Taxonomy proposal for Old World monkey adenoviruses: characterisation of several non-human, non-ape primate adenovirus lineages

Archives of Virology

Volumn 160, Issue 12, 2015, Pages 3165-3177

  Pantó, Laura ^a,b   Podgorski, Iva I ^a   Jánoska, Máté ^a   Márkó, Orsolya ^a   Harrach, Balázs ^a  

^a INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

^b HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; CERCOPITHECIDAE; CLASSIFICATION; GENETICS; HOST RANGE; HUMAN; ISOLATION AND PURIFICATION; MASTADENOVIRUS; MOLECULAR GENETICS; MONKEY DISEASE; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PHYSIOLOGY; SIMIAN VIRUS; VIROLOGY; VIRUS GENOME;

ADENOVIRUSES, SIMIAN; ANIMALS; BASE SEQUENCE; CERCOPITHECIDAE; GENOME, VIRAL; HOST SPECIFICITY; HUMANS; MASTADENOVIRUS; MOLECULAR SEQUENCE DATA; MONKEY DISEASES; OPEN READING FRAMES; PHYLOGENY;

EID: 84946495386     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-015-2575-z     Document Type: Article

References (51)

1. Benkő M, Harrach B, Russell WC (2000) Family Adenoviridae. In: Van Regenmortel MHV, Fauquet CM, Bishop DHL, Carstens EB, Estes MK, Lemon SM, Maniloff J, Mayo MA, McGeoch DJ, Pringle CR, Wickner RB (eds) Virus taxonomy, classification and nomenclature of viruses: seventh report of the international committee on taxonomy of viruses. Academic Press, San Diego, pp 227–238
2. Benkő M, Harrach B (2003) Molecular evolution of adenoviruses. Curr Top Microbiol Immunol 272:3–35
3. Benkő M (2008) Adenoviruses: Pathogenesis. In: Mahy BWJ, Van Regenmortel MHV (eds) Encyclopedia of virology, 3rd edn. Elsevier, Oxford, pp 24–29
4. Bányai K, Esona MD, Liu A, Wang Y, Tu X, Jiang B (2010) Molecular detection of novel adenoviruses in fecal specimens of captive monkeys with diarrhea in China. Vet Microbiol 142:416–419
5. Capone S, D’Alise AM, Ammendola V, Colloca S, Cortese R, Nicosia A, Folgori A (2013) Development of chimpanzee adenoviruses as vaccine vectors: challenges and successes emerging from clinical trials. Expert Rev Vaccines 12:379–393
6. Chen EC, Yagi S, Kelly KR, Mendoza SP, Tarara RP, Canfield DR, Maninger N, Rosenthal A, Spinner A, Bales KL, Schnurr DP, Lerche NW, Chiu CY (2011) Cross-species transmission of a novel adenovirus associated with a fulminant pneumonia outbreak in a new world monkey colony. PLoS Pathog 7:e1002155
7. Chiu CY, Yagi S, Lu X, Yu G, Chen EC, Liu M, Dick EJ, Carey KD, Erdman DD, Leland MM, Patterson JL (2013) A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection. MBio 4:e00084
8. Colloca S, Barnes E, Folgori A, Ammendola V, Capone S, Cirillo A, Siani L, Naddeo M, Grazioli F, Esposito ML, Ambrosio M, Sparacino A, Bartiromo M, Meola A, Smith K, Kurioka A, O’Hara GA, Ewer KJ, Anagnostou N, Bliss C, Hill AV, Traboni C, Klenerman P, Cortese R, Nicosia A (2012) Vaccine vectors derived from a large collection of simian adenoviruses induce potent cellular immunity across multiple species. Sci Transl Med 4:115ra112
9. Darriba D, Taboada GL, Doallo R, Posada D (2011) ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27:1164–1165
10. Farina SF, Gao GP, Xiang ZQ, Rux JJ, Burnett RM, Alvira MR, Marsh J, Ertl HC, Wilson JM (2001) Replication-defective vector based on a chimpanzee adenovirus. J Virol 75:11603–11613
11. Foytich KR, Deshazer G, Esona MD, Liu A, Wang Y, Tu X, Jiang B (2014) Identification of new provisional simian adenovirus species from captive monkeys, China. Emerg Infect Dis 20:1758–1759
12. Fuentes-Marins R, Rodriguez AR, Kalter SS, Hellman A, Crandell RA (1963) Isolation of enteroviruses from the normal baboon (Papio doguera). J Bacteriol 85:1045–1050
13. Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704
14. Gál J, Hornyák Á, Mándoki M, Bakonyi T, Balka G, Szeredi L, Marosán M, Ludányi T, Forgách P, Sós E, Demeter Z, Farkas SL (2013) Novel mastadenovirus infection and clinical disease in a pygmy marmoset (Callithrix [Cebuella] pygmaea). Vet Microbiol 167:695–699
15. Hall NH, Archer LL, Childress AL, Wellehan JF (2012) Identification of a novel adenovirus in a cotton-top tamarin (Saguinus oedipus). J Vet Diagn Invest 24:359–363
16. Harrach B, Benkő M, Both GW, Brown M, Davison AJ, Echavarria M, Hess M, Jones MS, Kajon A, Lehmkuhl HD, Mautner V, Mittal SK, Wadell G (2011) Family Adenoviridae. In: King AMQ, Adams MJ, Lefkowitz E, Carstens EB (eds) Virus taxonomy, ninth report of the international committee on taxonomy of viruses. Elsevier, Oxford, pp 125–141
17. Harrach B (2014) Adenoviruses: general features. In: Reference module in biomedical sciences. Elsevier, Amsterdam. doi:10.1016/B978-0-12-801238-3.02523-X
18. Hull RN, Minner JR, Smith JW (1956) New viral agents recovered from tissue cultures of monkey kidney cells. I. Origin and properties of cytopathogenic agents S.V.1, S.V.2, S.V.4, S.V.5, S.V.6, S.V.11, S.V.12 and S.V.15. Am J Hyg 63:204–215
19. Hull RN, Minner JR (1957) New viral agents recovered from tissue cultures of monkey kidney cells. II. Problems of isolation and identification. Ann N Y Acad Sci 67:413–423
20. Hull RN, Minner JR, Mascoli CC (1958) New viral agents recovered from tissue cultures of monkey kidney cells. III. Recovery of additional agents both from cultures of monkey tissues and directly from tissues and excreta. Am J Hyg 68:31–44
21. Hull RN, Johnson IS, Culbertson CG, Reimer CB, Wright HF (1965) Oncogenicity of the simian adenoviruses. Science 150:1044–1046
22. Jones MS, Harrach B, Ganac RD, Gozum MM, Dela Cruz WP, Riedel B, Pan C, Delwart EL, Schnurr DP (2007) New adenovirus species found in a patient presenting with gastroenteritis. J Virol 81:5978–5984
23. Kidd AH, Garwicz D, Oberg M (1995) Human and simian adenoviruses: phylogenetic inferences from analysis of VA RNA genes. Virology 207:32–45
24. Kim CS, Sueltenfuss ES, Kalter SS (1967) Isolation and characterization of simian adenoviruses isolated in association with an outbreak of pneumoenteritis in vervet monkeys (Cercopithecus aethiops). J Infect Dis 117:292–300
25. Kimelman D, Miller JS, Porter D, Roberts BE (1985) E1a regions of the human adenoviruses and of the highly oncogenic simian adenovirus 7 are closely related. J Virol 53:399–409
26. Kiss I, Matiz K, Allard A, Wadell G, Benkő M (1996) Detection of homologous DNA sequences in animal adenoviruses by polymerase chain reaction. Acta Vet Hung 44:243–251
27. Kovács GM, Davison AJ, Zakhartchouk AN, Harrach B (2004) Analysis of the first complete genome sequence of an Old World monkey adenovirus reveals a lineage distinct from the six human adenovirus species. J Gen Virol 85:2799–2807
28. Kovács GM, Harrach B, Zakhartchouk AN, Davison AJ (2005) Complete genome sequence of simian adenovirus 1: an Old World monkey adenovirus with two fiber genes. J Gen Virol 86:1681–1686
29. Li QG, Wadell G (1988) The degree of genetic variability among adenovirus type 4 strains isolated from man and chimpanzee. Arch Virol 101:65–77
30. Lu J, Wang Q, Wang H, Li G, Gao G (2011) Molecular characterization of adenoviruses in fecal samples of captively bred rhesus macaques in China. Vet Microbiol 149:461–466
31. Malherbe H, Harwin R (1963) The cytopathic effects of vervet monkey viruses. S Afr Med J 37:407–411
32. Malouli D, Howell GL, Legasse AW, Kahl C, Axthelm MK, Hansen SG, Früh K (2014) Full genome sequence analysis of a novel adenovirus of rhesus macaque origin indicates a new simian adenovirus type and species. Virol Rep 3–4:18–29
33. Maluquer de Motes C, Hundesa A, Almeida FC, Bofill-Mas S, Girones R (2011) Isolation of a novel monkey adenovirus reveals a new phylogenetic clade in the evolutionary history of simian adenoviruses. Virol J 8:125
34. Milne I, Lindner D, Bayer M, Husmeier D, McGuire G, Marshall DF, Wright F (2009) TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics 25:126–127
35. Peruzzi D, Dharmapuri S, Cirillo A, Bruni BE, Nicosia A, Cortese R, Colloca S, Ciliberto G, La Monica N, Aurisicchio L (2009) A novel chimpanzee serotype-based adenoviral vector as delivery tool for cancer vaccines. Vaccine 27:1293–1300
36. Purkayastha A, Ditty SE, Su J, McGraw J, Hadfield TL, Tibbetts C, Seto D (2005) Genomic and bioinformatics analysis of HAdV-4, a human adenovirus causing acute respiratory disease: implications for gene therapy and vaccine vector development. J Virol 79:2559–2572
37. Rapoza NP (1967) A classification of simian adenoviruses based on hemagglutination. Am J Epidemiol 86:736–745
38. Rogers NG, Basnight M, Gibbs CJ, Gajdusek DC (1967) Latent viruses in chimpanzees with experimental kuru. Nature 216:446–449
39. Rowe WP, Hartley JW, Huebner RJ (1956) Additional serotypes of the APC virus group. Proc Soc Exp Biol Med 91:260–262
40. Roy S, Gao G, Clawson DS, Vandenberghe LH, Farina SF, Wilson JM (2004) Complete nucleotide sequences and genome organization of four chimpanzee adenoviruses. Virology 324:361–372
41. Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM (2009) Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates. PLoS Pathog 5:e1000503
42. Roy S, Clawson DS, Adam VS, Medina A, Wilson JM (2011) Construction of gene transfer vectors based on simian adenovirus 7. J Gen Virol 92:1749–1753
43. Roy S, Sandhu A, Medina A, Clawson DS, Wilson JM (2012) Adenoviruses in fecal samples from asymptomatic rhesus macaques, United States. Emerg Infect Dis 18:1081–1088
44. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
45. Vasileva VA, Ivanov MT, Rumel NB, D’Yachenko AG, Kakubava VV, Danelyan GA (1978) Isolation and biological characterization of an adenovirus of rhesus macaques. Acta Biol Med Ger 37:1281–1287
46. Wang Y, Tu X, Humphrey C, McClure H, Jiang X, Qin C, Glass RI, Jiang B (2007) Detection of viral agents in fecal specimens of monkeys with diarrhea. J Med Primatol 36:101–107
47. Wevers D, Leendertz FH, Scuda N, Boesch C, Robbins MM, Head J, Ludwig C, Kühn J, Ehlers B (2010) A novel adenovirus of Western lowland gorillas (Gorilla gorilla gorilla). Virol J 7:303
48. Wevers D, Metzger S, Babweteera F, Bieberbach M, Boesch C, Cameron K, Couacy-Hymann E, Cranfield M, Gray M, Harris LA, Head J, Jeffery K, Knauf S, Lankester F, Leendertz SA, Lonsdorf E, Mugisha L, Nitsche A, Reed P, Robbins M, Travis DA, Zommers Z, Leendertz FH, Ehlers B (2011) Novel adenoviruses in wild primates: a high level of genetic diversity and evidence of zoonotic transmissions. J Virol 85:10774–10784
49. Xiang Z, Gao G, Reyes-Sandoval A, Cohen CJ, Li Y, Bergelson JM, Wilson JM, Ertl HC (2002) Novel, chimpanzee serotype 68-based adenoviral vaccine carrier for induction of antibodies to a transgene product. J Virol 76:2667–2675
50. Zhou C, Tian H, Wang X, Liu W, Yang S, Shen Q, Wang Y, Ni B, Chen S, Fu X, Fei R, Zhang W (2014) The genome sequence of a novel simian adenovirus in a chimpanzee reveals a close relationship to human adenoviruses. Arch Virol 159:1765–1770
51. Zöller M, Mätz-Rensing K, Kaup FJ (2008) Adenoviral hepatitis in a SIV-infected rhesus monkey (Macaca mulatta). J Med Primatol 37:184–187