population structure and potential plasmid dynamics of pXO1- and pXO2-like elements
-
1:CAS:528:DC%2BD1MXhsFaqsLjF 19780824
-
Hu X, Swiecicka I, Timmery S, Mahillon J. Sympatric soil communities of Bacillus cereus sensu lato: population structure and potential plasmid dynamics of pXO1- and pXO2-like elements. FEMS Microbiol Ecol. 2009;70(3):344-55.
-
(2009)
FEMS Microbiol Ecol
, vol.70
, Issue.3
, pp. 344-355
-
-
Hu, X.1
Swiecicka, I.2
Timmery, S.3
Mahillon, J.4
-
23
-
-
66249114025
-
Distribution, diversity, and potential mobility of extrachromosomal elements related to the Bacillus anthracis pXO1 and pXO2 virulence plasmids
-
1:CAS:528:DC%2BD1MXmsFWis78%3D 19304837 2681636
-
Hu X, Van der Auwera G, Timmery S, Zhu L, Mahillon J. Distribution, diversity, and potential mobility of extrachromosomal elements related to the Bacillus anthracis pXO1 and pXO2 virulence plasmids. Appl Environ Microbiol. 2009;75(10):3016-28.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.10
, pp. 3016-3028
-
-
Hu, X.1
Van Der Auwera, G.2
Timmery, S.3
Zhu, L.4
Mahillon, J.5
-
24
-
-
68949183127
-
Cereulide formation by Bacillus weihenstephanensis and mesophilic emetic Bacillus cereus at temperature abuse depends on pre-incubation conditions
-
1:CAS:528:DC%2BD1MXhtVentLvM 19428136
-
Thorsen L, Budde BB, Henrichsen L, Martinussen T, Jakobsen M. Cereulide formation by Bacillus weihenstephanensis and mesophilic emetic Bacillus cereus at temperature abuse depends on pre-incubation conditions. Int J Food Microbiol. 2009;134(1-2):133-9.
-
(2009)
Int J Food Microbiol
, vol.134
, Issue.1-2
, pp. 133-139
-
-
Thorsen, L.1
Budde, B.B.2
Henrichsen, L.3
Martinussen, T.4
Jakobsen, M.5
-
25
-
-
0040881550
-
Transfer of Bacillus thuringiensis plasmids coding for delta-endotoxin among strains of B. thuringiensis and B. cereus
-
1:CAS:528:DyaL3sXhtV2h 6294667 347252
-
Gonzalez Jr JM, Brown BJ, Carlton BC. Transfer of Bacillus thuringiensis plasmids coding for delta-endotoxin among strains of B. thuringiensis and B. cereus. Proc Natl Acad Sci U S A. 1982;79(22):6951-5.
-
(1982)
Proc Natl Acad Sci U S A
, vol.79
, Issue.22
, pp. 6951-6955
-
-
Gonzalez, J.M.1
Brown, B.J.2
Carlton, B.C.3
-
26
-
-
0031816556
-
Genetic diversity of Bacillus cereus/B. thuringiensis isolates from natural sources
-
1:CAS:528:DyaK1cXkvF2qt7k%3D 9662607
-
Helgason E, Caugant DA, Lecadet MM, Chen Y, Mahillon J, Lovgren A, et al. Genetic diversity of Bacillus cereus/B. thuringiensis isolates from natural sources. Curr Microbiol. 1998;37(2):80-7.
-
(1998)
Curr Microbiol
, vol.37
, Issue.2
, pp. 80-87
-
-
Helgason, E.1
Caugant, D.A.2
Lecadet, M.M.3
Chen, Y.4
Mahillon, J.5
Lovgren, A.6
-
27
-
-
4544251398
-
Population structure of the Bacillus cereus group as determined by sequence analysis of six housekeeping genes and the plcR Gene
-
1:CAS:528:DC%2BD2cXnt1Chs7s%3D 15322020 517475
-
Ko KS, Kim JW, Kim JM, Kim W, Chung SI, Kim IJ, et al. Population structure of the Bacillus cereus group as determined by sequence analysis of six housekeeping genes and the plcR Gene. Infect Immun. 2004;72(9):5253-61.
-
(2004)
Infect Immun
, vol.72
, Issue.9
, pp. 5253-5261
-
-
Ko, K.S.1
Kim, J.W.2
Kim, J.M.3
Kim, W.4
Chung, S.I.5
Kim, I.J.6
-
28
-
-
38949208031
-
Multiple-locus sequence typing and analysis of toxin genes in Bacillus cereus food-borne isolates
-
1:CAS:528:DC%2BD1cXhvVWjs78%3D 18083872 2227710
-
Cardazzo B, Negrisolo E, Carraro L, Alberghini L, Patarnello T, Giaccone V. Multiple-locus sequence typing and analysis of toxin genes in Bacillus cereus food-borne isolates. Appl Environ Microbiol. 2008;74(3):850-60.
-
(2008)
Appl Environ Microbiol
, vol.74
, Issue.3
, pp. 850-860
-
-
Cardazzo, B.1
Negrisolo, E.2
Carraro, L.3
Alberghini, L.4
Patarnello, T.5
Giaccone, V.6
-
29
-
-
33646245694
-
Pathogenomic sequence analysis of Bacillus cereus and Bacillus thuringiensis isolates closely related to Bacillus anthracis
-
16621833 1447445
-
Han CS, Xie G, Challacombe JF, Altherr MR, Bhotika SS, Brown N, et al. Pathogenomic sequence analysis of Bacillus cereus and Bacillus thuringiensis isolates closely related to Bacillus anthracis. J Bacteriol. 2006;188(9):3382-90.
-
(2006)
J Bacteriol
, vol.188
, Issue.9
, pp. 3382-3390
-
-
Han, C.S.1
Xie, G.2
Challacombe, J.F.3
Altherr, M.R.4
Bhotika, S.S.5
Brown, N.6
-
30
-
-
0035488914
-
Fluorescent amplified fragment length polymorphism analysis of Norwegian Bacillus cereus and Bacillus thuringiensis soil isolates
-
1:CAS:528:DC%2BD3MXns1WitLs%3D 11571195 93242
-
Ticknor LO, Kolsto AB, Hill KK, Keim P, Laker MT, Tonks M, et al. Fluorescent amplified fragment length polymorphism analysis of Norwegian Bacillus cereus and Bacillus thuringiensis soil isolates. Appl Environ Microbiol. 2001;67(10):4863-73.
-
(2001)
Appl Environ Microbiol
, vol.67
, Issue.10
, pp. 4863-4873
-
-
Ticknor, L.O.1
Kolsto, A.B.2
Hill, K.K.3
Keim, P.4
Laker, M.T.5
Tonks, M.6
-
31
-
-
0346500439
-
Multilocus sequence typing scheme for bacteria of the Bacillus cereus group
-
1:CAS:528:DC%2BD2cXmvFahsQ%3D%3D 14711642 321270
-
Helgason E, Tourasse NJ, Meisal R, Caugant DA, Kolsto AB. Multilocus sequence typing scheme for bacteria of the Bacillus cereus group. Appl Environ Microbiol. 2004;70(1):191-201.
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.1
, pp. 191-201
-
-
Helgason, E.1
Tourasse, N.J.2
Meisal, R.3
Caugant, D.A.4
Kolsto, A.B.5
-
32
-
-
33144459447
-
Multiple-locus sequence typing analysis of Bacillus cereus and Bacillus thuringiensis reveals separate clustering and a distinct population structure of psychrotrophic strains
-
1:CAS:528:DC%2BD28Xhs1Ghurg%3D 16461712 1392946
-
Sorokin A, Candelon B, Guilloux K, Galleron N, Wackerow-Kouzova N, Ehrlich SD, et al. Multiple-locus sequence typing analysis of Bacillus cereus and Bacillus thuringiensis reveals separate clustering and a distinct population structure of psychrotrophic strains. Appl Environ Microbiol. 2006;72(2):1569-78.
-
(2006)
Appl Environ Microbiol
, vol.72
, Issue.2
, pp. 1569-1578
-
-
Sorokin, A.1
Candelon, B.2
Guilloux, K.3
Galleron, N.4
Wackerow-Kouzova, N.5
Ehrlich, S.D.6
-
33
-
-
0035546223
-
Detection of lateral gene transfer among microbial genomes
-
1:CAS:528:DC%2BD3MXnslajt7k%3D 11682304
-
Ragan MA. Detection of lateral gene transfer among microbial genomes. Curr Opin Genet Dev. 2001;11(6):620-6.
-
(2001)
Curr Opin Genet Dev
, vol.11
, Issue.6
, pp. 620-626
-
-
Ragan, M.A.1
-
34
-
-
0036145420
-
Reconciling the many faces of lateral gene transfer
-
1:CAS:528:DC%2BD38Xntlaguw%3D%3D 11755071
-
Lawrence JG, Ochman H. Reconciling the many faces of lateral gene transfer. Trends Microbiol. 2002;10(1):1-4.
-
(2002)
Trends Microbiol
, vol.10
, Issue.1
, pp. 1-4
-
-
Lawrence, J.G.1
Ochman, H.2
-
35
-
-
84936990249
-
From genome to toxicity: a combinatory approach highlights the complexity of enterotoxin production in Bacillus cereus
-
Jeßberger N, Krey VM, Rademacher C, Böhm M-E, Mohr A-K, Ehling Schulz M, et al. From genome to toxicity: a combinatory approach highlights the complexity of enterotoxin production in Bacillus cereus. Front Microbiol. 2015;6.
-
(2015)
Front Microbiol
, pp. 6
-
-
Jeßberger, N.1
Krey, V.M.2
Rademacher, C.3
Böhm, M.-E.4
Mohr, A.-K.5
Ehling Schulz, M.6
-
36
-
-
0034466656
-
Characterization of Bacillus species used for oral bacteriotherapy and bacterioprophylaxis of gastrointestinal disorders
-
1:CAS:528:DC%2BD3MXjsVyhurs%3D 11097897 92451
-
Hoa NT, Baccigalupi L, Huxham A, Smertenko A, Van PH, Ammendola S, et al. Characterization of Bacillus species used for oral bacteriotherapy and bacterioprophylaxis of gastrointestinal disorders. Appl Environ Microbiol. 2000;66(12):5241-7.
-
(2000)
Appl Environ Microbiol
, vol.66
, Issue.12
, pp. 5241-5247
-
-
Hoa, N.T.1
Baccigalupi, L.2
Huxham, A.3
Smertenko, A.4
Van, P.H.5
Ammendola, S.6
-
37
-
-
85008429800
-
Draft genome sequence of Bacillus cytotoxicus CVUAS 2833, a very close relative to type strain NVH 391-98 isolated from a different location
-
Böhm M-E, Huptas C, Krey VM, Scherer S. Draft genome sequence of Bacillus cytotoxicus CVUAS 2833, a very close relative to type strain NVH 391-98 isolated from a different location. Genome Announc 2015, 3(4). pii: e00901-15. doi: 10.1128/genomeA.00901-15
-
Genome Announc 2015
, vol.3
, Issue.4
-
-
Böhm, M.-E.1
Huptas, C.2
Krey, V.M.3
Scherer, S.4
-
38
-
-
58149492429
-
Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes
-
1:CAS:528:DC%2BD1MXoslCiu74%3D 18978059 2612427
-
Novichkov PS, Wolf YI, Dubchak I, Koonin EV. Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes. J Bacteriol. 2009;191(1):65-73.
-
(2009)
J Bacteriol
, vol.191
, Issue.1
, pp. 65-73
-
-
Novichkov, P.S.1
Wolf, Y.I.2
Dubchak, I.3
Koonin, E.V.4
-
39
-
-
33747139299
-
The Bacillus cereus group: novel aspects of population structure and genome dynamics
-
1:CAS:528:DC%2BD28XhtVyqu7rJ 16907808
-
Tourasse NJ, Helgason E, Okstad OA, Hegna IK, Kolsto AB. The Bacillus cereus group: novel aspects of population structure and genome dynamics. J Appl Microbiol. 2006;101(3):579-93.
-
(2006)
J Appl Microbiol
, vol.101
, Issue.3
, pp. 579-593
-
-
Tourasse, N.J.1
Helgason, E.2
Okstad, O.A.3
Hegna, I.K.4
Kolsto, A.B.5
-
40
-
-
3843054732
-
Use of 16S rRNA, 23S rRNA, and gyrB gene sequence analysis to determine phylogenetic relationships of Bacillus cereus group microorganisms
-
1:CAS:528:DC%2BD2cXnt1Ogtbg%3D 15297521 497648
-
Bavykin SG, Lysov YP, Zakhariev V, Kelly JJ, Jackman J, Stahl DA, et al. Use of 16S rRNA, 23S rRNA, and gyrB gene sequence analysis to determine phylogenetic relationships of Bacillus cereus group microorganisms. J Clin Microbiol. 2004;42(8):3711-30.
-
(2004)
J Clin Microbiol
, vol.42
, Issue.8
, pp. 3711-3730
-
-
Bavykin, S.G.1
Lysov, Y.P.2
Zakhariev, V.3
Kelly, J.J.4
Jackman, J.5
Stahl, D.A.6
-
41
-
-
79956306395
-
HyperCAT: an extension of the SuperCAT database for global multi-scheme and multi-datatype phylogenetic analysis of the Bacillus cereus group population
-
20651034 2997605
-
Tourasse NJ, Okstad OA, Kolsto AB. HyperCAT: an extension of the SuperCAT database for global multi-scheme and multi-datatype phylogenetic analysis of the Bacillus cereus group population. Database. 2010;2010:baq017.
-
(2010)
Database
, vol.2010
, pp. baq017
-
-
Tourasse, N.J.1
Okstad, O.A.2
Kolsto, A.B.3
-
42
-
-
73149098333
-
Shifting the genomic gold standard for the prokaryotic species definition
-
1:CAS:528:DC%2BD1MXhsFGlsbbK 19855009 2776425
-
Richter M, Rossello-Mora R. Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci U S A. 2009;106(45):19126-31.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.45
, pp. 19126-19131
-
-
Richter, M.1
Rossello-Mora, R.2
-
43
-
-
33846555715
-
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
-
1:CAS:528:DC%2BD2sXitFGgs78%3D 17220447
-
Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P, Tiedje JM. DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. Int J Syst Evol Microbiol. 2007;57(Pt 1):81-91.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 81-91
-
-
Goris, J.1
Konstantinidis, K.T.2
Klappenbach, J.A.3
Coenye, T.4
Vandamme, P.5
Tiedje, J.M.6
-
44
-
-
0031665470
-
Discrimination of psychrotrophic and mesophilic strains of the Bacillus cereus group by PCR targeting of major cold shock protein genes
-
1:CAS:528:DyaK1cXmtVajtbk%3D 9726910 106760
-
Francis KP, Mayr R, von Stetten F, Stewart GS, Scherer S. Discrimination of psychrotrophic and mesophilic strains of the Bacillus cereus group by PCR targeting of major cold shock protein genes. Appl Environ Microbiol. 1998;64(9):3525-9.
-
(1998)
Appl Environ Microbiol
, vol.64
, Issue.9
, pp. 3525-3529
-
-
Francis, K.P.1
Mayr, R.2
Von Stetten, F.3
Stewart, G.S.4
Scherer, S.5
-
45
-
-
33845393658
-
Hemolytic and nonhemolytic enterotoxin genes are broadly distributed among Bacillus thuringiensis isolated from wild mammals
-
16944343
-
Swiecicka I, Van der Auwera GA, Mahillon J. Hemolytic and nonhemolytic enterotoxin genes are broadly distributed among Bacillus thuringiensis isolated from wild mammals. Microb Ecol. 2006;52(3):544-51.
-
(2006)
Microb Ecol
, vol.52
, Issue.3
, pp. 544-551
-
-
Swiecicka, I.1
Van Der Auwera, G.A.2
Mahillon, J.3
-
46
-
-
0036702151
-
Enterotoxigenic profiles of food-poisoning and food-borne Bacillus cereus strains
-
1:CAS:528:DC%2BD38Xms1ejsLs%3D 12149378 120679
-
Guinebretiere MH, Broussolle V, Nguyen-The C. Enterotoxigenic profiles of food-poisoning and food-borne Bacillus cereus strains. J Clin Microbiol. 2002;40(8):3053-6.
-
(2002)
J Clin Microbiol
, vol.40
, Issue.8
, pp. 3053-3056
-
-
Guinebretiere, M.H.1
Broussolle, V.2
Nguyen-The, C.3
-
47
-
-
0032695865
-
Sequence analysis of three Bacillus cereus loci carrying PIcR-regulated genes encoding degradative enzymes and enterotoxin
-
1:CAS:528:DyaK1MXnsVGgu7s%3D 10589720
-
Okstad OA, Gominet M, Purnelle B, Rose M, Lereclus D, Kolsto AB. Sequence analysis of three Bacillus cereus loci carrying PIcR-regulated genes encoding degradative enzymes and enterotoxin. Microbiology. 1999;145(Pt 11):3129-38.
-
(1999)
Microbiology
, vol.145
, pp. 3129-3138
-
-
Okstad, O.A.1
Gominet, M.2
Purnelle, B.3
Rose, M.4
Lereclus, D.5
Kolsto, A.B.6
-
48
-
-
44849109513
-
From soil to gut: Bacillus cereus and its food poisoning toxins
-
1:CAS:528:DC%2BD1cXotVyht7c%3D 18422617
-
Stenfors Arnesen LP, Fagerlund A, Granum PE. From soil to gut: Bacillus cereus and its food poisoning toxins. FEMS Microbiol Rev. 2008;32(4):579-606.
-
(2008)
FEMS Microbiol Rev
, vol.32
, Issue.4
, pp. 579-606
-
-
Stenfors Arnesen, L.P.1
Fagerlund, A.2
Granum, P.E.3
-
49
-
-
27644472372
-
Orthologs, paralogs, and evolutionary genomics
-
1:CAS:528:DC%2BD28Xlt1WrsQ%3D%3D 16285863
-
Koonin EV. Orthologs, paralogs, and evolutionary genomics. Annu Rev Genet. 2005;39:309-38.
-
(2005)
Annu Rev Genet
, vol.39
, pp. 309-338
-
-
Koonin, E.V.1
-
50
-
-
0034080213
-
Tripartite haemolysin BL: isolation and characterization of two distinct homologous sets of components from a single Bacillus cereus isolate
-
1:CAS:528:DC%2BD3cXktlWmtrw%3D 10846215
-
Beecher DJ, Wong AC. Tripartite haemolysin BL: isolation and characterization of two distinct homologous sets of components from a single Bacillus cereus isolate. Microbiology. 2000;146(Pt 6):1371-80.
-
(2000)
Microbiology
, vol.146
, pp. 1371-1380
-
-
Beecher, D.J.1
Wong, A.C.2
-
51
-
-
0042736000
-
Insertional inactivation of hblC encoding the L2 component of Bacillus cereus ATCC 14579 haemolysin BL strongly reduces enterotoxigenic activity, but not the haemolytic activity against human erythrocytes
-
1:CAS:528:DyaK1MXnsVGgu7g%3D 10589721
-
Lindback T, Okstad OA, Rishovd AL, Kolsto AB. Insertional inactivation of hblC encoding the L2 component of Bacillus cereus ATCC 14579 haemolysin BL strongly reduces enterotoxigenic activity, but not the haemolytic activity against human erythrocytes. Microbiology. 1999;145(Pt 11):3139-46.
-
(1999)
Microbiology
, vol.145
, pp. 3139-3146
-
-
Lindback, T.1
Okstad, O.A.2
Rishovd, A.L.3
Kolsto, A.B.4
-
52
-
-
0033027329
-
PlcR is a pleiotropic regulator of extracellular virulence factor gene expression in Bacillus thuringiensis
-
1:CAS:528:DyaK1MXjvVSmsLo%3D 10361306
-
Agaisse H, Gominet M, Okstad OA, Kolsto AB, Lereclus D. PlcR is a pleiotropic regulator of extracellular virulence factor gene expression in Bacillus thuringiensis. Mol Microbiol. 1999;32(5):1043-53.
-
(1999)
Mol Microbiol
, vol.32
, Issue.5
, pp. 1043-1053
-
-
Agaisse, H.1
Gominet, M.2
Okstad, O.A.3
Kolsto, A.B.4
Lereclus, D.5
-
53
-
-
0033745098
-
A new cytotoxin from Bacillus cereus that may cause necrotic enteritis
-
1:CAS:528:DC%2BD3cXotVGqt7s%3D 11069652
-
Lund T, De Buyser ML, Granum PE. A new cytotoxin from Bacillus cereus that may cause necrotic enteritis. Mol Microbiol. 2000;38(2):254-61.
-
(2000)
Mol Microbiol
, vol.38
, Issue.2
, pp. 254-261
-
-
Lund, T.1
De Buyser, M.L.2
Granum, P.E.3
-
54
-
-
4444289197
-
Genetic and functional analysis of the cytK family of genes in Bacillus cereus
-
1:CAS:528:DC%2BD2cXntValu74%3D 15289565
-
Fagerlund A, Ween O, Lund T, Hardy SP, Granum PE. Genetic and functional analysis of the cytK family of genes in Bacillus cereus. Microbiology. 2004;150(Pt 8):2689-97.
-
(2004)
Microbiology
, vol.150
, pp. 2689-2697
-
-
Fagerlund, A.1
Ween, O.2
Lund, T.3
Hardy, S.P.4
Granum, P.E.5
-
55
-
-
51349141263
-
The PlcR virulence regulon of Bacillus cereus
-
18665214 2464732
-
Gohar M, Faegri K, Perchat S, Ravnum S, Okstad OA, Gominet M, et al. The PlcR virulence regulon of Bacillus cereus. PLoS One. 2008;3(7), e2793.
-
(2008)
PLoS One
, vol.3
, Issue.7
-
-
Gohar, M.1
Faegri, K.2
Perchat, S.3
Ravnum, S.4
Okstad, O.A.5
Gominet, M.6
-
56
-
-
0037009447
-
A cell-cell signaling peptide activates the PlcR virulence regulon in bacteria of the Bacillus cereus group
-
1:CAS:528:DC%2BD38Xms1Knu7k%3D 12198157 126190
-
Slamti L, Lereclus D. A cell-cell signaling peptide activates the PlcR virulence regulon in bacteria of the Bacillus cereus group. The EMBO journal. 2002;21(17):4550-9.
-
(2002)
The EMBO journal
, vol.21
, Issue.17
, pp. 4550-4559
-
-
Slamti, L.1
Lereclus, D.2
-
57
-
-
2442681702
-
Distinct mutations in PlcR explain why some strains of the Bacillus cereus group are nonhemolytic
-
1:CAS:528:DC%2BD2cXks1Cqt7w%3D 15150241 415780
-
Slamti L, Perchat S, Gominet M, Vilas-Boas G, Fouet A, Mock M, et al. Distinct mutations in PlcR explain why some strains of the Bacillus cereus group are nonhemolytic. J Bacteriol. 2004;186(11):3531-8.
-
(2004)
J Bacteriol
, vol.186
, Issue.11
, pp. 3531-3538
-
-
Slamti, L.1
Perchat, S.2
Gominet, M.3
Vilas-Boas, G.4
Fouet, A.5
Mock, M.6
-
58
-
-
77955410062
-
The genome of a Bacillus isolate causing anthrax in chimpanzees combines chromosomal properties of B. cereus with B. anthracis virulence plasmids
-
20634886 2901330
-
Klee SR, Brzuszkiewicz EB, Nattermann H, Bruggemann H, Dupke S, Wollherr A, et al. The genome of a Bacillus isolate causing anthrax in chimpanzees combines chromosomal properties of B. cereus with B. anthracis virulence plasmids. PLoS One. 2010;5(7):e10986.
-
(2010)
PLoS One
, vol.5
, Issue.7
-
-
Klee, S.R.1
Brzuszkiewicz, E.B.2
Nattermann, H.3
Bruggemann, H.4
Dupke, S.5
Wollherr, A.6
-
59
-
-
36749085970
-
Structure of PlcR: insights into virulence regulation and evolution of quorum sensing in gram-positive bacteria
-
1:CAS:528:DC%2BD2sXhtl2ku7vP 17998541 2141804
-
Declerck N, Bouillaut L, Chaix D, Rugani N, Slamti L, Hoh F, et al. Structure of PlcR: insights into virulence regulation and evolution of quorum sensing in gram-positive bacteria. Proc Natl Acad Sci U S A. 2007;104(47):18490-5.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.47
, pp. 18490-18495
-
-
Declerck, N.1
Bouillaut, L.2
Chaix, D.3
Rugani, N.4
Slamti, L.5
Hoh, F.6
-
60
-
-
34249985210
-
Toxin production in a rare and genetically remote cluster of strains of the Bacillus cereus group
-
17517121 1888693
-
Fagerlund A, Brillard J, Furst R, Guinebretiere MH, Granum PE. Toxin production in a rare and genetically remote cluster of strains of the Bacillus cereus group. BMC Microbiol. 2007;7:43.
-
(2007)
BMC Microbiol
, vol.7
, pp. 43
-
-
Fagerlund, A.1
Brillard, J.2
Furst, R.3
Guinebretiere, M.H.4
Granum, P.E.5
-
61
-
-
77956644756
-
Cytotoxicity of the Bacillus cereus Nhe enterotoxin requires specific binding order of its three exoprotein components
-
1:CAS:528:DC%2BC3cXhtF2qsbjE 20624910 2937446
-
Lindback T, Hardy SP, Dietrich R, Sodring M, Didier A, Moravek M, et al. Cytotoxicity of the Bacillus cereus Nhe enterotoxin requires specific binding order of its three exoprotein components. Infect Immun. 2010;78(9):3813-21.
-
(2010)
Infect Immun
, vol.78
, Issue.9
, pp. 3813-3821
-
-
Lindback, T.1
Hardy, S.P.2
Dietrich, R.3
Sodring, M.4
Didier, A.5
Moravek, M.6
-
62
-
-
84859444351
-
Inhibition of cytotoxicity by the Nhe cytotoxin of Bacillus cereus through the interaction of dodecyl maltoside with the NheB component
-
1:CAS:528:DC%2BC38XmslOgtL4%3D 22385099
-
Phung D, Granum PE, Dietrich R, Martlbauer E, Hardy SP. Inhibition of cytotoxicity by the Nhe cytotoxin of Bacillus cereus through the interaction of dodecyl maltoside with the NheB component. FEMS Microbiol Lett. 2012;330(2):98-104.
-
(2012)
FEMS Microbiol Lett
, vol.330
, Issue.2
, pp. 98-104
-
-
Phung, D.1
Granum, P.E.2
Dietrich, R.3
Martlbauer, E.4
Hardy, S.P.5
-
63
-
-
84876975134
-
Complex formation between NheB and NheC is necessary to induce cytotoxic activity by the three-component Bacillus cereus Nhe enterotoxin
-
1:CAS:528:DC%2BC3sXnsFWru78%3D 23646182 3639968
-
Heilkenbrinker U, Dietrich R, Didier A, Zhu K, Lindback T, Granum PE, et al. Complex formation between NheB and NheC is necessary to induce cytotoxic activity by the three-component Bacillus cereus Nhe enterotoxin. PLoS One. 2013;8(4), e63104.
-
(2013)
PLoS One
, vol.8
, Issue.4
-
-
Heilkenbrinker, U.1
Dietrich, R.2
Didier, A.3
Zhu, K.4
Lindback, T.5
Granum, P.E.6
-
64
-
-
84883756541
-
Structure of the NheA component of the Nhe toxin from Bacillus cereus: implications for function
-
1:CAS:528:DC%2BC3sXhsVyrsbzP 24040335 3769298
-
Ganash M, Phung D, Sedelnikova SE, Lindback T, Granum PE, Artymiuk PJ. Structure of the NheA component of the Nhe toxin from Bacillus cereus: implications for function. PLoS One. 2013;8(9), e74748.
-
(2013)
PLoS One
, vol.8
, Issue.9
-
-
Ganash, M.1
Phung, D.2
Sedelnikova, S.E.3
Lindback, T.4
Granum, P.E.5
Artymiuk, P.J.6
-
65
-
-
0034284298
-
Common occurrence of enterotoxin genes and enterotoxicity in Bacillus thuringiensis
-
1:CAS:528:DC%2BD3cXlvV2ltrw%3D 10981706
-
Gaviria Rivera AM, Granum PE, Priest FG. Common occurrence of enterotoxin genes and enterotoxicity in Bacillus thuringiensis. FEMS Microbiol Lett. 2000;190(1):151-5.
-
(2000)
FEMS Microbiol Lett
, vol.190
, Issue.1
, pp. 151-155
-
-
Gaviria Rivera, A.M.1
Granum, P.E.2
Priest, F.G.3
-
66
-
-
0037167470
-
Pathogenic potential of fifty Bacillus weihenstephanensis strains
-
1:CAS:528:DC%2BD38XotVKqsrs%3D 12393199
-
Stenfors LP, Mayr R, Scherer S, Granum PE. Pathogenic potential of fifty Bacillus weihenstephanensis strains. FEMS Microbiol Lett. 2002;215(1):47-51.
-
(2002)
FEMS Microbiol Lett
, vol.215
, Issue.1
, pp. 47-51
-
-
Stenfors, L.P.1
Mayr, R.2
Scherer, S.3
Granum, P.E.4
-
67
-
-
84861127053
-
Temperature-dependent production of various PlcR-controlled virulence factors in Bacillus weihenstephanensis strain KBAB4
-
1:CAS:528:DC%2BC38XlsVSls7s%3D 22307282 3318839
-
Rejasse A, Gilois N, Barbosa I, Huillet E, Bevilacqua C, Tran S, et al. Temperature-dependent production of various PlcR-controlled virulence factors in Bacillus weihenstephanensis strain KBAB4. Appl Environ Microbiol. 2012;78(8):2553-61.
-
(2012)
Appl Environ Microbiol
, vol.78
, Issue.8
, pp. 2553-2561
-
-
Rejasse, A.1
Gilois, N.2
Barbosa, I.3
Huillet, E.4
Bevilacqua, C.5
Tran, S.6
-
68
-
-
33947588845
-
Food poisoning potential of Bacillus cereus strains from Norwegian dairies
-
1:CAS:528:DC%2BD2sXjslShsbk%3D 17292990
-
Stenfors Arnesen LP, O'Sullivan K, Granum PE. Food poisoning potential of Bacillus cereus strains from Norwegian dairies. Int J Food Microbiol. 2007;116(2):292-6.
-
(2007)
Int J Food Microbiol
, vol.116
, Issue.2
, pp. 292-296
-
-
Stenfors Arnesen, L.P.1
O'Sullivan, K.2
Granum, P.E.3
-
69
-
-
84885355562
-
PCR detection of cytK gene in Bacillus cereus group strains isolated from food samples
-
1:CAS:528:DC%2BC3sXhsleltLfL 24060693
-
Oltuszak-Walczak E, Walczak P. PCR detection of cytK gene in Bacillus cereus group strains isolated from food samples. J Microbiol Methods. 2013;95(2):295-301.
-
(2013)
J Microbiol Methods
, vol.95
, Issue.2
, pp. 295-301
-
-
Oltuszak-Walczak, E.1
Walczak, P.2
-
70
-
-
33645019830
-
Diversity of commensal Bacillus cereus sensu lato isolated from the common sow bug (Porcellio scaber, Isopoda)
-
1:CAS:528:DC%2BD28XktlCqtLk%3D 16542411
-
Swiecicka I, Mahillon J. Diversity of commensal Bacillus cereus sensu lato isolated from the common sow bug (Porcellio scaber, Isopoda). FEMS Microbiol Ecol. 2006;56(1):132-40.
-
(2006)
FEMS Microbiol Ecol
, vol.56
, Issue.1
, pp. 132-140
-
-
Swiecicka, I.1
Mahillon, J.2
-
71
-
-
84926219612
-
A feed additive containing Bacillus toyonensis (Toyocerin((R))) protects against enteric pathogens in postweaning piglets
-
1:CAS:528:DC%2BC2MXivVaru7s%3D 25512110
-
Kantas D, Papatsiros VG, Tassis PD, Giavasis I, Bouki P, Tzika ED. A feed additive containing Bacillus toyonensis (Toyocerin((R))) protects against enteric pathogens in postweaning piglets. J Appl Microbiol. 2015;118(3):727-38.
-
(2015)
J Appl Microbiol
, vol.118
, Issue.3
, pp. 727-738
-
-
Kantas, D.1
Papatsiros, V.G.2
Tassis, P.D.3
Giavasis, I.4
Bouki, P.5
Tzika, E.D.6
-
72
-
-
23844544940
-
The use of bacterial spore formers as probiotics
-
1:CAS:528:DC%2BD2MXos1WktLs%3D 16102604
-
Hong HA, le Duc H, Cutting SM. The use of bacterial spore formers as probiotics. FEMS Microbiol Rev. 2005;29(4):813-35.
-
(2005)
FEMS Microbiol Rev
, vol.29
, Issue.4
, pp. 813-835
-
-
Hong, H.A.1
Le Duc, H.2
Cutting, S.M.3
-
73
-
-
13644263348
-
Characterization of bacillus probiotics available for human use
-
1:CAS:528:DC%2BD2cXjtlOiuro%3D 383048
-
Duc LH, Hong HA, Barbosa TM, Henriques AO, Cutting SM. Characterization of bacillus probiotics available for human use. Appl Environ Microbiol. 2004;70(4):2161-71.
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.4
, pp. 2161-2171
-
-
Duc, L.H.1
Hong, H.A.2
Barbosa, T.M.3
Henriques, A.O.4
Cutting, S.M.5
-
74
-
-
84876167626
-
Concerted action of sphingomyelinase and non-hemolytic enterotoxin in pathogenic Bacillus cereus
-
1:CAS:528:DC%2BC3sXmvVCks7c%3D 23613846 3628865
-
Doll VM, Ehling-Schulz M, Vogelmann R. Concerted action of sphingomyelinase and non-hemolytic enterotoxin in pathogenic Bacillus cereus. PLoS One. 2013;8(4), e61404.
-
(2013)
PLoS One
, vol.8
, Issue.4
-
-
Doll, V.M.1
Ehling-Schulz, M.2
Vogelmann, R.3
-
75
-
-
73849146488
-
The InhA metalloproteases of Bacillus cereus contribute concomitantly to virulence
-
1:CAS:528:DC%2BC3cXisVKhu7s%3D 19837797 2798277
-
Guillemet E, Cadot C, Tran SL, Guinebretiere MH, Lereclus D, Ramarao N. The InhA metalloproteases of Bacillus cereus contribute concomitantly to virulence. J Bacteriol. 2010;192(1):286-94.
-
(2010)
J Bacteriol
, vol.192
, Issue.1
, pp. 286-294
-
-
Guillemet, E.1
Cadot, C.2
Tran, S.L.3
Guinebretiere, M.H.4
Lereclus, D.5
Ramarao, N.6
-
76
-
-
77950484786
-
InhA1, NprA, and HlyII as candidates for markers to differentiate pathogenic from nonpathogenic Bacillus cereus strains
-
1:CAS:528:DC%2BC3cXmt1Kgurg%3D 20129969 2849619
-
Cadot C, Tran SL, Vignaud ML, De Buyser ML, Kolsto AB, Brisabois A, et al. InhA1, NprA, and HlyII as candidates for markers to differentiate pathogenic from nonpathogenic Bacillus cereus strains. J Clin Microbiol. 2010;48(4):1358-65.
-
(2010)
J Clin Microbiol
, vol.48
, Issue.4
, pp. 1358-1365
-
-
Cadot, C.1
Tran, S.L.2
Vignaud, M.L.3
De Buyser, M.L.4
Kolsto, A.B.5
Brisabois, A.6
-
77
-
-
0019321718
-
Rapid isolation of high molecular weight plant DNA
-
1:CAS:528:DyaL3cXmtVSmtL8%3D 7433111 324241
-
Murray MG, Thompson WF. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 1980;8(19):4321-5.
-
(1980)
Nucleic Acids Res
, vol.8
, Issue.19
, pp. 4321-4325
-
-
Murray, M.G.1
Thompson, W.F.2
-
78
-
-
84856468953
-
NGS QC toolkit: a toolkit for quality control of next generation sequencing data
-
1:CAS:528:DC%2BC38XisFyks7k%3D 22312429 3270013
-
Patel RK, Jain M. NGS QC toolkit: a toolkit for quality control of next generation sequencing data. PLoS One. 2012;7(2), e30619.
-
(2012)
PLoS One
, vol.7
, Issue.2
-
-
Patel, R.K.1
Jain, M.2
-
79
-
-
84891349005
-
Informed and automated k-mer size selection for genome assembly
-
1:CAS:528:DC%2BC3sXhvF2kur%2FI 23732276
-
Chikhi R, Medvedev P. Informed and automated k-mer size selection for genome assembly. Bioinformatics. 2014;30(1):31-7.
-
(2014)
Bioinformatics
, vol.30
, Issue.1
, pp. 31-37
-
-
Chikhi, R.1
Medvedev, P.2
-
80
-
-
66449136667
-
ABySS: a parallel assembler for short read sequence data
-
1:CAS:528:DC%2BD1MXntFGrsbo%3D 19251739 2694472
-
Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ, Birol I. ABySS: a parallel assembler for short read sequence data. Genome Res. 2009;19(6):1117-23.
-
(2009)
Genome Res
, vol.19
, Issue.6
, pp. 1117-1123
-
-
Simpson, J.T.1
Wong, K.2
Jackman, S.D.3
Schein, J.E.4
Jones, S.J.5
Birol, I.6
-
81
-
-
84876266928
-
QUAST: quality assessment tool for genome assemblies
-
1:CAS:528:DC%2BC3sXlvVKitrw%3D 23422339 3624806
-
Gurevich A, Saveliev V, Vyahhi N, Tesler G. QUAST: quality assessment tool for genome assemblies. Bioinformatics. 2013;29(8):1072-5.
-
(2013)
Bioinformatics
, vol.29
, Issue.8
, pp. 1072-1075
-
-
Gurevich, A.1
Saveliev, V.2
Vyahhi, N.3
Tesler, G.4
-
82
-
-
77956193448
-
progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement
-
20593022 2892488
-
Darling AE, Mau B, Perna NT. progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One. 2010;5(6), e11147.
-
(2010)
PLoS One
, vol.5
, Issue.6
-
-
Darling, A.E.1
Mau, B.2
Perna, N.T.3
-
83
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
1:CAS:528:DC%2BD28XntValsw%3D%3D 16221896
-
Huson DH, Bryant D. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol. 2006;23(2):254-67.
-
(2006)
Mol Biol Evol
, vol.23
, Issue.2
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
84
-
-
84891935788
-
When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes
-
24349125 3857212
-
Gardner SN, Hall BG. When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes. PLoS One. 2013;8(12), e81760.
-
(2013)
PLoS One
, vol.8
, Issue.12
-
-
Gardner, S.N.1
Hall, B.G.2
-
85
-
-
84890330527
-
MEGA6: molecular evolutionary genetics analysis version 6.0
-
1:CAS:528:DC%2BC3sXhvVKhurzP 24132122 3840312
-
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 2013;30(12):2725-9.
-
(2013)
Mol Biol Evol
, vol.30
, Issue.12
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
86
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
1:CAS:528:DyaK3sXks1CksL4%3D 8336541
-
Tamura K, Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol. 1993;10(3):512-26.
-
(1993)
Mol Biol Evol
, vol.10
, Issue.3
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
-
87
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
-
21988835 3261699
-
Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, et al. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol. 2011;7:539.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 539
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
Gibson, T.J.4
Karplus, K.5
Li, W.6
-
88
-
-
77957243284
-
RDP3: a flexible and fast computer program for analyzing recombination
-
1:CAS:528:DC%2BC3cXht1WhtLbM 20798170 2944210
-
Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P. RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics. 2010;26(19):2462-3.
-
(2010)
Bioinformatics
, vol.26
, Issue.19
, pp. 2462-2463
-
-
Martin, D.P.1
Lemey, P.2
Lott, M.3
Moulton, V.4
Posada, D.5
Lefeuvre, P.6
-
89
-
-
0027979119
-
Improved purification and characterization of hemolysin BL, a hemolytic dermonecrotic vascular permeability factor from Bacillus cereus
-
1:CAS:528:DyaK2cXivFelu70%3D 8112873 186213
-
Beecher DJ, Wong AC. Improved purification and characterization of hemolysin BL, a hemolytic dermonecrotic vascular permeability factor from Bacillus cereus. Infect Immun. 1994;62(3):980-6.
-
(1994)
Infect Immun
, vol.62
, Issue.3
, pp. 980-986
-
-
Beecher, D.J.1
Wong, A.C.2
-
90
-
-
76649087644
-
Identification of the main promoter directing cereulide biosynthesis in emetic Bacillus cereus and its application for real-time monitoring of ces gene expression in foods
-
1:CAS:528:DC%2BC3cXisVKms7k%3D 20038713 2820966
-
Dommel MK, Frenzel E, Strasser B, Blochinger C, Scherer S, Ehling-Schulz M. Identification of the main promoter directing cereulide biosynthesis in emetic Bacillus cereus and its application for real-time monitoring of ces gene expression in foods. Appl Environ Microbiol. 2010;76(4):1232-40.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.4
, pp. 1232-1240
-
-
Dommel, M.K.1
Frenzel, E.2
Strasser, B.3
Blochinger, C.4
Scherer, S.5
Ehling-Schulz, M.6
|