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Volumn 108, Issue 2, 2015, Pages 311-320

Modestobacter lapidis sp. nov. and Modestobacter muralis sp. nov., isolated from a deteriorated sandstone historic building in Salamanca, Spain

Author keywords

Deteriorating sandstone; Modestobacter; Polyphasic taxonomy

Indexed keywords

FATTY ACID; RNA 16S; BACTERIAL DNA; RIBOSOME DNA;

EID: 84943355156     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-015-0482-7     Document Type: Article
Times cited : (14)

References (40)
  • 1
    • 0014725990 scopus 로고
    • Ein neues knospendes Bakterium aus der Ostsee
    • Ahrens R, Moll G (1970) Ein neues knospendes Bakterium aus der Ostsee. Arch Mikrobiol 70: 243-263.
    • (1970) Arch Mikrobiol , vol.70 , pp. 243-263
    • Ahrens, R.1    Moll, G.2
  • 2
    • 84856632691 scopus 로고    scopus 로고
    • Diversity of Micromonospora strains isolated from nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis
    • Carro L, Spröer C, Alonso P, Trujillo ME (2012) Diversity of Micromonospora strains isolated from nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis. Syst Appl Microbiol 35: 73-80.
    • (2012) Syst Appl Microbiol , vol.35 , pp. 73-80
    • Carro, L.1    Spröer, C.2    Alonso, P.3    Trujillo, M.E.4
  • 3
    • 84861352735 scopus 로고    scopus 로고
    • Genome sequence of Blastococcus saxobsidens DD2, a stone inhibiting bacterium
    • Chouaia B, Crotti E, Brusetti L et al (2012) Genome sequence of Blastococcus saxobsidens DD2, a stone inhibiting bacterium. J Bacteriol 194: 2752-2753.
    • (2012) J Bacteriol , vol.194 , pp. 2752-2753
    • Chouaia, B.1    Crotti, E.2    Brusetti, L.3
  • 4
    • 0029748269 scopus 로고    scopus 로고
    • Morphological, physiological and molecular characterization of actinomycetes isolated from dry soil, rocks and monument surfaces
    • Eppard M, Krumbein WE, Koch C, Rhiel E, Staley JT, Stackebrandt E (1996) Morphological, physiological and molecular characterization of actinomycetes isolated from dry soil, rocks and monument surfaces. Arch Microbiol 166: 12-22.
    • (1996) Arch Microbiol , vol.166 , pp. 12-22
    • Eppard, M.1    Krumbein, W.E.2    Koch, C.3    Rhiel, E.4    Staley, J.T.5    Stackebrandt, E.6
  • 6
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 7
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 383-391.
    • (1985) Evolution , vol.39 , pp. 383-391
    • Felsenstein, J.1
  • 8
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20: 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 84860652821 scopus 로고    scopus 로고
    • Contrasted resistance of stone dwelling Geodermatophilaceae species to stresses known to give rise to reactive oxygen species
    • Gtari M, Essoussi I, Maaoui R, Sghaier H, Boujmil R et al (2012) Contrasted resistance of stone dwelling Geodermatophilaceae species to stresses known to give rise to reactive oxygen species. FEMS Microbiol Ecol 80: 566-577.
    • (2012) FEMS Microbiol Ecol , vol.80 , pp. 566-577
    • Gtari, M.1    Essoussi, I.2    Maaoui, R.3    Sghaier, H.4    Boujmil, R.5
  • 10
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa T, Takizawa M, Tamida S (1983) A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29: 319-322.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tamida, S.3
  • 11
    • 0000601431 scopus 로고
    • Fresh isolates of actinomycetes in which the presence of the sporogenous aerial mycelia is a fluctuating characteristic
    • Jones K (1949) Fresh isolates of actinomycetes in which the presence of the sporogenous aerial mycelia is a fluctuating characteristic. J Bacteriol 57: 141-145.
    • (1949) J Bacteriol , vol.57 , pp. 141-145
    • Jones, K.1
  • 13
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 15
    • 0014355263 scopus 로고
    • Geodermatophilus, a new genus of the Dermatophilaceae (Actinomycetes)
    • Luedemann GM (1968) Geodermatophilus, a new genus of the Dermatophilaceae (Actinomycetes). J Bacteriol 96: 1848-1858.
    • (1968) J Bacteriol , vol.96 , pp. 1848-1858
    • Luedemann, G.M.1
  • 16
    • 0342744454 scopus 로고
    • Micromonospora purpureochromogenes (Waksman and Curtis 1916) comb. Nov. (subjective synonym, Micromonospora fusca Jensen 1932)
    • Luedemann GM (1971) Micromonospora purpureochromogenes (Waksman and Curtis 1916) comb. Nov. (subjective synonym, Micromonospora fusca Jensen 1932). Int J Syst Bacteriol 21: 240-247.
    • (1971) Int J Syst Bacteriol , vol.21 , pp. 240-247
    • Luedemann, G.M.1
  • 17
    • 77956996468 scopus 로고
    • Use of ultraviolet absorbance temperature profile for determining the guanine plus cytosine content of DNA
    • Mandel M, Marmur J (1968) Use of ultraviolet absorbance temperature profile for determining the guanine plus cytosine content of DNA. Methods Enzymol 12B: 195-206.
    • (1968) Methods Enzymol , vol.12 B , pp. 195-206
    • Mandel, M.1    Marmur, J.2
  • 19
    • 0033983202 scopus 로고    scopus 로고
    • Modestobacter multiseptatus sp. nov., a budding actinomycete from soils of the Asgard Range (Transantarctic Mountains)
    • Mevs U, Stackebrandt E, Schumann P, Gallikowski CA, Hirsch P (2000) Modestobacter multiseptatus sp. nov., a budding actinomycete from soils of the Asgard Range (Transantarctic Mountains). Int J Syst Evol Microbiol 50: 337-346.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 337-346
    • Mevs, U.1    Stackebrandt, E.2    Schumann, P.3    Gallikowski, C.A.4    Hirsch, P.5
  • 23
    • 33750026977 scopus 로고    scopus 로고
    • Geodermatophilaceae fam. nov., a formal description
    • Normand P (2006) Geodermatophilaceae fam. nov., a formal description. Int J Syst Evol Microbiol 56: 2277-2278.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2277-2278
    • Normand, P.1
  • 24
    • 84910024391 scopus 로고    scopus 로고
    • Family IV. Geodermatophilaceae 2006, 2277VP (Effective publication: Normand, Orso, Jeannin, Chapelon, Dawson, Evtuschenko and Misra, 1996, 8)
    • Goodfellow M, Kämpfer P, Busse H-J, Trujillo MR, Suzuki K-I, Ludwig W, Whitman WB (eds), Springer, New York
    • Normand P, Benson DR (2012) Family IV. Geodermatophilaceae 2006, 2277VP (Effective publication: Normand, Orso, Jeannin, Chapelon, Dawson, Evtuschenko and Misra, 1996, 8). In: Goodfellow M, Kämpfer P, Busse H-J, Trujillo MR, Suzuki K-I, Ludwig W, Whitman WB (eds) Bergey's manual of systematic bacteriology, Part A, vol 5, 2nd edn. Springer, New York, p 528.
    • (2012) Bergey's manual of systematic bacteriology, Part A, vol 5, 2nd edn
    • Normand, P.1    Benson, D.R.2
  • 25
    • 84878847897 scopus 로고    scopus 로고
    • Modestobacter roseus sp. nov., an endophytic actinomycete isolated from the coastal halophyte Salicornia europea Linn, and emended description of the genus Modestobacter
    • Qin S, Bian G-K, Zhang Y-J, Ying K, Cao C-L, Liu C-H, Dai C-C, Jiang J-H (2013) Modestobacter roseus sp. nov., an endophytic actinomycete isolated from the coastal halophyte Salicornia europea Linn, and emended description of the genus Modestobacter. Int J Syst Microbiol 63: 2197-2202.
    • (2013) Int J Syst Microbiol , vol.63 , pp. 2197-2202
    • Qin, S.1    Bian, G.-K.2    Zhang, Y.-J.3    Ying, K.4    Cao, C.-L.5    Liu, C.-H.6    Dai, C.-C.7    Jiang, J.-H.8
  • 26
    • 34848866067 scopus 로고    scopus 로고
    • Modestobacter versicolor sp. nov., an actinobacterium from biological soil crusts that produce melanins under oligotrophy, with emended descriptions of the genus Modestobacter and Modestobacter multiseptatus Mevs et al. 2000
    • Reddy GSN, Potrafka RM, Garcia-Pichel F (2007) Modestobacter versicolor sp. nov., an actinobacterium from biological soil crusts that produce melanins under oligotrophy, with emended descriptions of the genus Modestobacter and Modestobacter multiseptatus Mevs et al. 2000. Int J Syst Evol Microbiol 57: 2000-2014.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2000-2014
    • Reddy, G.S.N.1    Potrafka, R.M.2    Garcia-Pichel, F.3
  • 27
    • 83155188486 scopus 로고    scopus 로고
    • Microscopy
    • Rohde A (2011) Microscopy. Methods Microbiol 38: 61-100.
    • (2011) Methods Microbiol , vol.38 , pp. 61-100
    • Rohde, A.1
  • 28
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for constructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbour-joining method: a new method for constructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 30
    • 84910047591 scopus 로고    scopus 로고
    • Phylogeny of the class Actinobacteria revisited in light of complete genomes. The orders 'Frankiales' and Micrococcales should be split into coherent entities: Proposal of Frankiales ord. nov., Geodermatophilales ord. nov, Acidothermales ord. nov. and Nakamurellales ord. nov
    • Sen A, Daubin E, Abbro D, Gifford I, Berry AM, Normand P (2014) Phylogeny of the class Actinobacteria revisited in light of complete genomes. The orders 'Frankiales' and Micrococcales should be split into coherent entities: proposal of Frankiales ord. nov., Geodermatophilales ord. nov, Acidothermales ord. nov. and Nakamurellales ord. nov. Int J Syst Evol Microbiol 64: 3821-3832.
    • (2014) Int J Syst Evol Microbiol , vol.64 , pp. 3821-3832
    • Sen, A.1    Daubin, E.2    Abbro, D.3    Gifford, I.4    Berry, A.M.5    Normand, P.6
  • 31
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16: 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 32
    • 51249194274 scopus 로고
    • A simple method for the detection of lipolytic activity of microorganisms and some observations on the influence of contact between cells and fatty substrates
    • Sierra G (1957) A simple method for the detection of lipolytic activity of microorganisms and some observations on the influence of contact between cells and fatty substrates. Antonie Van Leeuwenhoek 23: 15-22.
    • (1957) Antonie Van Leeuwenhoek , vol.23 , pp. 15-22
    • Sierra, G.1
  • 33
    • 0016202002 scopus 로고
    • Simplified approach to the identification of aerobic actinomycetes by thin-layer chromatography
    • Staneck JL, Roberts GD (1974) Simplified approach to the identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28: 226-231.
    • (1974) Appl Microbiol , vol.28 , pp. 226-231
    • Staneck, J.L.1    Roberts, G.D.2
  • 34
    • 79957613599 scopus 로고    scopus 로고
    • MEGA 5: Molecular evolution genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecker G, Nei M, Kumar S (2011) MEGA 5: molecular evolution genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecker, G.4    Nei, M.5    Kumar, S.6
  • 36
    • 0035210325 scopus 로고    scopus 로고
    • Biodiversity of Geodermatophilaceae isolated from altered stones and monuments in the Mediterranean basin
    • Urzi C, Brusetti P, Salamone C, Sorlini F, Stackebrandt E, Daffenchio D (2001) Biodiversity of Geodermatophilaceae isolated from altered stones and monuments in the Mediterranean basin. Environ Microbiol 3: 471-479.
    • (2001) Environ Microbiol , vol.3 , pp. 471-479
    • Urzi, C.1    Brusetti, P.2    Salamone, C.3    Sorlini, F.4    Stackebrandt, E.5    Daffenchio, D.6
  • 37
    • 3042701609 scopus 로고    scopus 로고
    • Design and application of two oligonucleotide probes in the identification of Geodermatophilaceae strains using fluorescence in situ hybridization
    • Urzi C, La Cono V, Stackebrandt E (2004) Design and application of two oligonucleotide probes in the identification of Geodermatophilaceae strains using fluorescence in situ hybridization. Environ Microbiol 6: 678-685.
    • (2004) Environ Microbiol , vol.6 , pp. 678-685
    • Urzi, C.1    La Cono, V.2    Stackebrandt, E.3
  • 38
    • 0027992990 scopus 로고
    • Genomic fingerprinting of bacteria using repetitive sequencebased polymerase chain reaction
    • Versalovic J, Scheider M, De Bruijn FJ, Lupski JR (1994) Genomic fingerprinting of bacteria using repetitive sequencebased polymerase chain reaction. Methods Mol Cell Biol 5: 25-40.
    • (1994) Methods Mol Cell Biol , vol.5 , pp. 25-40
    • Versalovic, J.1    Scheider, M.2    De Bruijn, F.J.3    Lupski, J.R.4
  • 39
    • 0000770675 scopus 로고
    • International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O et al (1987) International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37: 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3    Grimont, P.A.D.4    Kandler, O.5
  • 40
    • 79960195556 scopus 로고    scopus 로고
    • Modestobacter marinus sp. nov., a psychrotolerant actinobacterium from deep-sea, and emended description of the genus Modestobacter
    • Xiao J, Luo Y, Yu J, Xie J (2011) Modestobacter marinus sp. nov., a psychrotolerant actinobacterium from deep-sea, and emended description of the genus Modestobacter. Int J Syst Evol Microbiol 61: 1704-17010.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 1704-17010
    • Xiao, J.1    Luo, Y.2    Yu, J.3    Xie, J.4


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