메뉴 건너뛰기




Volumn 28, Issue 10, 2015, Pages 1975-1986

Mechanism-Based QSAR Modeling of Skin Sensitization

Author keywords

[No Author keywords available]

Indexed keywords

1,4 BENZOQUINONE; 2,3 BUTANEDIONE; 3 AMINOPHENOL; ANETHOLE; BENZOIC ACID DERIVATIVE; BENZYL BENZOATE; BENZYL BROMIDE; BENZYLIDENEACETONE; CAMPHORQUINONE; CINNAMALDEHYDE; CITRAL; DIETHYL SULFATE; DIMETHYL SULFATE; ESTRAGOLE; ETHYLNITROSOUREA; EUGENOL; FORMALDEHYDE; GERMALL 115; GLUTARALDEHYDE; GLYOXAL; HEXOBARBITAL; HYDROXYCITRONELLAL; ISOEUGENOL; MALEIC ACID DIETHYL ESTER; MESYLIC ACID METHYL ESTER; NITROBENZENE DERIVATIVE; PERILLALDEHYDE; SALICYLIC ACID BENZYL ESTER; THIRAM; TROPOLONE; ORGANIC COMPOUND;

EID: 84944718971     PISSN: 0893228X     EISSN: 15205010     Source Type: Journal    
DOI: 10.1021/acs.chemrestox.5b00197     Document Type: Article
Times cited : (34)

References (56)
  • 1
    • 41649099510 scopus 로고    scopus 로고
    • A comparison of reactivity schemes for the prediction (of) skin sensitization potential
    • Patlewicz, G., Roberts, D. W., and Uriarte, E. (2008) A comparison of reactivity schemes for the prediction (of) skin sensitization potential Chem. Res. Toxicol. 21, 521-541 10.1021/tx700338q
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 521-541
    • Patlewicz, G.1    Roberts, D.W.2    Uriarte, E.3
  • 2
    • 13844292704 scopus 로고    scopus 로고
    • A conjugated diene identified as a prohapten: contact allergenic activity and chemical reactivity of proposed epoxide metabolites
    • Nilsson, A.-M., Bergström, M. A., Luthman, K., Nilsson, J. L. G., and Karlberg, A.-T. (2005) A conjugated diene identified as a prohapten: contact allergenic activity and chemical reactivity of proposed epoxide metabolites Chem. Res. Toxicol. 18, 308-316 10.1021/tx049758c
    • (2005) Chem. Res. Toxicol. , vol.18 , pp. 308-316
    • Nilsson, A.-M.1    Bergström, M.A.2    Luthman, K.3    Nilsson, J.L.G.4    Karlberg, A.-T.5
  • 3
    • 42049110135 scopus 로고    scopus 로고
    • Determinants of skin sensitisation potential
    • Roberts, D. W. and Aptula, A. O. (2008) Determinants of skin sensitisation potential J. Appl. Toxicol. 28, 377-387 10.1002/jat.1289
    • (2008) J. Appl. Toxicol. , vol.28 , pp. 377-387
    • Roberts, D.W.1    Aptula, A.O.2
  • 4
    • 58949101632 scopus 로고    scopus 로고
    • Nothing is perfect, not even the local lymph node assay: a commentary and the implications for REACH
    • Basketter, D. A., McFadden, J. F., Gerberick, F., Cockshott, A., and Kimber, I. (2009) Nothing is perfect, not even the local lymph node assay: a commentary and the implications for REACH Contact Dermatitis 60, 65-69 10.1111/j.1600-0536.2008.01444.x
    • (2009) Contact Dermatitis , vol.60 , pp. 65-69
    • Basketter, D.A.1    McFadden, J.F.2    Gerberick, F.3    Cockshott, A.4    Kimber, I.5
  • 5
    • 0032847626 scopus 로고    scopus 로고
    • Local lymph node assay: use in hazard and risk assessment
    • Dearman, R. J., Basketter, D. A., and Kimber, I. (1999) Local lymph node assay: use in hazard and risk assessment J. Appl. Toxicol. 19, 299-306 10.1002/(SICI)1099-1263(199909/10)19:5<299::AID-JAT591>3.0.CO;2-C
    • (1999) J. Appl. Toxicol. , vol.19 , pp. 299-306
    • Dearman, R.J.1    Basketter, D.A.2    Kimber, I.3
  • 6
    • 33745290408 scopus 로고    scopus 로고
    • Conjugated dienes as prohaptens in contact allergy: in vivo and in vitro studies of structure-activity relationships, sensitizing capacity, and metabolic activation
    • Bergström, M. A., Luthman, K., Nilsson, J. L. G., and Karlberg, A.-T. (2006) Conjugated dienes as prohaptens in contact allergy: in vivo and in vitro studies of structure-activity relationships, sensitizing capacity, and metabolic activation Chem. Res. Toxicol. 19, 760-769 10.1021/tx060006n
    • (2006) Chem. Res. Toxicol. , vol.19 , pp. 760-769
    • Bergström, M.A.1    Luthman, K.2    Nilsson, J.L.G.3    Karlberg, A.-T.4
  • 8
    • 79960148972 scopus 로고    scopus 로고
    • Risk assessment of local dermal effects and skin sensitisation under the EU chemicals regulation REACH: a proposal for a qualitative, exposure scenario specific, approach
    • Schaafsma, G., Hertsenberg, A. J., and Marquart, J. (2011) Risk assessment of local dermal effects and skin sensitisation under the EU chemicals regulation REACH: a proposal for a qualitative, exposure scenario specific, approach Regul. Toxicol. Pharmacol. 60, 308-317 10.1016/j.yrtph.2011.04.007
    • (2011) Regul. Toxicol. Pharmacol. , vol.60 , pp. 308-317
    • Schaafsma, G.1    Hertsenberg, A.J.2    Marquart, J.3
  • 10
    • 38849134167 scopus 로고    scopus 로고
    • A minireview of available skin sensitization (Q)SARs/expert systems
    • Patlewicz, G., Aptula, A. O., Roberts, D. W., and Uriarte, E. (2008) A minireview of available skin sensitization (Q)SARs/expert systems QSAR Comb. Sci. 27, 60-76 10.1002/qsar.200710067
    • (2008) QSAR Comb. Sci. , vol.27 , pp. 60-76
    • Patlewicz, G.1    Aptula, A.O.2    Roberts, D.W.3    Uriarte, E.4
  • 11
    • 33749004016 scopus 로고    scopus 로고
    • Mechanistic applicability domains for non-animal based toxicological endpoints. QSAR analysis of the Schiff base applicability domain for skin sensitization
    • Roberts, D. W., Aptula, A. O., and Patlewicz, G. (2006) Mechanistic applicability domains for non-animal based toxicological endpoints. QSAR analysis of the Schiff base applicability domain for skin sensitization Chem. Res. Toxicol. 19, 1228-1233 10.1021/tx060102o
    • (2006) Chem. Res. Toxicol. , vol.19 , pp. 1228-1233
    • Roberts, D.W.1    Aptula, A.O.2    Patlewicz, G.3
  • 12
    • 65949100117 scopus 로고    scopus 로고
    • High throughput kinetic profiling approach for covalent binding to peptides: application to skin sensitization potency of Michael acceptor electrophiles
    • Roberts, D. W. and Natsch, A. (2009) High throughput kinetic profiling approach for covalent binding to peptides: application to skin sensitization potency of Michael acceptor electrophiles Chem. Res. Toxicol. 22, 592-603 10.1021/tx800431x
    • (2009) Chem. Res. Toxicol. , vol.22 , pp. 592-603
    • Roberts, D.W.1    Natsch, A.2
  • 14
    • 84890129166 scopus 로고    scopus 로고
    • Development and validation of regression-based QSAR models for quantification of contributions of molecular fragments to skin sensitization potency of diverse organic chemicals
    • Nandy, A., Kar, S., and Roy, K. (2013) Development and validation of regression-based QSAR models for quantification of contributions of molecular fragments to skin sensitization potency of diverse organic chemicals SAR QSAR Environ. Res. 24, 1009-1013 10.1080/1062936X.2013.821422
    • (2013) SAR QSAR Environ. Res. , vol.24 , pp. 1009-1013
    • Nandy, A.1    Kar, S.2    Roy, K.3
  • 15
    • 78649769677 scopus 로고    scopus 로고
    • Chemistry based nonanimal predictive modeling for skin sensitization
    • (Devillers, J. Ed.) , Springer, Dordrecht
    • Roberts, D. W. and Patlewicz, G. (2009) Chemistry based nonanimal predictive modeling for skin sensitization, in Ecotoxicology Modeling (Devillers, J., Ed.) pp 61-83, Springer, Dordrecht.
    • (2009) Ecotoxicology Modeling , pp. 61-83
    • Roberts, D.W.1    Patlewicz, G.2
  • 16
    • 0032572025 scopus 로고    scopus 로고
    • QSAR study of the toxicity of benzoic acids to Vibrio fischeri, Daphnia magna and carp
    • Zhao, Y. H., Ji, G. D., Cronin, M. T. D., and Dearden, J. C. (1998) QSAR study of the toxicity of benzoic acids to Vibrio fischeri, Daphnia magna and carp Sci. Total Environ. 216, 205-215 10.1016/S0048-9697(98)00157-0
    • (1998) Sci. Total Environ. , vol.216 , pp. 205-215
    • Zhao, Y.H.1    Ji, G.D.2    Cronin, M.T.D.3    Dearden, J.C.4
  • 17
    • 0029622330 scopus 로고
    • QSAR study of the toxicity of nitrobenzenes to Tetrahymena pyriformis
    • Dearden, J. C., Cronin, M. T. D., Schultz, T. W., and Lin, D. T. (1995) QSAR study of the toxicity of nitrobenzenes to Tetrahymena pyriformis Quant. Struct.-Act. Relat. 14, 427-432 10.1002/qsar.19950140503
    • (1995) Quant. Struct.-Act. Relat. , vol.14 , pp. 427-432
    • Dearden, J.C.1    Cronin, M.T.D.2    Schultz, T.W.3    Lin, D.T.4
  • 18
    • 53849113018 scopus 로고    scopus 로고
    • Identification of mechanisms of toxic action for skin sensitisation using a SMARTS pattern based approach
    • Enoch, S. J., Madden, J. C., and Cronin, M. T. D. (2008) Identification of mechanisms of toxic action for skin sensitisation using a SMARTS pattern based approach SAR QSAR Environ. Res. 19, 555-578 10.1080/10629360802348985
    • (2008) SAR QSAR Environ. Res. , vol.19 , pp. 555-578
    • Enoch, S.J.1    Madden, J.C.2    Cronin, M.T.D.3
  • 19
    • 30144443263 scopus 로고    scopus 로고
    • Compilation of historical local lymph node data for evaluation of skin sensitization alternative methods
    • Gerberick, G. F., Ryan, C. A., Kern, P. S., Schlatter, H., Dearman, R. J., Kimber, I., Patlewicz, G. Y., and Basketter, D. A. (2005) Compilation of historical local lymph node data for evaluation of skin sensitization alternative methods Dermatitis 16, 157-202 10.1097/01206501-200512000-00002
    • (2005) Dermatitis , vol.16 , pp. 157-202
    • Gerberick, G.F.1    Ryan, C.A.2    Kern, P.S.3    Schlatter, H.4    Dearman, R.J.5    Kimber, I.6    Patlewicz, G.Y.7    Basketter, D.A.8
  • 20
    • 76149142138 scopus 로고    scopus 로고
    • Local lymph node data for the evaluation of skin sensitization alternatives: a second compilation
    • Kern, P. S., Gerberick, G. F., Ryan, C. A., Kimber, I., Aptula, A., and Basketer, D. A. (2010) Local lymph node data for the evaluation of skin sensitization alternatives: a second compilation Dermatitis 21, 8-32 10.2310/6620.2009.09038
    • (2010) Dermatitis , vol.21 , pp. 8-32
    • Kern, P.S.1    Gerberick, G.F.2    Ryan, C.A.3    Kimber, I.4    Aptula, A.5    Basketer, D.A.6
  • 22
    • 67949118928 scopus 로고    scopus 로고
    • How not to develop a quantitative structure-activity or structure-property relationship (QSAR/QSPR)
    • Dearden, J. C., Cronin, M. T. D., and Kaiser, K. L. E. (2009) How not to develop a quantitative structure-activity or structure-property relationship (QSAR/QSPR) SAR QSAR Environ. Res. 20, 241-266 10.1080/10629360902949567
    • (2009) SAR QSAR Environ. Res. , vol.20 , pp. 241-266
    • Dearden, J.C.1    Cronin, M.T.D.2    Kaiser, K.L.E.3
  • 24
    • 0038724207 scopus 로고    scopus 로고
    • The importance of being earnest: validation is the absolute essential for successful application and interpretation of QSPR models
    • Tropsha, A., Gramatica, P., and Gombar, V. K. (2003) The importance of being earnest: validation is the absolute essential for successful application and interpretation of QSPR models QSAR Comb. Sci. 22, 69-77 10.1002/qsar.200390007
    • (2003) QSAR Comb. Sci. , vol.22 , pp. 69-77
    • Tropsha, A.1    Gramatica, P.2    Gombar, V.K.3
  • 25
    • 20444404916 scopus 로고    scopus 로고
    • Assessing the reliability of a QSAR model's predictions
    • He, L. and Jurs, P. C. (2005) Assessing the reliability of a QSAR model's predictions J. Mol. Graphics Modell. 23, 503-523 10.1016/j.jmgm.2005.03.003
    • (2005) J. Mol. Graphics Modell. , vol.23 , pp. 503-523
    • He, L.1    Jurs, P.C.2
  • 26
    • 42749092988 scopus 로고    scopus 로고
    • The importance of the domain of applicability in QSAR modeling
    • Weaver, S. and Gleeson, M. P. (2008) The importance of the domain of applicability in QSAR modeling J. Mol. Graphics Modell. 26, 1315-1326 10.1016/j.jmgm.2008.01.002
    • (2008) J. Mol. Graphics Modell. , vol.26 , pp. 1315-1326
    • Weaver, S.1    Gleeson, M.P.2
  • 27
    • 77956964002 scopus 로고    scopus 로고
    • Best practices for QSAR model development, validation, and exploitation
    • Tropsha, A. (2010) Best practices for QSAR model development, validation, and exploitation Mol. Inf. 29, 476-488 10.1002/minf.201000061
    • (2010) Mol. Inf. , vol.29 , pp. 476-488
    • Tropsha, A.1
  • 28
    • 84865466657 scopus 로고    scopus 로고
    • Real external predictivity of QSAR models. Part 2. New intercomparable thresholds for different validation criteria and the need for scatter plot inspection
    • Chirico, N. and Gramatica, P. (2012) Real external predictivity of QSAR models. Part 2. New intercomparable thresholds for different validation criteria and the need for scatter plot inspection J. Chem. Inf. Model. 52, 2044-2058 10.1021/ci300084j
    • (2012) J. Chem. Inf. Model. , vol.52 , pp. 2044-2058
    • Chirico, N.1    Gramatica, P.2
  • 29
    • 77951050223 scopus 로고    scopus 로고
    • Evaluation of model predictive ability by external validation techniques
    • Consonni, V., Ballabio, D., and Todeschini, R. (2010) Evaluation of model predictive ability by external validation techniques J. Chemom. 24, 194-201 10.1002/cem.1290
    • (2010) J. Chemom. , vol.24 , pp. 194-201
    • Consonni, V.1    Ballabio, D.2    Todeschini, R.3
  • 30
    • 84872775982 scopus 로고    scopus 로고
    • QSAR modeling is not "push a button and find a correlation": a case study of toxicity of (benzo-)triazoles on algae
    • Gramatica, P., Cassani, S., Roy, P. P., Kovarich, S., Yap, C. W., and Papa, E. (2012) QSAR modeling is not "push a button and find a correlation": a case study of toxicity of (benzo-)triazoles on algae Mol. Inf. 31, 817-835 10.1002/minf.201200075
    • (2012) Mol. Inf. , vol.31 , pp. 817-835
    • Gramatica, P.1    Cassani, S.2    Roy, P.P.3    Kovarich, S.4    Yap, C.W.5    Papa, E.6
  • 31
    • 84857514268 scopus 로고    scopus 로고
    • Comparative studies on some metrics for external validation of QSPR models
    • Roy, K., Mitra, I., Kar, S., Ojha, P. K., Das, R. N., and Kabir, H. (2012) Comparative studies on some metrics for external validation of QSPR models J. Chem. Inf. Model. 52, 396-408 10.1021/ci200520g
    • (2012) J. Chem. Inf. Model. , vol.52 , pp. 396-408
    • Roy, K.1    Mitra, I.2    Kar, S.3    Ojha, P.K.4    Das, R.N.5    Kabir, H.6
  • 33
    • 1642380461 scopus 로고    scopus 로고
    • The problem of overfitting
    • Hawkins, D. M. (2004) The problem of overfitting J. Chem. Inf. Model. 44, 1-12 10.1021/ci0342472
    • (2004) J. Chem. Inf. Model. , vol.44 , pp. 1-12
    • Hawkins, D.M.1
  • 34
    • 34250628103 scopus 로고    scopus 로고
    • Principles of QSAR models validation: internal and external
    • Gramatica, P. (2007) Principles of QSAR models validation: internal and external QSAR Comb. Sci. 26, 694-701 10.1002/qsar.200610151
    • (2007) QSAR Comb. Sci. , vol.26 , pp. 694-701
    • Gramatica, P.1
  • 36
    • 0042355453 scopus 로고    scopus 로고
    • Rational selection of training and test sets for the development of validated QSAR models
    • Golbraikh, A., Shen, M., Xiao, Z., Xiao, Y.-D., Lee, K.-H., and Tropsha, A. (2003) Rational selection of training and test sets for the development of validated QSAR models J. Comput.-Aided Mol. Des. 17, 241-253 10.1023/A:1025386326946
    • (2003) J. Comput.-Aided Mol. Des. , vol.17 , pp. 241-253
    • Golbraikh, A.1    Shen, M.2    Xiao, Z.3    Xiao, Y.-D.4    Lee, K.-H.5    Tropsha, A.6
  • 37
    • 0043132440 scopus 로고    scopus 로고
    • Methods for reliability and uncertainty assessment and for applicability evaluations of classification- and regression-based QSARs
    • Eriksson, L., Jaworska, J., Worth, A. P., Cronin, M. T. D., McDowell, R. M., and Gramatica, P. (2003) Methods for reliability and uncertainty assessment and for applicability evaluations of classification- and regression-based QSARs Environ. Health Perspect. 111, 1361-1375 10.1289/ehp.5758
    • (2003) Environ. Health Perspect. , vol.111 , pp. 1361-1375
    • Eriksson, L.1    Jaworska, J.2    Worth, A.P.3    Cronin, M.T.D.4    McDowell, R.M.5    Gramatica, P.6
  • 42
    • 85047686957 scopus 로고    scopus 로고
    • Feature selection methods in QSAR studies
    • Goodarzi, M., Dejaegher, B., and Vander Heyden, Y. (2012) Feature selection methods in QSAR studies J. AOAC Int. 95, 636-651 10.5740/jaoacint.SGE-Goodarzi
    • (2012) J. AOAC Int. , vol.95 , pp. 636-651
    • Goodarzi, M.1    Dejaegher, B.2    Vander Heyden, Y.3
  • 46
    • 15744385505 scopus 로고    scopus 로고
    • Quantifying test-retest reliability using the intraclass correlation coefficient and the SEM
    • Weir, J. P. (2005) Quantifying test-retest reliability using the intraclass correlation coefficient and the SEM J. Strength Cond. Res. 19, 231-240 10.1519/15184.1
    • (2005) J. Strength Cond. Res. , vol.19 , pp. 231-240
    • Weir, J.P.1
  • 48
    • 84903770291 scopus 로고    scopus 로고
    • QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR
    • Chauhan, J. S., Dhanda, S. K., Singla, D., Agarwal, S. M., and Raghava, G. P. S. (2014) QSAR-based models for designing quinazoline/imidazothiazoles/pyrazolopyrimidines based inhibitors against wild and mutant EGFR PLoS One 9 (7) e101079 10.1371/journal.pone.0101079
    • (2014) PLoS One , vol.9 , Issue.7
    • Chauhan, J.S.1    Dhanda, S.K.2    Singla, D.3    Agarwal, S.M.4    Raghava, G.P.S.5
  • 49
    • 84859179256 scopus 로고    scopus 로고
    • Exploring activity cliffs in medicinal chemistry
    • Stumpfe, D. and Bajorath, J. (2012) Exploring activity cliffs in medicinal chemistry J. Med. Chem. 55, 2932-2942 10.1021/jm201706b
    • (2012) J. Med. Chem. , vol.55 , pp. 2932-2942
    • Stumpfe, D.1    Bajorath, J.2
  • 50
    • 33846889946 scopus 로고    scopus 로고
    • Electrophilic chemistry related to skin sensitization. Reaction mechanistic applicability domain classification for a published data set of 106 chemicals tested in the mouse local lymph node assay
    • Roberts, D. W., Aptula, A. O., and Patlewicz, G. (2007) Electrophilic chemistry related to skin sensitization. Reaction mechanistic applicability domain classification for a published data set of 106 chemicals tested in the mouse local lymph node assay Chem. Res. Toxicol. 20, 44-60 10.1021/tx060121y
    • (2007) Chem. Res. Toxicol. , vol.20 , pp. 44-60
    • Roberts, D.W.1    Aptula, A.O.2    Patlewicz, G.3
  • 51
    • 84893703556 scopus 로고    scopus 로고
    • Integrated testing and assessment approaches for skin sensitization: a commentary
    • Roberts, D. W. and Patlewicz, G. Y. (2014) Integrated testing and assessment approaches for skin sensitization: a commentary J. Appl. Toxicol. 34, 436-440 10.1002/jat.2943
    • (2014) J. Appl. Toxicol. , vol.34 , pp. 436-440
    • Roberts, D.W.1    Patlewicz, G.Y.2
  • 52
    • 84875363222 scopus 로고    scopus 로고
    • Allergic contact dermatitis: is the reactive chemistry of skin sensitizers the whole story? A response
    • Roberts, D. W. (2013) Allergic contact dermatitis: is the reactive chemistry of skin sensitizers the whole story? A response Contact Dermatitis 68, 245-249 10.1111/cod.12057
    • (2013) Contact Dermatitis , vol.68 , pp. 245-249
    • Roberts, D.W.1
  • 53
    • 84877966116 scopus 로고    scopus 로고
    • Predicting skin sensitization potency for Michael acceptors in the LLNA using quantum mechanics calculations
    • Enoch, S. J. and Roberts, D. W. (2013) Predicting skin sensitization potency for Michael acceptors in the LLNA using quantum mechanics calculations Chem. Res. Toxicol. 26, 767-774 10.1021/tx4000655
    • (2013) Chem. Res. Toxicol. , vol.26 , pp. 767-774
    • Enoch, S.J.1    Roberts, D.W.2
  • 54
    • 0027982335 scopus 로고
    • Hydrogen bonding. 32. An analysis of water-octanol and water-alkane partitioning and the Δlog P parameter of Seiler
    • Abraham, M. H., Chadha, H. S., Whiting, G. S., and Mitchell, R. C. (1994) Hydrogen bonding. 32. An analysis of water-octanol and water-alkane partitioning and the Δlog P parameter of Seiler J. Pharm. Sci. 83, 1085-1100 10.1002/jps.2600830806
    • (1994) J. Pharm. Sci. , vol.83 , pp. 1085-1100
    • Abraham, M.H.1    Chadha, H.S.2    Whiting, G.S.3    Mitchell, R.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.