메뉴 건너뛰기




Volumn 20, Issue 10, 2015, Pages 789-801

Role of 100S ribosomes in bacterial decay period

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN S10; PROTEIN S2; RIBOSOME PROTEIN; UNCLASSIFIED DRUG; AMINO ACID; ESCHERICHIA COLI PROTEIN; GREEN FLUORESCENT PROTEIN; PROTEIN AGGREGATE; RIBOSOMAL PROTEIN S10; RIBOSOMAL PROTEIN S2;

EID: 84943232169     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/gtc.12273     Document Type: Article
Times cited : (22)

References (37)
  • 1
  • 2
    • 0034981052 scopus 로고    scopus 로고
    • Ribosome-associated protein that inhibits translation at the aminoacyl-tRNA binding stage
    • Agafonov, D.E., Kolb, V.A. & Spirin, A.S. (2001) Ribosome-associated protein that inhibits translation at the aminoacyl-tRNA binding stage. EMBO Rep. 2, 399-402.
    • (2001) EMBO Rep. , vol.2 , pp. 399-402
    • Agafonov, D.E.1    Kolb, V.A.2    Spirin, A.S.3
  • 3
    • 14644425919 scopus 로고    scopus 로고
    • Modulation of mRNA stability participates in stationary-phase-specific expression of ribosome modulation factor
    • Aiso, T., Yoshida, H., Wada, A. & Ohki, R. (2005) Modulation of mRNA stability participates in stationary-phase-specific expression of ribosome modulation factor. J. Bacteriol. 187, 1951-1958.
    • (2005) J. Bacteriol. , vol.187 , pp. 1951-1958
    • Aiso, T.1    Yoshida, H.2    Wada, A.3    Ohki, R.4
  • 5
    • 84862765893 scopus 로고    scopus 로고
    • Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells
    • Bakshi, S., Siryaporn, A., Goulian, M. & Weisshaar, J.C. (2012) Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells. Mol. Microbiol. 85, 21-38.
    • (2012) Mol. Microbiol. , vol.85 , pp. 21-38
    • Bakshi, S.1    Siryaporn, A.2    Goulian, M.3    Weisshaar, J.C.4
  • 6
    • 78751468963 scopus 로고    scopus 로고
    • Degradation of ribosomal RNA during starvation: comparison to quality control during steady-state growth and a role for RNase PH
    • Basturea, G.N., Zundel, M.A. & Deutscher, M.P. (2011) Degradation of ribosomal RNA during starvation: comparison to quality control during steady-state growth and a role for RNase PH. RNA 17, 338-345.
    • (2011) RNA , vol.17 , pp. 338-345
    • Basturea, G.N.1    Zundel, M.A.2    Deutscher, M.P.3
  • 7
    • 0014021084 scopus 로고
    • Synthesis and breakdown of ribonucleic acid in Escherichia coli starving for nitrogen
    • Ben-Hamida, F. & Schlessinger, D. (1966) Synthesis and breakdown of ribonucleic acid in Escherichia coli starving for nitrogen. Biochim. Biophys. Acta 119, 183-191.
    • (1966) Biochim. Biophys. Acta , vol.119 , pp. 183-191
    • Ben-Hamida, F.1    Schlessinger, D.2
  • 8
    • 0000640710 scopus 로고    scopus 로고
    • Modulation of chemical composition and other parameters of the cell by growth rate
    • (eds F. C. Neidhardt, R. Curtiss III, J.L. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikoff, M. Riley, M. Schaechter & H.E. Umbarger) Washington, D.C.: ASM Press
    • Bremer, H. & Dennis, P.P. (1996) Modulation of chemical composition and other parameters of the cell by growth rate. In: Escherichia coli and Salmonella: Cellular and Molecular Biology (eds F. C. Neidhardt, R. Curtiss III, J.L. Ingraham, E.C.C. Lin, K.B. Low, B. Magasanik, W.S. Reznikoff, M. Riley, M. Schaechter & H.E. Umbarger ), pp. 1553-1569. Washington, D.C.: ASM Press.
    • (1996) Escherichia coli and Salmonella: Cellular and Molecular Biology , pp. 1553-1569
    • Bremer, H.1    Dennis, P.P.2
  • 9
    • 0029065955 scopus 로고
    • Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant
    • Cherepanov, P.P. & Wackernagel, W. (1995) Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant. Gene 158, 9-14.
    • (1995) Gene , vol.158 , pp. 9-14
    • Cherepanov, P.P.1    Wackernagel, W.2
  • 10
    • 0014674464 scopus 로고
    • Electrophoretic characterization of bacterial polyribosomes in agarose-acrylamide composite gels
    • Dahlberg, A.E., Dingman, C.W. & Peacock, A.C. (1969) Electrophoretic characterization of bacterial polyribosomes in agarose-acrylamide composite gels. J. Mol. Biol. 41, 139-147.
    • (1969) J. Mol. Biol. , vol.41 , pp. 139-147
    • Dahlberg, A.E.1    Dingman, C.W.2    Peacock, A.C.3
  • 11
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko, K.A. & Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl Acad. Sci. USA 97, 6640-6645.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 12
    • 0022610857 scopus 로고
    • Role of ribosome degradation in the death of starved Escherichia coli cells
    • Davis, B.D., Luger, S.M. & Tai, P.C. (1986) Role of ribosome degradation in the death of starved Escherichia coli cells. J. Bacteriol. 166, 439-445.
    • (1986) J. Bacteriol. , vol.166 , pp. 439-445
    • Davis, B.D.1    Luger, S.M.2    Tai, P.C.3
  • 13
    • 0033595785 scopus 로고    scopus 로고
    • A novel mutant of green fluorescent protein with enhanced sensitivity for microanalysis at 488 nm excitation
    • Ito, Y., Suzuki, M. & Husimi, Y. (1999) A novel mutant of green fluorescent protein with enhanced sensitivity for microanalysis at 488 nm excitation. Biochem. Biophys. Res. Commun. 264, 556-560.
    • (1999) Biochem. Biophys. Res. Commun. , vol.264 , pp. 556-560
    • Ito, Y.1    Suzuki, M.2    Husimi, Y.3
  • 14
    • 0034859791 scopus 로고    scopus 로고
    • Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp
    • Izutsu, K., Wada, A. & Wada, C. (2001) Expression of ribosome modulation factor (RMF) in Escherichia coli requires ppGpp. Genes Cells 6, 665-676.
    • (2001) Genes Cells , vol.6 , pp. 665-676
    • Izutsu, K.1    Wada, A.2    Wada, C.3
  • 15
    • 0024017415 scopus 로고
    • Formation of recombinant protein inclusion bodies in Escherichia coli
    • Kane, J.F. & Hartley, D.L. (1988) Formation of recombinant protein inclusion bodies in Escherichia coli. Trends Biotechnol. 6, 95-101.
    • (1988) Trends Biotechnol. , vol.6 , pp. 95-101
    • Kane, J.F.1    Hartley, D.L.2
  • 16
    • 77953556312 scopus 로고    scopus 로고
    • Structure of the 100S ribosome in the hibernation stage revealed by electron cryomicroscopy
    • Kato, T., Yoshida, H., Miyata, T., Maki, Y., Wada, A. & Namba, K. (2010) Structure of the 100S ribosome in the hibernation stage revealed by electron cryomicroscopy. Structure 18, 719-724.
    • (2010) Structure , vol.18 , pp. 719-724
    • Kato, T.1    Yoshida, H.2    Miyata, T.3    Maki, Y.4    Wada, A.5    Namba, K.6
  • 17
    • 0345657890 scopus 로고
    • Protein turnover in growing cultures of Escherichia coli
    • Koch, A.L. & Levy, H.R. (1955) Protein turnover in growing cultures of Escherichia coli. J. Biol. Chem. 217, 947-957.
    • (1955) J. Biol. Chem. , vol.217 , pp. 947-957
    • Koch, A.L.1    Levy, H.R.2
  • 18
    • 0034578389 scopus 로고    scopus 로고
    • Aggresomes, inclusion bodies and protein aggregation
    • Kopito, R.R. (2000) Aggresomes, inclusion bodies and protein aggregation. Trends Cell Biol. 10, 524-530.
    • (2000) Trends Cell Biol. , vol.10 , pp. 524-530
    • Kopito, R.R.1
  • 19
    • 38649135397 scopus 로고    scopus 로고
    • Existence of abnormal protein aggregates in healthy Escherichia coli cells
    • Maisonneuve, E., Fraysse, L., Moinier, D. & Dukan, S. (2008) Existence of abnormal protein aggregates in healthy Escherichia coli cells. J. Bacteriol. 190, 887-893.
    • (2008) J. Bacteriol. , vol.190 , pp. 887-893
    • Maisonneuve, E.1    Fraysse, L.2    Moinier, D.3    Dukan, S.4
  • 20
    • 0034489577 scopus 로고    scopus 로고
    • Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli
    • Maki, Y., Yoshida, H. & Wada, A. (2000) Two proteins, YfiA and YhbH, associated with resting ribosomes in stationary phase Escherichia coli. Genes Cells 5, 965-974.
    • (2000) Genes Cells , vol.5 , pp. 965-974
    • Maki, Y.1    Yoshida, H.2    Wada, A.3
  • 21
    • 24244466636 scopus 로고
    • The effects of magnesium starvation on the ribosome content of Escherichia coli
    • McCarthy, B.J. (1962) The effects of magnesium starvation on the ribosome content of Escherichia coli. Biochim. Biophys. Acta 55, 880-889.
    • (1962) Biochim. Biophys. Acta , vol.55 , pp. 880-889
    • McCarthy, B.J.1
  • 22
    • 0036138908 scopus 로고    scopus 로고
    • A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications
    • Nagai, T., Ibata, K., Park, E.S., Kubota, M., Mikoshiba, K. & Miyawaki, A. (2002) A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat. Biotechnol. 20, 87-90.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 87-90
    • Nagai, T.1    Ibata, K.2    Park, E.S.3    Kubota, M.4    Mikoshiba, K.5    Miyawaki, A.6
  • 23
    • 84919916788 scopus 로고    scopus 로고
    • Modern and simple construction of plasmid: saving time and cost
    • Nakayama, H. & Shimamoto, N. (2014) Modern and simple construction of plasmid: saving time and cost. J. Microbiol. 52, 891-897.
    • (2014) J. Microbiol. , vol.52 , pp. 891-897
    • Nakayama, H.1    Shimamoto, N.2
  • 24
    • 34250377470 scopus 로고    scopus 로고
    • Inclusion body myositis: current pathogenetic concepts and diagnostic and therapeutic approaches
    • Needham, M. & Mastaglia, F.L. (2007) Inclusion body myositis: current pathogenetic concepts and diagnostic and therapeutic approaches. Lancet Neurol. 6, 620-631.
    • (2007) Lancet Neurol. , vol.6 , pp. 620-631
    • Needham, M.1    Mastaglia, F.L.2
  • 26
    • 77149178707 scopus 로고    scopus 로고
    • CBB staining protocol with higher sensitivity and mass spectrometric compatibility
    • Pink, M., Verma, N., Rettenmeier, A.W. & Schmitz-Spanke, S. (2010) CBB staining protocol with higher sensitivity and mass spectrometric compatibility. Electrophoresis 31, 593-598.
    • (2010) Electrophoresis , vol.31 , pp. 593-598
    • Pink, M.1    Verma, N.2    Rettenmeier, A.W.3    Schmitz-Spanke, S.4
  • 27
    • 0035818579 scopus 로고    scopus 로고
    • Specificity in intracellular protein aggregation and inclusion body formation
    • Rajan, R.S., Illing, M.E., Bence, N.F. & Kopito, R.R. (2001) Specificity in intracellular protein aggregation and inclusion body formation. Proc. Natl Acad. Sci. USA 98, 13060-13065.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 13060-13065
    • Rajan, R.S.1    Illing, M.E.2    Bence, N.F.3    Kopito, R.R.4
  • 28
    • 11144267737 scopus 로고    scopus 로고
    • Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein
    • Shaner, N.C., Campbell, R.E., Steinbach, P.A., Giepmans, B.N.G., Palmer, A.E. & Tsien, R.Y. (2004) Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat. Biotechnol. 22, 1567-1572.
    • (2004) Nat. Biotechnol. , vol.22 , pp. 1567-1572
    • Shaner, N.C.1    Campbell, R.E.2    Steinbach, P.A.3    Giepmans, B.N.G.4    Palmer, A.E.5    Tsien, R.Y.6
  • 29
    • 0000360525 scopus 로고
    • Structure of the chromophore of Aequorea green fluorescent protein
    • Shimomura, O. (1979) Structure of the chromophore of Aequorea green fluorescent protein. FEBS Lett. 104, 220-222.
    • (1979) FEBS Lett. , vol.104 , pp. 220-222
    • Shimomura, O.1
  • 31
    • 0015837276 scopus 로고
    • Electrophoretic separation of Escherichia coli ribosomal particles on polyacrylamide gels
    • Talens, A., van Diggelen, O.P., Brongers, M., Popa, L.M. & Bosch, L. (1973) Electrophoretic separation of Escherichia coli ribosomal particles on polyacrylamide gels. Eur. J. Biochem. 37, 121-133.
    • (1973) Eur. J. Biochem. , vol.37 , pp. 121-133
    • Talens, A.1    van Diggelen, O.P.2    Brongers, M.3    Popa, L.M.4    Bosch, L.5
  • 32
    • 29244463552 scopus 로고    scopus 로고
    • Ribosome binding proteins YhbH and YfiA have opposite functions during 100S formation in the stationary phase of Escherichia coli
    • Ueta, M., Yoshida, H., Wada, C., Baba, T., Mori, H. & Wada, A. (2005) Ribosome binding proteins YhbH and YfiA have opposite functions during 100S formation in the stationary phase of Escherichia coli. Genes Cells 10, 1103-1112.
    • (2005) Genes Cells , vol.10 , pp. 1103-1112
    • Ueta, M.1    Yoshida, H.2    Wada, C.3    Baba, T.4    Mori, H.5    Wada, A.6
  • 34
    • 0025304290 scopus 로고
    • Structure and probable genetic location of a "ribosome modulation factor" associated with 100S ribosomes in stationary-phase Escherichia coli cells
    • Wada, A., Yamazaki, Y., Fujita, N. & Ishihama, A. (1990) Structure and probable genetic location of a "ribosome modulation factor" associated with 100S ribosomes in stationary-phase Escherichia coli cells. Proc. Natl Acad. Sci. USA 87, 2657-2661.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 2657-2661
    • Wada, A.1    Yamazaki, Y.2    Fujita, N.3    Ishihama, A.4
  • 35
    • 0036947369 scopus 로고    scopus 로고
    • The ribosome modulation factor (RMF) binding site on the 100S ribosome of Escherichia coli
    • Yoshida, H., Maki, Y., Kato, H., Fujisawa, H., Izutsu, K., Wada, C. & Wada, A. (2002) The ribosome modulation factor (RMF) binding site on the 100S ribosome of Escherichia coli. J. Biochem. 132, 983-989.
    • (2002) J. Biochem. , vol.132 , pp. 983-989
    • Yoshida, H.1    Maki, Y.2    Kato, H.3    Fujisawa, H.4    Izutsu, K.5    Wada, C.6    Wada, A.7
  • 36
    • 84906253520 scopus 로고    scopus 로고
    • The 100S ribosome: ribosomal hibernation induced by stress
    • Yoshida, H. & Wada, A. (2014) The 100S ribosome: ribosomal hibernation induced by stress. Wiley Interdiscip. Rev. RNA 5, 723-732.
    • (2014) Wiley Interdiscip. Rev. RNA , vol.5 , pp. 723-732
    • Yoshida, H.1    Wada, A.2
  • 37
    • 65249190330 scopus 로고    scopus 로고
    • Initiation of ribosome degradation during starvation in Escherichia coli
    • Zundel, M.A., Basturea, G.N. & Deutscher, M.P. (2009) Initiation of ribosome degradation during starvation in Escherichia coli. RNA 15, 977-983.
    • (2009) RNA , vol.15 , pp. 977-983
    • Zundel, M.A.1    Basturea, G.N.2    Deutscher, M.P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.