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Volumn 101, Issue 4, 2012, Pages 811-817

Geodermatophilus nigrescens sp. nov., isolated from a dry-hot valley

Author keywords

16S rRNA gene; Geodermatophilus nigrescens sp. nov.; Polyphasic taxonomy

Indexed keywords

ARABINOSE; CYTOSINE; DIAMINO ACID; DIAMINOPIMELIC ACID; DNA; FATTY ACID; GALACTOSE; GENOMIC DNA; GLUCOSAMINE; GUANOSINE; MENAQUINONE; PEPTIDOGLYCAN;

EID: 84862789311     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-012-9696-0     Document Type: Article
Times cited : (44)

References (36)
  • 6
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki T, Hashimoto Y, Yabuuchi E (1989) Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224-229
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 7
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • DOI 10.1007/BF01734359
    • Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368-376 (Pubitemid 11016207)
    • (1981) Journal of Molecular Evolution , vol.17 , Issue.6 , pp. 368-376
    • Felsenstein, J.1
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-789
    • (1985) Evolution , vol.39 , pp. 783-789
    • Felsenstein, J.1
  • 9
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20:406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 13
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • DOI 10.1007/BF01731581
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120 (Pubitemid 11166431)
    • (1980) Journal of Molecular Evolution , vol.16 , Issue.2 , pp. 111-120
    • Kimura, M.1
  • 15
    • 0001440003 scopus 로고
    • Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases
    • Kroppenstedt RM (1982) Separation of bacterial menaquinones by HPLC using reverse phase (RP18) and a silver loaded ion exchanger as stationary phases. J Liq Chromatogr 5:2359-2367
    • (1982) J Liq Chromatogr , vol.5 , pp. 2359-2367
    • Kroppenstedt, R.M.1
  • 16
    • 0011273199 scopus 로고
    • Actinomycetes with multilocular sporangia
    • Williams ST, Sharpe ME, Holt JG (eds). Williams & Wilkins, Baltimore
    • Lechevalier MP (1989) Actinomycetes with multilocular sporangia. In: Williams ST, Sharpe ME, Holt JG (eds) Bergey's manual of systematic bacteriology, vol 4. Williams & Wilkins, Baltimore, pp 2405-2417
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.4 , pp. 2405-2417
    • Lechevalier, M.P.1
  • 18
    • 0014355263 scopus 로고
    • Geodermatophilus, a new genus of the Dermatophilaceae (Actinomycetales)
    • Luedemann GM (1968) Geodermatophilus, a new genus of the Dermatophilaceae (Actinomycetales). Bacteriology 96:1848-1858
    • (1968) Bacteriology , vol.96 , pp. 1848-1858
    • Luedemann, G.M.1
  • 19
    • 0000198211 scopus 로고
    • Precise measurement of the G? C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G? C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159-167
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 21
    • 0018393563 scopus 로고
    • Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa
    • Minnikin DE, Collins MD, Goodfellow M (1979) Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47:87-95 (Pubitemid 9239553)
    • (1979) Journal of Applied Bacteriology , vol.47 , Issue.1 , pp. 87-95
    • Minnikin, D.E.1    Collins, M.D.2    Goodfellow, M.3
  • 22
    • 0021182575 scopus 로고
    • An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
    • Minnikin DE, O'Donnell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, Parlett JH (1984) An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2:233-241 (Pubitemid 14058168)
    • (1984) Journal of Microbiological Methods , vol.2 , Issue.5 , pp. 233-241
    • Minnikin, D.E.1    O'Donnell, A.G.2    Goodfellow, M.3
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic tree
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic tree. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 27
    • 0141810217 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Sasser M (1990) Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20:16
    • (1990) USFCC Newsl , vol.20 , pp. 16
    • Sasser, M.1
  • 28
    • 0015462556 scopus 로고
    • Peptidoglycan types of bacterial cell walls and their taxonomic implications
    • Schleifer KH, Kandler O (1972) Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36:407-477
    • (1972) Bacteriol Rev , vol.36 , pp. 407-477
    • Schleifer, K.H.1    Kandler, O.2
  • 29
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313-340
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 30
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846-849 (Pubitemid 24315169)
    • (1994) International Journal of Systematic Bacteriology , vol.44 , Issue.4 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 31
    • 0016202002 scopus 로고
    • Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography
    • Staneck JL, Roberts GD (1974) Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28:226-231
    • (1974) Appl Microbiol , vol.28 , pp. 226-231
    • Staneck, J.L.1    Roberts, G.D.2
  • 32
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using aaximum likelhood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using aaximum likelhood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882 (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 34
    • 0004268121 scopus 로고
    • Ronald Press, New York, A summary of current knowledge
    • Waksman SA (1967) The actinomycetes. Ronald Press, New York, A summary of current knowledge
    • (1967) The Actinomycetes
    • Waksman, S.A.1
  • 35
    • 0000069003 scopus 로고
    • Genus Streptomyces Waksman and Henrici 1943, 339AL
    • Williams ST, Sharpe ME, Holt JG (eds). Williams and Wilkins, Baltimore
    • Williams ST, Goodfellow M, Alderson G (1989) Genus Streptomyces Waksman and Henrici 1943, 339AL. In: Williams ST, Sharpe ME, Holt JG (eds) Bergey's manual of systematic bacteriology, vol 4. Williams and Wilkins, Baltimore, pp 2463-2468
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.4 , pp. 2463-2468
    • Williams, S.T.1    Goodfellow, M.2    Alderson, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.