메뉴 건너뛰기




Volumn 63, Issue 5, 2015, Pages 1103-1110

Comparison of functional variants in IFNL4 and IFNL3 for association with HCV clearance

Author keywords

Genetics; IFNL3; IFNL4; IL28B; Innate immunity; Interferon lambda; Treatment; Viral clearance

Indexed keywords

INTERFERON; INTERFERON LAMBDA 3; INTERFERON LAMBDA 4; MESSENGER RNA; PEGINTERFERON ALPHA2A; RIBAVIRIN; UNCLASSIFIED DRUG; VIRUS RNA; ANTIVIRUS AGENT; IFNL4 PROTEIN, HUMAN; IL28B PROTEIN, HUMAN; INTERLEUKIN DERIVATIVE;

EID: 84943650678     PISSN: 01688278     EISSN: 16000641     Source Type: Journal    
DOI: 10.1016/j.jhep.2015.06.035     Document Type: Conference Paper
Times cited : (63)

References (43)
  • 1
    • 0037243222 scopus 로고    scopus 로고
    • IFN-lambdas mediate antiviral protection through a distinct class II cytokine receptor complex
    • S.V. Kotenko, G. Gallagher, V.V. Baurin, A. Lewis-Antes, M. Shen, N.K. Shah, and et al. IFN-lambdas mediate antiviral protection through a distinct class II cytokine receptor complex Nat Immunol 4 2003 69 77
    • (2003) Nat Immunol , vol.4 , pp. 69-77
    • Kotenko, S.V.1    Gallagher, G.2    Baurin, V.V.3    Lewis-Antes, A.4    Shen, M.5    Shah, N.K.6
  • 3
    • 63749132070 scopus 로고    scopus 로고
    • The role of genomic data in the discovery, annotation and evolutionary interpretation of the interferon-lambda family
    • B.A. Fox, P.O. Sheppard, and P.J. O'Hara The role of genomic data in the discovery, annotation and evolutionary interpretation of the interferon-lambda family PLoS One 4 2009 e4933
    • (2009) PLoS One , vol.4 , pp. e4933
    • Fox, B.A.1    Sheppard, P.O.2    O'Hara, P.J.3
  • 4
    • 84873083416 scopus 로고    scopus 로고
    • A variant upstream of IFNL3 (IL28B) creating a new interferon gene IFNL4 is associated with impaired clearance of hepatitis C virus
    • L. Prokunina-Olsson, B. Muchmore, W. Tang, R.M. Pfeiffer, H. Park, H. Dickensheets, and et al. A variant upstream of IFNL3 (IL28B) creating a new interferon gene IFNL4 is associated with impaired clearance of hepatitis C virus Nat Genet 45 2013 164 171
    • (2013) Nat Genet , vol.45 , pp. 164-171
    • Prokunina-Olsson, L.1    Muchmore, B.2    Tang, W.3    Pfeiffer, R.M.4    Park, H.5    Dickensheets, H.6
  • 5
    • 70349292099 scopus 로고    scopus 로고
    • Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance
    • D. Ge, J. Fellay, A.J. Thompson, J.S. Simon, K.V. Shianna, T.J. Urban, and et al. Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance Nature 461 2009 399 401
    • (2009) Nature , vol.461 , pp. 399-401
    • Ge, D.1    Fellay, J.2    Thompson, A.J.3    Simon, J.S.4    Shianna, K.V.5    Urban, T.J.6
  • 6
    • 70349548852 scopus 로고    scopus 로고
    • IL28B is associated with response to chronic hepatitis C interferon-alpha and ribavirin therapy
    • V. Suppiah, M. Moldovan, G. Ahlenstiel, T. Berg, M. Weltman, M.L. Abate, and et al. IL28B is associated with response to chronic hepatitis C interferon-alpha and ribavirin therapy Nat Genet 41 2009 1100 1104
    • (2009) Nat Genet , vol.41 , pp. 1100-1104
    • Suppiah, V.1    Moldovan, M.2    Ahlenstiel, G.3    Berg, T.4    Weltman, M.5    Abate, M.L.6
  • 7
    • 70349533037 scopus 로고    scopus 로고
    • Genome-wide association of IL28B with response to pegylated interferon-[alpha] and ribavirin therapy for chronic hepatitis C
    • Y. Tanaka, N. Nishida, M. Sugiyama, M. Kurosaki, K. Matsuura, N. Sakamoto, and et al. Genome-wide association of IL28B with response to pegylated interferon-[alpha] and ribavirin therapy for chronic hepatitis C Nat Genet 41 2009 1105 1109
    • (2009) Nat Genet , vol.41 , pp. 1105-1109
    • Tanaka, Y.1    Nishida, N.2    Sugiyama, M.3    Kurosaki, M.4    Matsuura, K.5    Sakamoto, N.6
  • 8
    • 70349966196 scopus 로고    scopus 로고
    • Genetic variation in IL28B and spontaneous clearance of hepatitis C virus
    • D.L. Thomas, C.L. Thio, M.P. Martin, Y. Qi, D. Ge, C. O'Huigin, and et al. Genetic variation in IL28B and spontaneous clearance of hepatitis C virus Nature 461 2009 798 801
    • (2009) Nature , vol.461 , pp. 798-801
    • Thomas, D.L.1    Thio, C.L.2    Martin, M.P.3    Qi, Y.4    Ge, D.5    O'Huigin, C.6
  • 9
    • 77949831342 scopus 로고    scopus 로고
    • Genetic variation in IL28B Is associated with chronic hepatitis C and treatment failure: A genome-wide association study
    • A. Rauch, Z. Kutalik, P. Descombes, T. Cai, J. Di Iulio, T. Mueller, and et al. Genetic variation in IL28B Is associated with chronic hepatitis C and treatment failure: a genome-wide association study Gastroenterology 138 2010 1338 1345
    • (2010) Gastroenterology , vol.138 , pp. 1338-1345
    • Rauch, A.1    Kutalik, Z.2    Descombes, P.3    Cai, T.4    Di Iulio, J.5    Mueller, T.6
  • 10
    • 84880688112 scopus 로고    scopus 로고
    • IL28B expression depends on a novel TT/-G polymorphism which improves HCV clearance prediction
    • S. Bibert, T. Roger, T. Calandra, M. Bochud, A. Cerny, N. Semmo, and et al. IL28B expression depends on a novel TT/-G polymorphism which improves HCV clearance prediction J Exp Med 210 2013 1109 1116
    • (2013) J Exp Med , vol.210 , pp. 1109-1116
    • Bibert, S.1    Roger, T.2    Calandra, T.3    Bochud, M.4    Cerny, A.5    Semmo, N.6
  • 11
    • 84891870231 scopus 로고    scopus 로고
    • IFNL4 ss469415590 variant is a better predictor than rs12979860 of pegylated interferon-alpha/ribavirin therapy failure in hepatitis C virus/HIV-1 coinfected patients
    • S. Franco, E. Aparicio, M. Parera, B. Clotet, C. Tural, and M.A. Martinez IFNL4 ss469415590 variant is a better predictor than rs12979860 of pegylated interferon-alpha/ribavirin therapy failure in hepatitis C virus/HIV-1 coinfected patients AIDS 28 2014 133 136
    • (2014) AIDS , vol.28 , pp. 133-136
    • Franco, S.1    Aparicio, E.2    Parera, M.3    Clotet, B.4    Tural, C.5    Martinez, M.A.6
  • 12
    • 84890951661 scopus 로고    scopus 로고
    • The favorable IFNL3 genotype escapes mRNA decay mediated by AU-rich elements and hepatitis C virus-induced microRNAs
    • A.P. McFarland, S.M. Horner, A. Jarret, R.C. Joslyn, E. Bindewald, B.A. Shapiro, and et al. The favorable IFNL3 genotype escapes mRNA decay mediated by AU-rich elements and hepatitis C virus-induced microRNAs Nat Immunol 15 2014 72 79
    • (2014) Nat Immunol , vol.15 , pp. 72-79
    • McFarland, A.P.1    Horner, S.M.2    Jarret, A.3    Joslyn, R.C.4    Bindewald, E.5    Shapiro, B.A.6
  • 13
    • 85027933982 scopus 로고    scopus 로고
    • Differential microRNA regulation of HLA-C expression and its association with HIV control
    • S. Kulkarni, R. Savan, Y. Qi, X. Gao, Y. Yuki, S.E. Bass, and et al. Differential microRNA regulation of HLA-C expression and its association with HIV control Nature 472 2011 495 498
    • (2011) Nature , vol.472 , pp. 495-498
    • Kulkarni, S.1    Savan, R.2    Qi, Y.3    Gao, X.4    Yuki, Y.5    Bass, S.E.6
  • 14
    • 84866084186 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms can create alternative polyadenylation signals and affect gene expression through loss of microRNA-regulation
    • L.F. Thomas, and P. Sætrom Single nucleotide polymorphisms can create alternative polyadenylation signals and affect gene expression through loss of microRNA-regulation PLoS Comput Biol 8 2012 e1002621
    • (2012) PLoS Comput Biol , vol.8 , pp. e1002621
    • Thomas, L.F.1    Sætrom, P.2
  • 15
    • 33746535101 scopus 로고    scopus 로고
    • Peginterferon and ribavirin treatment in African American and Caucasian American patients with hepatitis C genotype 1
    • H.S. Conjeevaram, M.W. Fried, L.J. Jeffers, N.A. Terrault, T.E. Wiley-Lucas, N. Afdhal, and et al. Peginterferon and ribavirin treatment in African American and Caucasian American patients with hepatitis C genotype 1 Gastroenterology 131 2006 470 477
    • (2006) Gastroenterology , vol.131 , pp. 470-477
    • Conjeevaram, H.S.1    Fried, M.W.2    Jeffers, L.J.3    Terrault, N.A.4    Wiley-Lucas, T.E.5    Afdhal, N.6
  • 17
    • 4644286380 scopus 로고    scopus 로고
    • Evolution of the HALT-C trial: Pegylated interferon as maintenance therapy for chronic hepatitis C in previous interferon nonresponders
    • W.M. Lee, J.L. Dienstag, K.L. Lindsay, A.S. Lok, H.L. Bonkovsky, M.L. Shiffman, and et al. Evolution of the HALT-C trial: pegylated interferon as maintenance therapy for chronic hepatitis C in previous interferon nonresponders Control Clin Trials 25 2004 472 492
    • (2004) Control Clin Trials , vol.25 , pp. 472-492
    • Lee, W.M.1    Dienstag, J.L.2    Lindsay, K.L.3    Lok, A.S.4    Bonkovsky, H.L.5    Shiffman, M.L.6
  • 18
    • 84889633412 scopus 로고    scopus 로고
    • Association of the IFNL4-ΔG allele with impaired spontaneous clearance of hepatitis C virus
    • P.V. Aka, M.H. Kuniholm, R.M. Pfeiffer, A.S. Wang, W. Tang, S. Chen, and et al. Association of the IFNL4-ΔG allele with impaired spontaneous clearance of hepatitis C virus J Infect Dis 209 2014 350 354
    • (2014) J Infect Dis , vol.209 , pp. 350-354
    • Aka, P.V.1    Kuniholm, M.H.2    Pfeiffer, R.M.3    Wang, A.S.4    Tang, W.5    Chen, S.6
  • 19
    • 0026357723 scopus 로고
    • The ALIVE study, a longitudinal study of HIV-1 infection in intravenous drug users: Description of methods and characteristics of participants
    • D. Vlahov, J.C. Anthony, A. Munoz, J. Margolick, K.E. Nelson, D.D. Celentano, and et al. The ALIVE study, a longitudinal study of HIV-1 infection in intravenous drug users: description of methods and characteristics of participants NIDA Res Monogr 109 1991 75 100
    • (1991) NIDA Res Monogr , vol.109 , pp. 75-100
    • Vlahov, D.1    Anthony, J.C.2    Munoz, A.3    Margolick, J.4    Nelson, K.E.5    Celentano, D.D.6
  • 20
    • 0028915770 scopus 로고
    • HIV seroprevalence in injection drug users
    • J.K. Watters, R.N. Bluthenthal, and A.H. Kral HIV seroprevalence in injection drug users JAMA 273 1995 1178
    • (1995) JAMA , vol.273 , pp. 1178
    • Watters, J.K.1    Bluthenthal, R.N.2    Kral, A.H.3
  • 21
    • 34548775662 scopus 로고    scopus 로고
    • Seroprevalence of hepatitis C virus and hepatitis B virus among San Francisco injection drug users, 1998 to 2000
    • F.C. Tseng, T.R. O'Brien, M. Zhang, A.H. Kral, B.A. Ortiz-Conde, J. Lorvick, and et al. Seroprevalence of hepatitis C virus and hepatitis B virus among San Francisco injection drug users, 1998 to 2000 Hepatology 46 2007 666 671
    • (2007) Hepatology , vol.46 , pp. 666-671
    • Tseng, F.C.1    O'Brien, T.R.2    Zhang, M.3    Kral, A.H.4    Ortiz-Conde, B.A.5    Lorvick, J.6
  • 22
    • 24944575162 scopus 로고    scopus 로고
    • The Women's Interagency HIV Study: An observational cohort brings clinical sciences to the bench
    • M.C. Bacon, V. von Wyl, C. Alden, G. Sharp, E. Robison, N. Hessol, and et al. The Women's Interagency HIV Study: an observational cohort brings clinical sciences to the bench Clin Diagn Lab Immunol 12 2005 1013 1019
    • (2005) Clin Diagn Lab Immunol , vol.12 , pp. 1013-1019
    • Bacon, M.C.1    Von Wyl, V.2    Alden, C.3    Sharp, G.4    Robison, E.5    Hessol, N.6
  • 24
    • 65649134135 scopus 로고    scopus 로고
    • Early changes in hepatitis C virus (HCV) levels in response to peginterferon and ribavirin treatment in patients with chronic HCV genotype 1 infection
    • J.H. Hoofnagle, A.S. Wahed, R.S. Brown, C.D. Howell, and S.H. Bellw Early changes in hepatitis C virus (HCV) levels in response to peginterferon and ribavirin treatment in patients with chronic HCV genotype 1 infection J Infect Dis 199 2009 1112 1120
    • (2009) J Infect Dis , vol.199 , pp. 1112-1120
    • Hoofnagle, J.H.1    Wahed, A.S.2    Brown, R.S.3    Howell, C.D.4    Bellw, S.H.5
  • 25
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • J.C. Barrett, B. Fry, J. Maller, and M.J. Daly Haploview: analysis and visualization of LD and haplotype maps Bioinformatics 21 2005 263 265
    • (2005) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 27
    • 84856681731 scopus 로고    scopus 로고
    • Deciphering the interleukin 28B variants that better predict response to pegylated interferon-α and ribavirin therapy in HCV/HIV-1 coinfected patients
    • M. de Castellarnau, E. Aparicio, M. Parera, S. Franco, C. Tural, B. Clotet, and et al. Deciphering the interleukin 28B variants that better predict response to pegylated interferon-α and ribavirin therapy in HCV/HIV-1 coinfected patients PLoS One 7 2012 e31016
    • (2012) PLoS One , vol.7 , pp. e31016
    • De Castellarnau, M.1    Aparicio, E.2    Parera, M.3    Franco, S.4    Tural, C.5    Clotet, B.6
  • 28
    • 84862267413 scopus 로고    scopus 로고
    • Analysis of IL28B variants in an Egyptian population defines the 20 kilobases minimal region involved in spontaneous clearance of hepatitis C virus
    • V. Pedergnana, M. Abdel-Hamid, J. Guergnon, A. Mohsen, L. Le Fouler, I. Theodorou, and et al. Analysis of IL28B variants in an Egyptian population defines the 20 kilobases minimal region involved in spontaneous clearance of hepatitis C virus PLoS One 7 2012 e38578
    • (2012) PLoS One , vol.7 , pp. e38578
    • Pedergnana, V.1    Abdel-Hamid, M.2    Guergnon, J.3    Mohsen, A.4    Le Fouler, L.5    Theodorou, I.6
  • 29
    • 84936848014 scopus 로고    scopus 로고
    • Reduced IFNλ4 activity is associated with improved HCV clearance and reduced expression of interferon-stimulated genes
    • E. Terczyńska-Dyla, S. Bibert, F.H.T. Duong, I. Krol, S. Jørgensen, E. Collinet, and et al. Reduced IFNλ4 activity is associated with improved HCV clearance and reduced expression of interferon-stimulated genes Nat Commun 5 2014 5699
    • (2014) Nat Commun , vol.5 , pp. 5699
    • Terczyńska-Dyla, E.1    Bibert, S.2    Duong, F.H.T.3    Krol, I.4    Jørgensen, S.5    Collinet, E.6
  • 30
    • 84895930916 scopus 로고    scopus 로고
    • Nonsynonymous variant Pro70Ser (rs117648444) in IFNL4 gene identifies carriers of the rs368234815 Δg allele with higher HCV RNA decline during the first 4 weeks of pegylated interferon and ribavirin therapy in HCV-1 patients
    • E. Galmozzi, and A. Aghemo Nonsynonymous variant Pro70Ser (rs117648444) in IFNL4 gene identifies carriers of the rs368234815 ΔG allele with higher HCV RNA decline during the first 4 weeks of pegylated interferon and ribavirin therapy in HCV-1 patients J Clin Virol 59 2014 274 275
    • (2014) J Clin Virol , vol.59 , pp. 274-275
    • Galmozzi, E.1    Aghemo, A.2
  • 31
    • 84908335988 scopus 로고    scopus 로고
    • Selection on a variant associated with improved viral clearance drives local, adaptive pseudogenization of interferon lambda 4 (IFNL4)
    • F.M. Key, B. Peter, M.Y. Dennis, E. Huerta-Sánchez, W. Tang, L. Prokunina-Olsson, and et al. Selection on a variant associated with improved viral clearance drives local, adaptive pseudogenization of interferon lambda 4 (IFNL4) PLoS Genet 10 2014 e1004681
    • (2014) PLoS Genet , vol.10 , pp. e1004681
    • Key, F.M.1    Peter, B.2    Dennis, M.Y.3    Huerta-Sánchez, E.4    Tang, W.5    Prokunina-Olsson, L.6
  • 34
    • 84888876575 scopus 로고    scopus 로고
    • Interferon lambda 4 signals via the IFNλ receptor to regulate antiviral activity against HCV and coronaviruses
    • O.J. Hamming, E. Terczyńska-Dyla, G. Vieyres, R. Dijkman, S.E. Jørgensen, H. Akhtar, and et al. Interferon lambda 4 signals via the IFNλ receptor to regulate antiviral activity against HCV and coronaviruses EMBO J 32 2013 3055 3065
    • (2013) EMBO J , vol.32 , pp. 3055-3065
    • Hamming, O.J.1    Terczyńska-Dyla, E.2    Vieyres, G.3    Dijkman, R.4    Jørgensen, S.E.5    Akhtar, H.6
  • 35
    • 84898634396 scopus 로고    scopus 로고
    • Therapy for hepatitis C - The costs of success
    • J.H. Hoofnagle, and A.H. Sherker Therapy for hepatitis C - the costs of success N Engl J Med 370 2014 1552 1553
    • (2014) N Engl J Med , vol.370 , pp. 1552-1553
    • Hoofnagle, J.H.1    Sherker, A.H.2
  • 37
    • 84899084678 scopus 로고    scopus 로고
    • IFNL4-ΔG genotype is associated with slower viral clearance in hepatitis C, genotype-1 patients treated with sofosbuvir and ribavirin
    • E.G. Meissner, D. Bon, L. Prokunina-Olsson, W. Tang, H. Masur, T.R. O'Brien, and et al. IFNL4-ΔG genotype is associated with slower viral clearance in hepatitis C, genotype-1 patients treated with sofosbuvir and ribavirin J Infect Dis 209 2014 1700 1704
    • (2014) J Infect Dis , vol.209 , pp. 1700-1704
    • Meissner, E.G.1    Bon, D.2    Prokunina-Olsson, L.3    Tang, W.4    Masur, H.5    O'Brien, T.R.6
  • 39
    • 84978328245 scopus 로고    scopus 로고
    • Subgroup differences in response to 8 weeks of ledipasvir/sofosbuvir for chronic hepatitis C
    • T.R. O'Brien, K.A. Lang Kuhs, and R.M. Pfeiffer Subgroup differences in response to 8 weeks of ledipasvir/sofosbuvir for chronic hepatitis C Open Forum Infect Dis 1 2014
    • (2014) Open Forum Infect Dis , vol.1
    • O'Brien, T.R.1    Lang Kuhs, K.A.2    Pfeiffer, R.M.3
  • 41
    • 84978328162 scopus 로고    scopus 로고
    • Reply: Subgroup differences in response to 8 weeks of ledipasvir/sofosbuvir for chronic hepatitis C
    • T.R. O'Brien, and R.M. Pfeiffer Reply: subgroup differences in response to 8 weeks of ledipasvir/sofosbuvir for chronic hepatitis C Open Forum Infect Dis 2 2015
    • (2015) Open Forum Infect Dis , vol.2
    • O'Brien, T.R.1    Pfeiffer, R.M.2
  • 42
    • 84946494652 scopus 로고    scopus 로고
    • Hepatitis C guidance: AASLD-IDSA recommendations for testing, managing, and treating adults infected with hepatitis C virus
    • Idsa Hcv Guidance Panel A. [Epub ahead of print]
    • AASLD IDSA HCV Guidance Panel Hepatitis C guidance: AASLD-IDSA recommendations for testing, managing, and treating adults infected with hepatitis C virus Hepatology 2015 [Epub ahead of print]
    • (2015) Hepatology
  • 43
    • 84931560807 scopus 로고    scopus 로고
    • EASL recommendations on treatment of hepatitis C 2015
    • EASL recommendations on treatment of hepatitis C 2015 J Hepatol 63 2015 199 236
    • (2015) J Hepatol , vol.63 , pp. 199-236


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.