Hepacivirus cross-species transmission and the origins of the hepatitis C virus

Current Opinion in Virology

Volumn 16, Issue , 2016, Pages 1-7

  Pybus, Oliver G ^a   Thézé, Julien ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CROSS INFECTION; DISEASE TRANSMISSION; DOG; EQUIDAE; HEPACIVIRUS; HEPATITIS C; MOLECULAR CLOCK; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; REVIEW; VIRUS TRANSMISSION; ZOONOSIS; ANIMAL; CLASSIFICATION; DISEASE CARRIER; HORSE; HUMAN; MOLECULAR EVOLUTION; PHYSIOLOGY; TRANSMISSION; VETERINARY; VIROLOGY;

ANIMALS; DISEASE RESERVOIRS; DOGS; EVOLUTION, MOLECULAR; HEPACIVIRUS; HEPATITIS C; HORSES; HUMANS; ZOONOSES;

EID: 84945537786     PISSN: 18796257     EISSN: 18796265     Source Type: Journal    
DOI: 10.1016/j.coviro.2015.10.002     Document Type: Review

References (49)

1. K. Mohd Hanafiah, J. Groeger, A.D. Flaxman, and S.T. Wiersma Global epidemiology of hepatitis C virus infection: new estimates of age-specific antibody to HCV seroprevalence Hepatology 57 2013 1333 1342
2. P.-L. Quan, C. Firth, J.M. Conte, S.H. Williams, C.M. Zambrana-Torrelio, S.J. Anthony, J.A. Ellison, A.T. Gilbert, I.V. Kuzmin, M. Niezgoda, and et al. Bats are a major natural reservoir for hepaciviruses and pegiviruses Proc Natl Acad Sci USA 110 2013 8194 8199
3. M. Lauck, S.D. Sibley, J. Lara, M.A. Purdy, Y. Khudyakov, D. Hyeroba, A. Tumukunde, G. Weny, W.M. Switzer, C.A. Chapman, and et al. A novel hepacivirus with an unusually long and intrinsically disordered NS5A protein in a wild Old World primate J Virol 87 2013 8971 8981
4. A. Kapoor, P. Simmonds, T.K.H. Scheel, B. Hjelle, J.M. Cullen, P.D. Burbelo, L.V. Chauhan, R. Duraisamy, M. Sanchez Leon, K. Jain, and et al. Identification of rodent homologs of hepatitis C virus and pegiviruses MBio 4 2013 e00216 e313
5. J.F. Drexler, V.M. Corman, M.A. Müller, A.N. Lukashev, A. Gmyl, B. Coutard, A. Adam, D. Ritz, L.M. Leijten, D. van Riel, and et al. Evidence for novel hepaciviruses in rodents PLoS Pathog 9 2013 e1003438
6. C. Firth, M. Bhat, M.A. Firth, S.H. Williams, M.J. Frye, P. Simmonds, J.M. Conte, J. Ng, J. Garcia, N.P. Bhuva, and et al. Detection of zoonotic pathogens and characterization of novel viruses carried by commensal Rattus norvegicus in New York city MBio 5 2014 e01933 e2014
7. A. Kapoor, P. Simmonds, G. Gerold, N. Qaisar, K. Jain, J.A. Henriquez, C. Firth, D.L. Hirschberg, C.M. Rice, S. Shields, and et al. Characterization of a canine homolog of hepatitis C virus Proc Natl Acad Sci USA 108 2011 11608 11613
8. L.M.R. El-Attar, J.A. Mitchell, H. Brooks Brownlie, S.L. Priestnall, and J. Brownlie Detection of non-primate hepaciviruses in UK dogs Virology 484 2015 93 102
9. V.M. Corman, A. Grundhoff, C. Baechlein, N. Fischer, A. Gmyl, R. Wollny, D. Dei, D. Ritz, T. Binger, E. Adankwah, and et al. Highly divergent hepaciviruses from African cattle J Virol 89 2015 5876 5882
10. C. Baechlein, N. Fischer, A. Grundhoff, M. Alawi, D. Indenbirken, A. Postel, A.L. Baron, J. Offinger, K. Becker, A. Beineke, and et al. Identification of a novel hepacivirus in domestic cattle from Germany J Virol 89 2015 7007 7015
11. P.D. Burbelo, E.J. Dubovi, P. Simmonds, J.L. Medina, J.A. Henriquez, N. Mishra, J. Wagner, R. Tokarz, J.M. Cullen, M.J. Iadarola, and et al. Serology-enabled discovery of genetically diverse hepaciviruses in a new host J Virol 86 2012 6171 6178
12. S. Lyons, A. Kapoor, C. Sharp, B.S. Schneider, N.D. Wolfe, G. Culshaw, B. Corcoran, B.C. McGorum, and P. Simmonds Nonprimate hepaciviruses in domestic horses, United Kingdom Emerg Infect Dis 18 2012 1976 1982
13. B.S. Gemaque, A. Junior Souza de Souza, M. do Carmo Pereira Soares, A.P. Malheiros, A.L. Silva, M.M. Alves, M.S. Gomes-Gouvêa, J.R.R. Pinho, H. Ferreira de Figueiredo, D.B. Ribeiro, and et al. Hepacivirus infection in domestic horses, Brazil, 2011-2013 Emerg Infect Dis 20 2014 2180 2182
14. G. Reuter, N. Maza, P. Pankovics, and Á. Boros Non-primate hepacivirus infection with apparent hepatitis in a horse Acta Vet Hung 62 2014 422 427
15. T. Tanaka, H. Kasai, A. Yamashita, K. Okuyama-Dobashi, J. Yasumoto, S. Maekawa, N. Enomoto, T. Okamoto, Y. Matsuura, M. Morimatsu, and et al. Hallmarks of hepatitis C virus in equine hepacivirus J Virol 88 2014 13352 13366
16. T.K.H. Scheel, A. Kapoor, E. Nishiuchi, K.V. Brock, Y. Yu, L. Andrus, M. Gu, R.W. Renshaw, E.J. Dubovi, S.P. McDonough, and et al. Characterization of nonprimate hepacivirus and construction of a functional molecular clone Proc Natl Acad Sci USA 112 2015 2192 2197
17. A. Matsuu, S. Hobo, K. Ando, T. Sanekata, F. Sato, Y. Endo, T. Amaya, T. Osaki, M. Horie, T. Masatani, and et al. Genetic and serological surveillance for non-primate hepacivirus in horses in Japan Vet Microbiol 179 2015 219 227
18. T.K.H. Scheel, P. Simmonds, and A. Kapoor Surveying the global virome: identification and characterization of HCV-related animal hepaciviruses Antiviral Res 115 2015 83 93
19. S.M. Horner, and M. Gale Regulation of hepatic innate immunity by hepatitis C virus Nat Med 19 2013 879 888
20. N.H. Bexfield, P.J. Watson, J. Heaney, J.L. Heeney, and L. Tiley Canine hepacivirus is not associated with chronic liver disease in dogs J Viral Hepat 21 2014 223 228
21. L.J.W. van der Laan, P.E. de Ruiter, I.M. van Gils, H. Fieten, B. Spee, Q. Pan, J. Rothuizen, and L.C. Penning Canine hepacivirus and idiopathic hepatitis in dogs from a Dutch cohort J Viral Hepat 21 2014 894 896
22. S. Lyons, A. Kapoor, B.S. Schneider, N.D. Wolfe, G. Culshaw, B. Corcoran, A.E. Durham, F. Burden, B.C. McGorum, and P. Simmonds Viraemic frequencies and seroprevalence of non-primate hepacivirus and equine pegiviruses in horses and other mammalian species J Gen Virol 95 2014 1701 1711
23. A.B. Allison, D.J. Kohler, K.A. Fox, J.D. Brown, R.W. Gerhold, V.I. Shearn-Bochsler, E.J. Dubovi, C.R. Parrish, and E.C. Holmes Frequent cross-species transmission of parvoviruses among diverse carnivore hosts J Virol 87 2013 2342 2347
24. R.R. Gray, J. Parker, P. Lemey, M. Salemi, A. Katzourakis, and O.G. Pybus The mode and tempo of hepatitis C virus evolution within and among hosts BMC Evol Biol 11 2011 131
25. G.B. Schreiber, M.P. Busch, S.H. Kleinman, and J.J. Korelitz The risk of transfusion-transmitted viral infections N Engl J Med 334 1996 1685 1690
26. T.A.B. Corley, and A. Godley The veterinary medicine industry in Britain in the twentieth century Econ Hist Rev 64 2011 832 854
27. A.J. McMichael Environmental and social influences on emerging infectious diseases: past, present and future Phil Trans R Soc B 359 2004 1049 1058
28. J. Bukh A critical role for the chimpanzee model in the study of hepatitis C Hepatology 39 2004 1469 1475
29. M. Makuwa, S. Souquiere, P. Telfer, E. Leroy, O. Bourry, P. Rouquet, S. Clifford, E.J. Wickings, P. Roques, and F. Simon Occurrence of hepatitis viruses in wild-born non-human primates: a 3 year (1998-2001) epidemiological survey in Gabon J Med Primatol 32 2003 307 314
30. O.G. Pybus, and R.R. Gray The virus whose family expanded Nature 498 2013 310 311
31. S. Pfaender, R.J.P. Brown, T. Pietschmann, and E. Steinmann Natural reservoirs for homologs of hepatitis C virus Emerg Microbes Infect 3 2014 e21
32. D.B. Smith, J. Bukh, C. Kuiken, A.S. Muerhoff, C.M. Rice, J.T. Stapleton, and P. Simmonds Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource Hepatology 59 2014 318 327
33. G. Kuno, G.J. Chang, K.R. Tsuchiya, N. Karabatsos, and C.B. Cropp Phylogeny of the genus Flavivirus J Virol 72 1998 73 83
34. D.B. Smith, S. Pathirana, F. Davidson, E. Lawlor, J. Power, P.L. Yap, and P. Simmonds The origin of hepatitis C virus genotypes J Gen Virol 78 1997 321 328
35. P. Simmonds The origin and evolution of hepatitis viruses in humans J Gen Virol 82 2001 693 712
36. O.G. Pybus, P.V. Markov, A. Wu, and A.J. Tatem Investigating the endemic transmission of the hepatitis C virus Int J Parasitol 37 2007 839 849
37. O.G. Pybus, E. Barnes, R. Taggart, P. Lemey, P.V. Markov, B. Rasachak, B. Syhavong, R. Phetsouvanah, I. Sheridan, I.S. Humphreys, and et al. Genetic history of hepatitis C virus in East Asia J Virol 83 2009 1071 1082
38. J.P. Messina, I. Humphreys, A. Flaxman, A. Brown, G.S. Cooke, O.G. Pybus, and E. Barnes Global distribution and prevalence of hepatitis C virus genotypes Hepatology 61 2015 77 87
39. A.A. Kolykhalov, E.V. Agapov, K.J. Blight, K. Mihalik, S.M. Feinstone, and C.M. Rice Transmission of hepatitis C by intrahepatic inoculation with transcribed RNA Science 277 1997 570 574
40. S. Pfaender, S. Walter, D. Todt, P. Behrendt, J. Doerrbecker, B. Woelk, M. Engelmann, U. Gravemann, A. Seltsam, J. Steinmann, and et al. Assessment of cross-species transmission of hepatitis C-related non-primate hepacivirus in a population of humans at high risk of exposure J Gen Virol 96 2015 2636 2642
41. M. Yano, H. Kumada, M. Kage, K. Ikeda, K. Shimamatsu, O. Inoue, E. Hashimoto, J.H. Lefkowitch, J. Ludwig, and K. Okuda The long-term pathological evolution of chronic hepatitis C Hepatology 23 1996 1334 1340
42. R.F. Cook, C. Leroux, and C.J. Issel Equine infectious anemia and equine infectious anemia virus in 2013: a review Vet Microbiol 167 2013 181 204
43. F. Baldacchino, M. Desquesnes, S. Mihok, L.D. Foil, G. Duvallet, and S. Jittapalapong Tabanids: Neglected subjects of research, but important vectors of disease agents! Infect Genet Evol 28 2014 596 615
44. J.W. Scott Insect transmission of swamp fever or infectious anemia of horses Wyo Agric Exp Stat Bull 133 1922 57 137
45. J.D. Ramsay, R. Evanoff, T.E. Wilkinson, T.J. Divers, D.P. Knowles, and R.H. Mealey Experimental transmission of equine hepacivirus in horses as a model for hepatitis C virus Hepatology 61 2015 1533 1546
46. A.J. Drummond, M.A. Suchard, D. Xie, and A. Rambaut Bayesian phylogenetics with BEAUti and the BEAST 1.7 Mol Biol Evol 29 2012 1969 1973
47. S. Blanga-Kanfi, H. Miranda, O. Penn, T. Pupko, R.W. DeBry, and D. Huchon Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades BMC Evol Biol 9 2009 71
48. E.C. Teeling, M.S. Springer, O. Madsen, P. Bates, S.J. O'brien, and W.J. Murphy A molecular phylogeny for bats illuminates biogeography and the fossil record Science 307 2005 580 584
49. P. Myers, R. Espinosa, C.S. Parr, T. Jones, G.S. Hammond, and T.A. Dewey The Animal Diversity Web 2015 Accessed at http://animaldiversity.org/