메뉴 건너뛰기




Volumn 15, Issue 1, 2015, Pages

GeXP analyzer-based multiplex reverse-transcription PCR assay for the simultaneous detection and differentiation of eleven duck viruses

Author keywords

Duck virus; Genome Lab Gene Expression Profiler (GeXP); Multiplex PCR; Separation identification

Indexed keywords

COMPLEMENTARY DNA;

EID: 84945540619     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/s12866-015-0590-6     Document Type: Article
Times cited : (15)

References (35)
  • 1
    • 84949526202 scopus 로고    scopus 로고
    • The current epidemic status of duck disease and its prevention and control strategies
    • 1:CAS:528:DC%2BC38XhvVGktbrJ
    • Zhang D. The current epidemic status of duck disease and its prevention and control strategies. China Poultry. 2012;34:38-40.
    • (2012) China Poultry , vol.34 , pp. 38-40
    • Zhang, D.1
  • 2
    • 0014470339 scopus 로고
    • Duck plague virus distribution in embryonating chicken and duck eggs
    • 1:STN:280:DyaF1M7ktVShsg%3D%3D 4975580
    • Butterfield WK, Ata FA, Dardiri AH. Duck plague virus distribution in embryonating chicken and duck eggs. Avian Dis. 1969;13(1):198-202.
    • (1969) Avian Dis , vol.13 , Issue.1 , pp. 198-202
    • Butterfield, W.K.1    Ata, F.A.2    Dardiri, A.H.3
  • 3
    • 84881261062 scopus 로고    scopus 로고
    • Duck egg drop syndrome virus: an emerging Tembusu-related flavivirus in China
    • 23917842
    • Liu P, Lu H, Li S, Wu Y, Gao GF, Su J. Duck egg drop syndrome virus: an emerging Tembusu-related flavivirus in China. Sci China Life Sci. 2013;56(8):701-10.
    • (2013) Sci China Life Sci , vol.56 , Issue.8 , pp. 701-710
    • Liu, P.1    Lu, H.2    Li, S.3    Wu, Y.4    Gao, G.F.5    Su, J.6
  • 5
    • 84945573582 scopus 로고    scopus 로고
    • The waterfowl industry faced with the challenge in China
    • 1:CAS:528:DC%2BC2cXjs12ksL8%3D
    • Hou S. The waterfowl industry faced with the challenge in China. China Poultry. 2013;35(10):36-7.
    • (2013) China Poultry , vol.35 , Issue.10 , pp. 36-37
    • Hou, S.1
  • 6
    • 0032123432 scopus 로고    scopus 로고
    • Detection of duck enteritis virus by polymerase chain reaction
    • 1:STN:280:DyaK1cvltVeiuw%3D%3D 9777156
    • Plummer PJ, Alefantis T, Kaplan S, O'Connell P, Shawky S, Schat KA. Detection of duck enteritis virus by polymerase chain reaction. Avian Dis. 1998;42(3):554-64.
    • (1998) Avian Dis , vol.42 , Issue.3 , pp. 554-564
    • Plummer, P.J.1    Alefantis, T.2    Kaplan, S.3    O'Connell, P.4    Shawky, S.5    Schat, K.A.6
  • 7
    • 84880511672 scopus 로고    scopus 로고
    • Antibody survey on avian influenza viruses using egg yolks of ducks in Hanoi between 2010 and 2012
    • 1:CAS:528:DC%2BC3sXhtV2rur%2FN 23849095
    • Hotta K, Takakuwa H, Yabuta T, Ung TTH, Usui T, Nguyen HLK, et al. Antibody survey on avian influenza viruses using egg yolks of ducks in Hanoi between 2010 and 2012. Vet Microbiol. 2013;166(1-2):179-83.
    • (2013) Vet Microbiol , vol.166 , Issue.1-2 , pp. 179-183
    • Hotta, K.1    Takakuwa, H.2    Yabuta, T.3    Ung, T.T.H.4    Usui, T.5    Nguyen, H.L.K.6
  • 8
    • 84880020626 scopus 로고    scopus 로고
    • Evaluation of a commercial ELISA for H5 low pathogenic avian influenza virus antibody detection in duck sera using Bayesian methods
    • 1:CAS:528:DC%2BC3sXht1aru73E 23727545
    • Schmitz A, Le Bras MO, Guillemoto C, Pierre I, Rose N, Bougeard S, et al. Evaluation of a commercial ELISA for H5 low pathogenic avian influenza virus antibody detection in duck sera using Bayesian methods. J Virol Methods. 2013;193(1):197-204.
    • (2013) J Virol Methods , vol.193 , Issue.1 , pp. 197-204
    • Schmitz, A.1    Le Bras, M.O.2    Guillemoto, C.3    Pierre, I.4    Rose, N.5    Bougeard, S.6
  • 9
    • 84885895026 scopus 로고    scopus 로고
    • The comprehensive diagnosis and prevention of duck plague in northwest Shandong province of China
    • 1:CAS:528:DC%2BC3sXhslymtrrN 24135592
    • Wang G, Qu Y, Wang F, Hu D, Liu L, Li N, et al. The comprehensive diagnosis and prevention of duck plague in northwest Shandong province of China. Poult Sci. 2013;92(11):2892-8.
    • (2013) Poult Sci , vol.92 , Issue.11 , pp. 2892-2898
    • Wang, G.1    Qu, Y.2    Wang, F.3    Hu, D.4    Liu, L.5    Li, N.6
  • 10
    • 0015410728 scopus 로고
    • Growth of duck hepatitis virus in chicken embryos and in cell cultures derived from infected embryos
    • Mason RA, Tauraso NM, Ginn RK. Growth of duck hepatitis virus in chicken embryos and in cell cultures derived from infected embryos. Avian Dis. 1972;16(5):6.
    • (1972) Avian Dis , vol.16 , Issue.5 , pp. 6
    • Mason, R.A.1    Tauraso, N.M.2    Ginn, R.K.3
  • 11
    • 73249115569 scopus 로고    scopus 로고
    • Development and evaluation of a VP3-ELISA for the detection of goose and Muscovy duck parvovirus antibodies
    • 1:CAS:528:DC%2BC3cXjtleksA%3D%3D 19913055
    • Zhang Y, Li Y, Liu M, Zhang D, Guo D, Liu C, et al. Development and evaluation of a VP3-ELISA for the detection of goose and Muscovy duck parvovirus antibodies. J Virol Methods. 2010;163(2):405-9.
    • (2010) J Virol Methods , vol.163 , Issue.2 , pp. 405-409
    • Zhang, Y.1    Li, Y.2    Liu, M.3    Zhang, D.4    Guo, D.5    Liu, C.6
  • 12
    • 77951645440 scopus 로고    scopus 로고
    • Molecular detection of Muscovy duck parvovirus by loop-mediated isothermal amplification assay
    • 1:CAS:528:DC%2BC3cXktlyrtbc%3D 20181863
    • Ji J, Xie QM, Chen CY, Bai SW, Zou LS, Zuo KJ, et al. Molecular detection of Muscovy duck parvovirus by loop-mediated isothermal amplification assay. Poult Sci. 2010;89(3):477-83.
    • (2010) Poult Sci , vol.89 , Issue.3 , pp. 477-483
    • Ji, J.1    Xie, Q.M.2    Chen, C.Y.3    Bai, S.W.4    Zou, L.S.5    Zuo, K.J.6
  • 13
    • 77956226600 scopus 로고    scopus 로고
    • Development of an indirect ELISA for the detection of duck circovirus infection in duck flocks
    • 1:CAS:528:DC%2BC3cXhtFajs7%2FF 20409651
    • Liu SN, Zhang XX, Zou JF, Xie ZJ, Zhu YL, Zhao Q, et al. Development of an indirect ELISA for the detection of duck circovirus infection in duck flocks. Vet Microbiol. 2010;145(1-2):41-6.
    • (2010) Vet Microbiol , vol.145 , Issue.1-2 , pp. 41-46
    • Liu, S.N.1    Zhang, X.X.2    Zou, J.F.3    Xie, Z.J.4    Zhu, Y.L.5    Zhao, Q.6
  • 14
    • 84862490442 scopus 로고    scopus 로고
    • Quantitative analysis of waterfowl parvoviruses in geese and Muscovy ducks by real-time polymerase chain reaction: correlation between age, clinical symptoms and DNA copy number of waterfowl parvoviruses
    • 1:CAS:528:DC%2BC38XpsVWns7s%3D 22420608 3378466
    • Wozniakowski G, Samorek-Salamonowicz E, Kozdrun W. Quantitative analysis of waterfowl parvoviruses in geese and Muscovy ducks by real-time polymerase chain reaction: correlation between age, clinical symptoms and DNA copy number of waterfowl parvoviruses. BMC Vet Res. 2012;8:29.
    • (2012) BMC Vet Res , vol.8 , pp. 29
    • Wozniakowski, G.1    Samorek-Salamonowicz, E.2    Kozdrun, W.3
  • 15
    • 84997764865 scopus 로고    scopus 로고
    • Identification of a Genotype IX Newcastle Disease Virus in a Guangxi White Duck
    • 24115551 3795221
    • Xie Z, Xie L, Xu Z, Liu J, Pang Y, Deng X, et al. Identification of a Genotype IX Newcastle Disease Virus in a Guangxi White Duck. Genome Announc. 2013;1(5):e00836.
    • (2013) Genome Announc , vol.1 , Issue.5
    • Xie, Z.1    Xie, L.2    Xu, Z.3    Liu, J.4    Pang, Y.5    Deng, X.6
  • 16
    • 84900446519 scopus 로고    scopus 로고
    • A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
    • 24775810 4013541
    • Xie L, Xie Z, Zhao G, Liu J, Pang Y, Deng X, et al. A loop-mediated isothermal amplification assay for the visual detection of duck circovirus. Virol J. 2014;11:76.
    • (2014) Virol J , vol.11 , pp. 76
    • Xie, L.1    Xie, Z.2    Zhao, G.3    Liu, J.4    Pang, Y.5    Deng, X.6
  • 17
    • 79952262225 scopus 로고    scopus 로고
    • Custom design of a GeXP multiplexed assay used to assess expression profiles of inflammatory gene targets in normal colon, polyp, and tumor tissue
    • 1:CAS:528:DC%2BC3MXktl2mtL0%3D 21354059 3128578
    • Drew JE, Mayer C-D, Farquharson AJ, Young P, Barrera LN. Custom design of a GeXP multiplexed assay used to assess expression profiles of inflammatory gene targets in normal colon, polyp, and tumor tissue. J Mol Diagn. 2011;13(2):233-42.
    • (2011) J Mol Diagn , vol.13 , Issue.2 , pp. 233-242
    • Drew, J.E.1    Mayer, C.-D.2    Farquharson, A.J.3    Young, P.4    Barrera, L.N.5
  • 18
    • 84863762275 scopus 로고    scopus 로고
    • Novel multiplex method to assess insulin, leptin and adiponectin regulation of inflammatory cytokines associated with colon cancer
    • 1:CAS:528:DC%2BC38XksVChsbY%3D 22193626
    • Farquharson A, Steele R, Carey F, Drew J. Novel multiplex method to assess insulin, leptin and adiponectin regulation of inflammatory cytokines associated with colon cancer. Mol Biol Rep. 2012;39(5):5727-36.
    • (2012) Mol Biol Rep , vol.39 , Issue.5 , pp. 5727-5736
    • Farquharson, A.1    Steele, R.2    Carey, F.3    Drew, J.4
  • 19
    • 60749085623 scopus 로고    scopus 로고
    • Analytical validation of the GeXP analyzer and design of a workflow for cancer-biomarker discovery using multiplexed gene-expression profiling
    • 1:CAS:528:DC%2BD1cXhtlWrtL3L 18958454
    • Rai AJ, Kamath RM, Gerald W, Fleisher M. Analytical validation of the GeXP analyzer and design of a workflow for cancer-biomarker discovery using multiplexed gene-expression profiling. Anal Bioanal Chem. 2009;393(5):1505-11.
    • (2009) Anal Bioanal Chem , vol.393 , Issue.5 , pp. 1505-1511
    • Rai, A.J.1    Kamath, R.M.2    Gerald, W.3    Fleisher, M.4
  • 20
    • 77955094384 scopus 로고    scopus 로고
    • Detection of pandemic influenza A H1N1 virus by multiplex reverse transcription-PCR with a GeXP analyzer
    • 1:CAS:528:DC%2BC3cXptlWku78%3D 20452377
    • Qin M, Wang DY, Huang F, Nie K, Qu M, Wang M, et al. Detection of pandemic influenza A H1N1 virus by multiplex reverse transcription-PCR with a GeXP analyzer. J Virol Methods. 2010;168(1-2):255-8.
    • (2010) J Virol Methods , vol.168 , Issue.1-2 , pp. 255-258
    • Qin, M.1    Wang, D.Y.2    Huang, F.3    Nie, K.4    Qu, M.5    Wang, M.6
  • 21
    • 84862908031 scopus 로고    scopus 로고
    • Simultaneously typing nine serotypes of enteroviruses associated with hand, foot, and mouth disease by a GeXP analyzer-based multiplex reverse transcription-PCR assay
    • 1:CAS:528:DC%2BC38XktVKhtLg%3D 22116146 3264198
    • Hu X, Zhang Y, Zhou X, Xu B, Yang M, Wang M, et al. Simultaneously typing nine serotypes of enteroviruses associated with hand, foot, and mouth disease by a GeXP analyzer-based multiplex reverse transcription-PCR assay. J Clin Microbiol. 2012;50(2):288-93.
    • (2012) J Clin Microbiol , vol.50 , Issue.2 , pp. 288-293
    • Hu, X.1    Zhang, Y.2    Zhou, X.3    Xu, B.4    Yang, M.5    Wang, M.6
  • 22
    • 84859749769 scopus 로고    scopus 로고
    • Genotyping of 11 human papillomaviruses by multiplex PCR with a GeXP analyzer
    • 1:CAS:528:DC%2BC38XlsVWntbg%3D 22499019
    • Yang MJ, Luo L, Nie K, Wang M, Zhang C, Li J, et al. Genotyping of 11 human papillomaviruses by multiplex PCR with a GeXP analyzer. J Med Virol. 2012;84(6):957-63.
    • (2012) J Med Virol , vol.84 , Issue.6 , pp. 957-963
    • Yang, M.J.1    Luo, L.2    Nie, K.3    Wang, M.4    Zhang, C.5    Li, J.6
  • 23
    • 84905241678 scopus 로고    scopus 로고
    • Simultaneous typing of nine avian respiratory pathogens using a novel GeXP analyzer-based multiplex PCR assay
    • 25025815
    • Xie Z, Luo S, Xie L, Liu J, Pang Y, Deng X, et al. Simultaneous typing of nine avian respiratory pathogens using a novel GeXP analyzer-based multiplex PCR assay. J Virol Methods. 2014;207:188-95.
    • (2014) J Virol Methods , vol.207 , pp. 188-195
    • Xie, Z.1    Luo, S.2    Xie, L.3    Liu, J.4    Pang, Y.5    Deng, X.6
  • 24
    • 84874934220 scopus 로고    scopus 로고
    • A high throughput multiplex PCR assay for simultaneous detection of seven aminoglycoside-resistance genes in Enterobacteriaceae
    • 1:CAS:528:DC%2BC3sXnsFaitL4%3D 23497180 3637108
    • Hu X, Xu B, Yang Y, Liu D, Yang M, Wang J, et al. A high throughput multiplex PCR assay for simultaneous detection of seven aminoglycoside-resistance genes in Enterobacteriaceae. BMC Microbiol. 2013;13:58.
    • (2013) BMC Microbiol , vol.13 , pp. 58
    • Hu, X.1    Xu, B.2    Yang, Y.3    Liu, D.4    Yang, M.5    Wang, J.6
  • 25
    • 84876406842 scopus 로고    scopus 로고
    • A duplex quantitative real-time PCR assay for the detection of Haplosporidium and Perkinsus species in shellfish
    • 23371501
    • Xie Z, Xie L, Fan Q, Pang Y, Deng X, Xie ZQ, et al. A duplex quantitative real-time PCR assay for the detection of Haplosporidium and Perkinsus species in shellfish. Parasitol Res. 2013;112(4):1597-606.
    • (2013) Parasitol Res , vol.112 , Issue.4 , pp. 1597-1606
    • Xie, Z.1    Xie, L.2    Fan, Q.3    Pang, Y.4    Deng, X.5    Xie, Z.Q.6
  • 26
    • 84939616105 scopus 로고    scopus 로고
    • Simultaneous detection of eight swine reproductive and respiratory pathogens using a novel GeXP analyser-based multiplex PCR assay
    • 1:CAS:528:DC%2BC2MXhtlWltrzO 26259690
    • Zhang M, Xie Z, Xie L, Deng X, Luo S, Liu J, et al. Simultaneous detection of eight swine reproductive and respiratory pathogens using a novel GeXP analyser-based multiplex PCR assay. J Virol Methods. 2015;224:9-15.
    • (2015) J Virol Methods , vol.224 , pp. 9-15
    • Zhang, M.1    Xie, Z.2    Xie, L.3    Deng, X.4    Luo, S.5    Liu, J.6
  • 27
    • 0036656090 scopus 로고    scopus 로고
    • Development and application of a multiplex polymerase chain reaction for avian respiratory agents
    • 12243534
    • Pang Y, Wang H, Girshick T, Xie Z, Khan MI. Development and application of a multiplex polymerase chain reaction for avian respiratory agents. Avian Dis. 2002;46(3):691-9.
    • (2002) Avian Dis , vol.46 , Issue.3 , pp. 691-699
    • Pang, Y.1    Wang, H.2    Girshick, T.3    Xie, Z.4    Khan, M.I.5
  • 28
    • 33646256566 scopus 로고    scopus 로고
    • A multiplex RT-PCR for detection of type A influenza virus and differentiation of avian H5, H7, and H9 hemagglutinin subtypes
    • 1:CAS:528:DC%2BD28XksVCrurg%3D 16542820
    • Xie Z, Pang YS, Liu J, Deng X, Tang X, Sun J, et al. A multiplex RT-PCR for detection of type A influenza virus and differentiation of avian H5, H7, and H9 hemagglutinin subtypes. Mol Cell Probes. 2006;20(3-4):245-9.
    • (2006) Mol Cell Probes , vol.20 , Issue.3-4 , pp. 245-249
    • Xie, Z.1    Pang, Y.S.2    Liu, J.3    Deng, X.4    Tang, X.5    Sun, J.6
  • 29
    • 84866466510 scopus 로고    scopus 로고
    • Development of a real-time quantitative PCR for detecting duck hepatitis a virus genotype C
    • 1:CAS:528:DC%2BC38Xhs1SqsbrK 22855514 3457435
    • Huang Q, Yue H, Zhang B, Nie P, Tang C. Development of a real-time quantitative PCR for detecting duck hepatitis a virus genotype C. J Clin Microbiol. 2012;50(10):3318-23.
    • (2012) J Clin Microbiol , vol.50 , Issue.10 , pp. 3318-3323
    • Huang, Q.1    Yue, H.2    Zhang, B.3    Nie, P.4    Tang, C.5
  • 30
    • 84916618489 scopus 로고    scopus 로고
    • Development of multiplex PCR assay for simultaneous detection of Salmonella genus, Salmonella subspecies I, Salm. Enteritidis, Salm. Heidelberg and Salm. Typhimurium
    • 1:CAS:528:DC%2BC2cXitFSgu7bP 25358641
    • Park SH, Ricke SC. Development of multiplex PCR assay for simultaneous detection of Salmonella genus, Salmonella subspecies I, Salm. Enteritidis, Salm. Heidelberg and Salm. Typhimurium. J Appl Microbiol. 2015;118(1):152-60.
    • (2015) J Appl Microbiol , vol.118 , Issue.1 , pp. 152-160
    • Park, S.H.1    Ricke, S.C.2
  • 31
    • 84906513047 scopus 로고    scopus 로고
    • Establishment and application of a multiplex PCR for rapid and simultaneous detection of six viruses in swine
    • 1:CAS:528:DC%2BC2cXhtlKmt7fK 25116201
    • Zeng Z, Liu Z, Wang W, Tang D, Liang H. Establishment and application of a multiplex PCR for rapid and simultaneous detection of six viruses in swine. J Virol Methods. 2014;208:102-6.
    • (2014) J Virol Methods , vol.208 , pp. 102-106
    • Zeng, Z.1    Liu, Z.2    Wang, W.3    Tang, D.4    Liang, H.5
  • 32
    • 77953543621 scopus 로고    scopus 로고
    • Development of a multiplex real-time RT-PCR assay for detection of influenza A, influenza B, RSV and typing of the 2009-H1N1 influenza virus
    • 1:CAS:528:DC%2BC3cXntVeiu78%3D 20362006
    • Hymas WC, Mills A, Ferguson S, Langer J, She RC, Mahoney W, et al. Development of a multiplex real-time RT-PCR assay for detection of influenza A, influenza B, RSV and typing of the 2009-H1N1 influenza virus. J Virol Methods. 2010;167(2):113-8.
    • (2010) J Virol Methods , vol.167 , Issue.2 , pp. 113-118
    • Hymas, W.C.1    Mills, A.2    Ferguson, S.3    Langer, J.4    She, R.C.5    Mahoney, W.6
  • 33
    • 84864922486 scopus 로고    scopus 로고
    • The development of a GeXP-based multiplex reverse transcription-PCR assay for simultaneous detection of sixteen human respiratory virus types/subtypes
    • 22891685 3462154
    • Li J, Mao NY, Zhang C, Yang MJ, Wang M, Xu WB, et al. The development of a GeXP-based multiplex reverse transcription-PCR assay for simultaneous detection of sixteen human respiratory virus types/subtypes. BMC Infect Dis. 2012;12:189.
    • (2012) BMC Infect Dis , vol.12 , pp. 189
    • Li, J.1    Mao, N.Y.2    Zhang, C.3    Yang, M.J.4    Wang, M.5    Xu, W.B.6
  • 34
    • 84882711881 scopus 로고    scopus 로고
    • Development of a GeXP assay for simultaneous differentiation of six chicken respiratory viruses
    • 23905467
    • Luo SXZ, Xie L, Pang Y, Fan Q, Deng X, Liu J, et al. Development of a GeXP assay for simultaneous differentiation of six chicken respiratory viruses. Bing Du Xue Bao. 2013;29(3):250-7.
    • (2013) Bing Du Xue Bao , vol.29 , Issue.3 , pp. 250-257
    • Luo, S.X.Z.1    Xie, L.2    Pang, Y.3    Fan, Q.4    Deng, X.5    Liu, J.6
  • 35
    • 84945567060 scopus 로고    scopus 로고
    • Development of a duplex RT-PCR assay for detection of duck tembusu virus and duck plague virus
    • 1:CAS:528:DC%2BC2MXms1Siu7g%3D
    • Zhang YFX, Xie ZX, Xie LJ, Liu JB, Pang YS, Deng XW, et al. Development of a duplex RT-PCR assay for detection of duck tembusu virus and duck plague virus. Journal of Southern Agriculture. 2014;45:314-7.
    • (2014) Journal of Southern Agriculture , vol.45 , pp. 314-317
    • Zhang, Y.F.X.1    Xie, Z.X.2    Xie, L.J.3    Liu, J.B.4    Pang, Y.S.5    Deng, X.W.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.