-
1
-
-
67849122320
-
MEME SUITE: Tools for motif discovery and searching
-
BAILEY TL, BODEN M, BUSKE F A, FRITH M, GRANT CE, CLEMENTI L, REN J, LI WW, NOBLE WS (2009). MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res 37: W202-W208.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. W202-W208
-
-
Bailey, T.L.1
Boden, M.2
Buske, F.A.3
Frith, M.4
Grant, C.E.5
Clementi, L.6
Ren, J.7
Li, W.W.8
Noble, W.S.9
-
2
-
-
84855804140
-
Shadow enhancers: Frequently asked questions about distributed cis-regulatory information and enhancer redundancy
-
BAROLO S (2012). Shadow enhancers: frequently asked questions about distributed cis-regulatory information and enhancer redundancy. Bioessays 34: 135-141.
-
(2012)
Bioessays
, vol.34
, pp. 135-141
-
-
Barolo, S.1
-
3
-
-
0036107903
-
Discovery of regulatory elements by a computational method for phylogenetic footprinting
-
BLANCHETTE M, TOMPA M (2002). Discovery of regulatory elements by a computational method for phylogenetic footprinting. Genome Res 12: 739-748.
-
(2002)
Genome Res
, vol.12
, pp. 739-748
-
-
Blanchette, M.1
Tompa, M.2
-
4
-
-
0037112237
-
Nephric lineage specification by Pax2 and Pax8
-
BOUCHARD M, SOUABNI A, MANDLER M, NEUBÜSER A, BUSSLINGER M (2002). Nephric lineage specification by Pax2 and Pax8. Genes Dev 16: 2958-2970.
-
(2002)
Genes Dev
, vol.16
, pp. 2958-2970
-
-
Bouchard, M.1
Souabni, A.2
Mandler, M.3
Neubüser, A.4
Busslinger, M.5
-
5
-
-
84899735535
-
Early B-cell factor 1 is an essential transcription factor for postnatal glomerular maturation
-
FRETZ J A, NELSON T, VELAZQUEZ H, XI Y, MOECKEL GW, HOROWITZ MC (2014). Early B-cell factor 1 is an essential transcription factor for postnatal glomerular maturation. Kidney Int 85: 1091-1102.
-
(2014)
Kidney Int
, vol.85
, pp. 1091-1102
-
-
Fretz, J.A.1
Nelson, T.2
Velazquez, H.3
Xi, Y.4
Moeckel, G.W.5
Horowitz, M.C.6
-
6
-
-
0035117263
-
Molecular cloning and embryonic expression of Xenopus Six homeobox genes
-
GHANBARI H, SEO HC, FJOSE A, BRÄNDLI A W (2001). Molecular cloning and embryonic expression of Xenopus Six homeobox genes. Mech Dev 101: 271-277.
-
(2001)
Mech Dev
, vol.101
, pp. 271-277
-
-
Ghanbari, H.1
Seo, H.C.2
Fjose, A.3
Brändli, A.W.4
-
7
-
-
35648943189
-
A Hox-Eya-Pax complex regulates early kidney developmental gene expression
-
GONG K-Q, YALLOWITZ AR, SUN H, DRESSLER GR, WELLIK DM (2007). A Hox-Eya-Pax complex regulates early kidney developmental gene expression. Mol Cell Biol 27: 7661-7668.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 7661-7668
-
-
Gong, K.-Q.1
Yallowitz, A.R.2
Sun, H.3
Dressler, G.R.4
Wellik, D.M.5
-
8
-
-
79955155333
-
Canonical Wnt9b signaling balances progenitor cell expansion and differentiation during kidney development
-
KARNER CM, DAS A, MA Z, SELF M, CHEN C, LUM L, OLIVER G, CARROLL TJ (2011). Canonical Wnt9b signaling balances progenitor cell expansion and differentiation during kidney development. Development 138: 1247-1257.
-
(2011)
Development
, vol.138
, pp. 1247-1257
-
-
Karner, C.M.1
Das, A.2
Ma, Z.3
Self, M.4
Chen, C.5
Lum, L.6
Oliver, G.7
Carroll, T.J.8
-
9
-
-
33750350276
-
Long-range downstream enhancers are essential for Pax6 expression
-
KLEINJAN D A, SEAWRIGHT A, MELLA S, CARR CB, TYAS D A, SIMPSON TI, MASON JO, PRICE DJ, VAN HEYNINGEN V (2006). Long-range downstream enhancers are essential for Pax6 expression. Dev Biol 299: 563-581.
-
(2006)
Dev Biol
, vol.299
, pp. 563-581
-
-
Kleinjan, D.A.1
Seawright, A.2
Mella, S.3
Carr, C.B.4
Tyas, D.A.5
Simpson, T.I.6
Mason, J.O.7
Price, D.J.8
Van Heyningen, V.9
-
10
-
-
0029806183
-
Transgenic Xenopus embryos from sperm nuclear transplantations reveal FGF signaling requirements during gastrulation
-
KROLL KL, AMAYA E (1996). Transgenic Xenopus embryos from sperm nuclear transplantations reveal FGF signaling requirements during gastrulation. Development 122: 3173-3183.
-
(1996)
Development
, vol.122
, pp. 3173-3183
-
-
Kroll, K.L.1
Amaya, E.2
-
11
-
-
84891808382
-
JASPAR 2014: An extensively expanded and updated open-access database of transcription factor binding profiles
-
MATHELIER A, ZHAO X, ZHANG AW, PARCY F, WORSLEY-HUNT R, ARENILLAS DJ, BUCHMAN S, CHEN C, CHOU A, IENASESCU H, LIM J, SHYR C, TAN G, ZHOU M, LENHARD B, SANDELIN A, WASSERMAN WW (2014). JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic Acids Res 42: D142-D147.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D142-D147
-
-
Mathelier, A.1
Zhao, X.2
Zhang, A.W.3
Parcy, F.4
Worsley-Hunt, R.5
Arenillas, D.J.6
Buchman, S.7
Chen, C.8
Chou, A.9
Ienasescu, H.10
Lim, J.11
Shyr, C.12
Tan, G.13
Zhou, M.14
Lenhard, B.15
Sandelin, A.16
Wasserman, W.W.17
-
12
-
-
84866439490
-
Evolution of a tissue-specific silencer underlies divergence in the expression of pax2 and pax8 paralogues
-
OCHI H, TAMAI T, NAGANO H, KAWAGUCHI A, SUDOU N, OGINO H (2012). Evolution of a tissue-specific silencer underlies divergence in the expression of pax2 and pax8 paralogues. Nat Commun 3: 848.
-
(2012)
Nat Commun
, vol.3
-
-
Ochi, H.1
Tamai, T.2
Nagano, H.3
Kawaguchi, A.4
Sudou, N.5
Ogino, H.6
-
13
-
-
65349094090
-
Resources and transgenesis techniques for functional genomics in Xenopus
-
OGINO H, OCHI H (2009). Resources and transgenesis techniques for functional genomics in Xenopus. Dev Growth Differ 51: 387-401.
-
(2009)
Dev Growth Differ
, vol.51
, pp. 387-401
-
-
Ogino, H.1
Ochi, H.2
-
14
-
-
84866013368
-
Six2 and Wnt Regulate Self-Renewal and Commitment of Nephron Progenitors through Shared Gene Regulatory Networks
-
PARK J, MA W, BRIEN LLO, CHUNG E, GUO J, CHENG J, VALERIUS MT, MCMAHON JA, WONG WH, MCMAHON AP (2012). Six2 and Wnt Regulate Self-Renewal and Commitment of Nephron Progenitors through Shared Gene Regulatory Networks. Dev Cell 23: 637-651.
-
(2012)
Dev Cell
, vol.23
, pp. 637-651
-
-
Park, J.1
Ma, W.2
Brien, L.3
Chung, E.4
Guo, J.5
Cheng, J.6
Valerius, M.T.7
McMahon, J.A.8
Wong, W.H.9
McMahon, A.P.10
-
15
-
-
84891768855
-
Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments
-
PETRYSZAK R, BURDETT T, FIORELLI B, FONSECA N A, GONZALEZ-PORTA M, HASTINGS E, HUBER W, JUPP S, KEAYS M, KRYVYCH N, et al., (2014). Expression Atlas update--a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments. Nucleic Acids Res 42: D926-D932.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D926-D932
-
-
Petryszak, R.1
Burdett, T.2
Fiorelli, B.3
Fonseca, N.A.4
Gonzalez-Porta, M.5
Hastings, E.6
Huber, W.7
Jupp, S.8
Keays, M.9
Kryvych, N.10
-
16
-
-
79952027353
-
SOX9 controls epithelial branching by activating RET effector genes during kidney development
-
REGINENSI A, CLARKSON M, NEIRIJNCK Y, LU B, OHYAMA T, GROVES AK, SOCK E, WEGNER M, COSTANTINI F, CHABOISSIER M-C, SCHEDL A (2011). SOX9 controls epithelial branching by activating RET effector genes during kidney development. Hum Mol Genet 20: 1143-1153.
-
(2011)
Hum Mol Genet
, vol.20
, pp. 1143-1153
-
-
Reginensi, A.1
Clarkson, M.2
Neirijnck, Y.3
Lu, B.4
Ohyama, T.5
Groves, A.K.6
Sock, E.7
Wegner, M.8
Costantini, F.9
Chaboissier, M.-C.10
Schedl, A.11
-
17
-
-
0034020416
-
PipMaker---A Web Server for Aligning Two Genomic DNA Sequences
-
SCHWARTZ S (2000). PipMaker---A Web Server for Aligning Two Genomic DNA Sequences. Genome Res 10: 577-586.
-
(2000)
Genome Res
, vol.10
, pp. 577-586
-
-
Schwartz, S.1
-
18
-
-
33750455113
-
Six2 is required for suppression of nephrogenesis and progenitor renewal in the developing kidney
-
SELF M, LAGUTIN O V, BOWLING B, HENDRIX J, CAI Y, DRESSLER GR, OLIVER G (2006). Six2 is required for suppression of nephrogenesis and progenitor renewal in the developing kidney. EMBO J 25: 5214-5228.
-
(2006)
EMBO J
, vol.25
, pp. 5214-5228
-
-
Self, M.1
Lagutin, O.V.2
Bowling, B.3
Hendrix, J.4
Cai, Y.5
Dressler, G.R.6
Oliver, G.7
-
19
-
-
20044366725
-
Highly conserved non-coding sequences are associated with vertebrate development
-
WOOLFE A, GOODSON M, GOODE DK, SNELL P, MCEWEN GK, VAVOURI T, SMITH SF, NORTH P, CALLAWAY H, KELLY K, WALTER K, ABNIZOVA I, GILKS W, EDWARDS YJK, COOKE JE, ELGAR G (2005). Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol 3: e7
-
(2005)
Plos Biol
, vol.3
-
-
Woolfe, A.1
Goodson, M.2
Goode, D.K.3
Snell, P.4
McEwen, G.K.5
Vavouri, T.6
Smith, S.F.7
North, P.8
Callaway, H.9
Kelly, K.10
Walter, K.11
Abnizova, I.12
Gilks, W.13
Edwards, Y.14
Cooke, J.E.15
Elgar, G.16
-
20
-
-
70349786412
-
Non-homeodomain regions of Hox proteins mediate activation versus repression of Six2 via a single enhancer site in vivo
-
YALLOWITZ AR, GONG K-Q, SWINEHART IT, NELSON LT, WELLIK DM (2009). Non-homeodomain regions of Hox proteins mediate activation versus repression of Six2 via a single enhancer site in vivo. Dev Biol 335: 156-165
-
(2009)
Dev Biol
, vol.335
, pp. 156-165
-
-
Yallowitz, A.R.1
Gong, K.-Q.2
Swinehart, I.T.3
Nelson, L.T.4
Wellik, D.M.5
|