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Volumn 31, Issue 9, 2015, Pages 1478-1480

Epock: Rapid analysis of protein pocket dynamics

Author keywords

[No Author keywords available]

Indexed keywords

HEAT SHOCK PROTEIN 90; ION CHANNEL; PROTEIN BINDING;

EID: 84946174179     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btu822     Document Type: Article
Times cited : (72)

References (7)
  • 1
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    • POVME: An algorithm for measuring bindingpocket volumes
    • Durrant, J.D. et al. (2011) POVME: An algorithm for measuring bindingpocket volumes. J. Mol. Graph. Model., 29, 773-776.
    • (2011) J. Mol. Graph. Model. , vol.29 , pp. 773-776
    • Durrant, J.D.1
  • 2
    • 0029878720 scopus 로고    scopus 로고
    • VMD: Visual molecular dynamics
    • 27-28
    • Humphrey, W. et al. (1996) VMD: visual molecular dynamics. J. Mol. Graph., 14, 33-38, 27-28.
    • (1996) J. Mol. Graph. , vol.14 , pp. 33-38
    • Humphrey, W.1
  • 3
    • 84873038692 scopus 로고    scopus 로고
    • Modeling complex biological systems: From solution chemistry to membranes and channels
    • Laurent, B. et al. (2013) Modeling complex biological systems: from solution chemistry to membranes and channels. Pure Appl. Chem., 85, 1-13.
    • (2013) Pure Appl. Chem. , vol.85 , pp. 1-13
    • Laurent, B.1
  • 4
    • 84900549764 scopus 로고    scopus 로고
    • Efficient characterisation of protein cavities within molecular simulation trajectories: Trj-cavity
    • Paramo, T. et al. (2014) Efficient characterisation of protein cavities within molecular simulation trajectories: trj-cavity. J. Chem. Theory Comput., 10, 2151-2164.
    • (2014) J. Chem. Theory Comput. , vol.10 , pp. 2151-2164
    • Paramo, T.1
  • 5
    • 82255164267 scopus 로고    scopus 로고
    • MDpocket: Open-source cavity detection and characterization on molecular dynamics trajectories
    • Schmidtke, P. et al. (2011) MDpocket: open-source cavity detection and characterization on molecular dynamics trajectories. Bioinformatics, 27, 3276-3285.
    • (2011) Bioinformatics , vol.27 , pp. 3276-3285
    • Schmidtke, P.1
  • 6
    • 0027145628 scopus 로고
    • The pore dimensions of gramicidin A
    • Smart, O.S. et al. (1993) The pore dimensions of gramicidin A. Biophys. J., 65, 2455-2460.
    • (1993) Biophys. J. , vol.65 , pp. 2455-2460
    • Smart, O.S.1
  • 7
    • 3042637928 scopus 로고    scopus 로고
    • Structure-activity relationships in purine-based inhibitor binding to HSP90 isoforms
    • Wright, L. et al. (2004) Structure-activity relationships in purine-based inhibitor binding to HSP90 isoforms. Chem. Biol., 11, 775-785.
    • (2004) Chem. Biol. , vol.11 , pp. 775-785
    • Wright, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.