메뉴 건너뛰기




Volumn 20, Issue 9, 2015, Pages

Fast retinal layer segmentation of spectral domain optical coherence tomography images

Author keywords

active contour; curve smoothing; fast algorithm; Kalman filtering; macular layer boundary; segmentation; spectral domain optical coherence tomography

Indexed keywords

CURVE FITTING; IMAGE SEGMENTATION; KALMAN FILTERS; OPHTHALMOLOGY; OPTICAL TOMOGRAPHY; STRAIN MEASUREMENT; TOMOGRAPHY;

EID: 84942694159     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.JBO.20.9.096014     Document Type: Article
Times cited : (10)

References (51)
  • 1
    • 0026254046 scopus 로고
    • Optical coherence tomography
    • D. Huang et al., "Optical coherence tomography," Science 254(5035), 1178-1181 (1991).
    • (1991) Science , vol.254 , Issue.5035 , pp. 1178-1181
    • Huang, D.1
  • 2
    • 61549087421 scopus 로고    scopus 로고
    • Optical coherence tomography (OCT) in ophthalmology: Introduction
    • J. G. Fujimoto et al., "Optical coherence tomography (OCT) in ophthalmology: introduction," Opt. Express 17(5), 3978-3979 (2009).
    • (2009) Opt. Express , vol.17 , Issue.5 , pp. 3978-3979
    • Fujimoto, J.G.1
  • 3
    • 20444487701 scopus 로고    scopus 로고
    • Quantitative thickness measurement of retinal layers imaged by optical coherence tomography
    • M. Shahidi, Z. Wang, and R. Zelkha "Quantitative thickness measurement of retinal layers imaged by optical coherence tomography," Am. J. Ophthalmol. 139(6), 1056-1061 (2005).
    • (2005) Am. J. Ophthalmol. , vol.139 , Issue.6 , pp. 1056-1061
    • Shahidi, M.1    Wang, Z.2    Zelkha, R.3
  • 4
    • 22144478712 scopus 로고    scopus 로고
    • Macular segmentation with optical coherence tomography
    • H. Ishikawa et al., "Macular segmentation with optical coherence tomography," Invest. Ophthalmol. Vis. Sci. 46(6), 2012-2017 (2005).
    • (2005) Invest. Ophthalmol. Vis. Sci. , vol.46 , Issue.6 , pp. 2012-2017
    • Ishikawa, H.1
  • 5
    • 28944453878 scopus 로고    scopus 로고
    • Automated detection of retinal layer structures on optical coherence tomography images
    • D. Cabrera Fernández, H. M. Salinas, and C. A. Puliafito, "Automated detection of retinal layer structures on optical coherence tomography images," Opt. Express 13(25), 10200-10216 (2005).
    • (2005) Opt. Express , vol.13 , Issue.25 , pp. 10200-10216
    • Cabrera Fernández, D.1    Salinas, H.M.2    Puliafito, C.A.3
  • 6
    • 35948932238 scopus 로고    scopus 로고
    • Analysis of posterior retinal layers in spectral optical coherence tomography images of the normal retinal and retinal pathologies
    • M. Szkulmowski et al., "Analysis of posterior retinal layers in spectral optical coherence tomography images of the normal retinal and retinal pathologies," J. Biomed. Opt. 12(4), 041207 (2007).
    • (2007) J. Biomed. Opt. , vol.12 , Issue.4 , pp. 041207
    • Szkulmowski, M.1
  • 7
    • 44349134375 scopus 로고    scopus 로고
    • Mapping of macular substructures with optical coherence tomography for glaucoma diagnosis
    • O Tan et al., "Mapping of macular substructures with optical coherence tomography for glaucoma diagnosis," Ophthalmology 115(6), 949-956 (2008).
    • (2008) Ophthalmology , vol.115 , Issue.6 , pp. 949-956
    • Tan, O.1
  • 8
    • 54449084982 scopus 로고    scopus 로고
    • Thickness profiles of retinal layers by optical coherence tomography image segmentation
    • M. Bagci et al., "Thickness profiles of retinal layers by optical coherence tomography image segmentation," Am. J. Ophthalmol. 146(5), 679-687 (2008).
    • (2008) Am. J. Ophthalmol. , vol.146 , Issue.5 , pp. 679-687
    • Bagci, M.1
  • 9
    • 38949189334 scopus 로고    scopus 로고
    • Automatic segmentation in three-dimensional analysis of fibrovascular pigmentepithelial detachment using high-definition optical coherence tomography
    • C Ahlers et al., "Automatic segmentation in three-dimensional analysis of fibrovascular pigmentepithelial detachment using high-definition optical coherence tomography," Br. J. Ophthalmol. 92, 197-203 (2008).
    • (2008) Br. J. Ophthalmol. , vol.92 , pp. 197-203
    • Ahlers, C.1
  • 10
    • 69949102912 scopus 로고    scopus 로고
    • Automated segmentation of the macula by optical coherence tomography
    • T. Fabritius et al., "Automated segmentation of the macula by optical coherence tomography," Opt. Express 17(18), 15659-15669 (2009).
    • (2009) Opt. Express , vol.17 , Issue.18 , pp. 15659-15669
    • Fabritius, T.1
  • 11
    • 0035437720 scopus 로고    scopus 로고
    • Retinal thickness measurements from optical coherence tomography using a Markov boundary model
    • D. Koozekanani, K. L. Boyer, and C. Roberts, "Retinal thickness measurements from optical coherence tomography using a Markov boundary model," IEEE T. Med. Imaging 20(9), 900-916 (2001).
    • (2001) IEEE T. Med. Imaging , vol.20 , Issue.9 , pp. 900-916
    • Koozekanani, D.1    Boyer, K.L.2    Roberts, C.3
  • 12
    • 33646426631 scopus 로고    scopus 로고
    • Automatic recovery of the optic nervehead geometry in optical coherence tomography
    • K. L. Boyer, A. Herzog, and C. Roberts, "Automatic recovery of the optic nervehead geometry in optical coherence tomography," IEEE T. Med. Imaging 25(5), 553-570 (2006).
    • (2006) IEEE T. Med. Imaging , vol.25 , Issue.5 , pp. 553-570
    • Boyer, K.L.1    Herzog, A.2    Roberts, C.3
  • 13
    • 45549090024 scopus 로고    scopus 로고
    • Characterization of outer retinal morphology with high-speed, ultrahigh-resolution optical coherence tomography
    • V. J. Srinivasan et al., "Characterization of outer retinal morphology with high-speed, ultrahigh-resolution optical coherence tomography," Invest. Ophthalmol. Vis. Sci. 49(4), 1571-1579 (2008).
    • (2008) Invest. Ophthalmol. Vis. Sci. , vol.49 , Issue.4 , pp. 1571-1579
    • Srinivasan, V.J.1
  • 14
    • 27744580130 scopus 로고    scopus 로고
    • Retinal nerve fiber layer thickness map determined from optical coherence tomography images
    • M. Mujat et al., "Retinal nerve fiber layer thickness map determined from optical coherence tomography images," Opt. Express 13(23), 9480-9491 (2005).
    • (2005) Opt. Express , vol.13 , Issue.23 , pp. 9480-9491
    • Mujat, M.1
  • 15
    • 23844531558 scopus 로고    scopus 로고
    • Delineating fluid-Filled region boundaries in optical coherence tomography images of the retina
    • D. C. Fernández, "Delineating fluid-Filled region boundaries in optical coherence tomography images of the retina," IEEE Trans. Med. Imaging 24(8), 929-945 (2005).
    • (2005) IEEE Trans. Med. Imaging , vol.24 , Issue.8 , pp. 929-945
    • Fernández, D.C.1
  • 16
    • 73949138910 scopus 로고    scopus 로고
    • Intra-retinal layer segmentation in optical coherence tomography images
    • A. Mishra et al., "Intra-retinal layer segmentation in optical coherence tomography images," Opt. Express 17(26), 23719-23728 (2009).
    • (2009) Opt. Express , vol.17 , Issue.26 , pp. 23719-23728
    • Mishra, A.1
  • 17
    • 79551600760 scopus 로고    scopus 로고
    • Segmentation of intra-retinal layers from optical coherence tomography images using an active contour approach
    • A. Yazdanpanah et al., "Segmentation of intra-retinal layers from optical coherence tomography images using an active contour approach," IEEE Trans. Med. Imaging 30(2), 484-496 (2011).
    • (2011) IEEE Trans. Med. Imaging , vol.30 , Issue.2 , pp. 484-496
    • Yazdanpanah, A.1
  • 18
    • 79960898014 scopus 로고    scopus 로고
    • Retinal nerve fiber layer segmentation on FD-OCT scans of normal subjects and glaucoma patients
    • M. A. Mayer et al., "Retinal nerve fiber layer segmentation on FD-OCT scans of normal subjects and glaucoma patients," Biomed. Opt. Express 1(5), 1358-1383 (2010).
    • (2010) Biomed. Opt. Express , vol.1 , Issue.5 , pp. 1358-1383
    • Mayer, M.A.1
  • 19
    • 52649174394 scopus 로고    scopus 로고
    • Intraretinal layer segmentation of macular optical coherence tomography images using optimal 3-D graph search
    • M. K. Garvin et al., "Intraretinal layer segmentation of macular optical coherence tomography images using optimal 3-D graph search," IEEE Trans. Med. Imaging 27(10), 1495-1505 (2008).
    • (2008) IEEE Trans. Med. Imaging , vol.27 , Issue.10 , pp. 1495-1505
    • Garvin, M.K.1
  • 20
    • 73849122331 scopus 로고    scopus 로고
    • Automated 3D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images
    • M. K. Garvin et al., "Automated 3D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images," IEEE Trans. Med. Imaging 28(9), 1436-1447 (2009).
    • (2009) IEEE Trans. Med. Imaging , vol.28 , Issue.9 , pp. 1436-1447
    • Garvin, M.K.1
  • 21
    • 73849127070 scopus 로고    scopus 로고
    • Segmentation of the optic disc in 3-D OCT scans of the optic nerve head
    • K. Lee et al., "Segmentation of the optic disc in 3-D OCT scans of the optic nerve head," IEEE Trans. Med. Imaging 29(1), 159-168 (2010).
    • (2010) IEEE Trans. Med. Imaging , vol.29 , Issue.1 , pp. 159-168
    • Lee, K.1
  • 22
    • 77953142151 scopus 로고    scopus 로고
    • Three-dimensional analysis of retinal layer texture: Identification of fluid-filled regions in SD-OCT of the macula
    • G. Quellec et al., "Three-dimensional analysis of retinal layer texture: identification of fluid-filled regions in SD-OCT of the macula," IEEE Trans. Med. Imaging 29(6), 1321-1330 (2010).
    • (2010) IEEE Trans. Med. Imaging , vol.29 , Issue.6 , pp. 1321-1330
    • Quellec, G.1
  • 23
    • 77956360101 scopus 로고    scopus 로고
    • Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation
    • S. J. Chiu et al., "Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation," Opt. Express, 18(18), 19413-19428 (2010).
    • (2010) Opt. Express , vol.18 , Issue.18 , pp. 19413-19428
    • Chiu, S.J.1
  • 24
    • 77957986703 scopus 로고    scopus 로고
    • Automated layer segmentation of macular OCT images using dual-scale gradient information
    • Q. Yang et al., "Automated layer segmentation of macular OCT images using dual-scale gradient information," Opt. Express 18(20), 21293-21307 (2010).
    • (2010) Opt. Express , vol.18 , Issue.20 , pp. 21293-21307
    • Yang, Q.1
  • 25
    • 84861159304 scopus 로고    scopus 로고
    • Automated segmentation of outer retinal layers in macular OCT images of patients with retinitis pigmentosa
    • Q. Yang et al., "Automated segmentation of outer retinal layers in macular OCT images of patients with retinitis pigmentosa," Biomed. Opt. Express 2(9), 2493-2503 (2011).
    • (2011) Biomed. Opt. Express , vol.2 , Issue.9 , pp. 2493-2503
    • Yang, Q.1
  • 26
    • 84857959029 scopus 로고    scopus 로고
    • Validated automatic segmentation of AMD pathology including drusen and geographic atrophy in SD-OCT images
    • S. J. Chiu et al., "Validated automatic segmentation of AMD pathology including drusen and geographic atrophy in SD-OCT images," Invest. Ophthalmol. Vis. Sci. 53(1), 53-61 (2012).
    • (2012) Invest. Ophthalmol. Vis. Sci. , vol.53 , Issue.1 , pp. 53-61
    • Chiu, S.J.1
  • 27
    • 84864616479 scopus 로고    scopus 로고
    • 3D segmentation of fluid-associated abnormalities in retinal OCT: Probability constrained graph-search-graph-cut
    • X. Chen et al., "3D segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut," IEEE Trans. Med. Imaging 31(8), 1521-1531 (2012).
    • (2012) IEEE Trans. Med. Imaging , vol.31 , Issue.8 , pp. 1521-1531
    • Chen, X.1
  • 28
    • 84893591763 scopus 로고    scopus 로고
    • Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology
    • P. P. Srinivasan et al., "Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology," Biomed. Opt. Express 5(2), 348-365 (2014).
    • (2014) Biomed. Opt. Express , vol.5 , Issue.2 , pp. 348-365
    • Srinivasan, P.P.1
  • 29
    • 84874884418 scopus 로고    scopus 로고
    • Graph-based multi-surface segmentation of OCT data using trained hard and soft constraints
    • P. A. Dufour et al., "Graph-based multi-surface segmentation of OCT data using trained hard and soft constraints," IEEE Trans. Med. Imaging 32(3), 531-543 (2012).
    • (2012) IEEE Trans. Med. Imaging , vol.32 , Issue.3 , pp. 531-543
    • Dufour, P.A.1
  • 30
    • 80051664783 scopus 로고    scopus 로고
    • Automated segmentation by pixel classification of retinal layers in ophthalmic OCT images
    • K. A. Vermeer et al., "Automated segmentation by pixel classification of retinal layers in ophthalmic OCT images," Biomed. Opt. Express 2(6), 1743-1756 (2011).
    • (2011) Biomed. Opt. Express , vol.2 , Issue.6 , pp. 1743-1756
    • Vermeer, K.A.1
  • 31
    • 84879267573 scopus 로고    scopus 로고
    • Retinal layer segmentation of macular OCT images using boundary classification
    • A. Lang et al., "Retinal layer segmentation of macular OCT images using boundary classification," Biomed. Opt. Express 4(7), 1133-1152 (2013).
    • (2013) Biomed. Opt. Express , vol.4 , Issue.7 , pp. 1133-1152
    • Lang, A.1
  • 32
    • 85017329313 scopus 로고    scopus 로고
    • Automated classifiers for early detection and diagnosis of retinopathy in diabetic eyes
    • G. M. Somfai et al., "Automated classifiers for early detection and diagnosis of retinopathy in diabetic eyes," BMC Bioinf. 15(106), 1-10 (2014)..
    • (2014) BMC Bioinf. , vol.15 , Issue.106 , pp. 1-10
    • Somfai, G.M.1
  • 33
    • 0037248250 scopus 로고    scopus 로고
    • Macular thickness changes in glaucomatous optic neuropathy detected using optical coherence tomography
    • D. S. Greenfield, H. Bagga, and R. W. Knighton, "Macular thickness changes in glaucomatous optic neuropathy detected using optical coherence tomography," Arch. Ophthalmol. 121, 41-46 (2003).
    • (2003) Arch. Ophthalmol. , vol.121 , pp. 41-46
    • Greenfield, D.S.1    Bagga, H.2    Knighton, R.W.3
  • 34
    • 0037228869 scopus 로고    scopus 로고
    • Optical coherence tomography measurement of macular and nerve fiber layer thickness in normal and glaucomatous human eyes
    • V. Guedes et al., "Optical coherence tomography measurement of macular and nerve fiber layer thickness in normal and glaucomatous human eyes," Ophthalmology 110, 177-189 (2003).
    • (2003) Ophthalmology , vol.110 , pp. 177-189
    • Guedes, V.1
  • 36
    • 67649977021 scopus 로고    scopus 로고
    • Selective loss of inner retinal layer thickness in type 1 diabetic patients with minimal diabetic retinopathy
    • H. W. van Dijk et al., "Selective loss of inner retinal layer thickness in type 1 diabetic patients with minimal diabetic retinopathy," Invest. Ophthalmol. Visual Sci. 50, 3404-3409 (2009).
    • (2009) Invest. Ophthalmol. Visual Sci. , vol.50 , pp. 3404-3409
    • Van Dijk, H.W.1
  • 37
    • 57249107934 scopus 로고    scopus 로고
    • Optical coherence tomography: A window into the mechanisms of multiple sclerosis
    • E. M. Frohman et al., "Optical coherence tomography: a window into the mechanisms of multiple sclerosis," Nat. Clin. Pract. Neurol. 4, 664-675 (2008).
    • (2008) Nat. Clin. Pract. Neurol. , vol.4 , pp. 664-675
    • Frohman, E.M.1
  • 38
    • 79551705618 scopus 로고    scopus 로고
    • Primary retinal pathology in multiple sclerosis as detected by optical coherence tomography
    • S. Saidha et al., "Primary retinal pathology in multiple sclerosis as detected by optical coherence tomography," Brain 134, 518-533 (2011).
    • (2011) Brain , vol.134 , pp. 518-533
    • Saidha, S.1
  • 39
    • 84867646435 scopus 로고    scopus 로고
    • Microcystic macular oedema, thickness of the inner nuclear layer of the retina, and disease characteristics in multiple sclerosis: A retrospective study
    • S. Saidha et al., "Microcystic macular oedema, thickness of the inner nuclear layer of the retina, and disease characteristics in multiple sclerosis: a retrospective study," Lancet Neurol. 11, 963-972 (2012).
    • (2012) Lancet Neurol. , vol.11 , pp. 963-972
    • Saidha, S.1
  • 40
    • 84874107781 scopus 로고    scopus 로고
    • Retinal nerve fiber layer thickness in patients with Alzheimer disease
    • S. Kirbas et al., "Retinal nerve fiber layer thickness in patients with Alzheimer disease," J. Neuroophthalmol. 33, 58-61 (2013).
    • (2013) J. Neuroophthalmol. , vol.33 , pp. 58-61
    • Kirbas, S.1
  • 41
    • 66949160384 scopus 로고    scopus 로고
    • Inner retinal layer thinning in Parkinson disease
    • M. E. Hajee et al., "Inner retinal layer thinning in Parkinson disease," Arch. Ophthalmol. 127, 737-741 (2009).
    • (2009) Arch. Ophthalmol. , vol.127 , pp. 737-741
    • Hajee, M.E.1
  • 42
    • 85024429815 scopus 로고
    • A new approach to linear filtering and prediction theory
    • R. E. Kalman, "A new approach to linear filtering and prediction theory," J. Basic. Eng. 82D, 35-45 (1960).
    • (1960) J. Basic. Eng. , vol.82 D , pp. 35-45
    • Kalman, R.E.1
  • 43
    • 4344607611 scopus 로고    scopus 로고
    • Efficient energies and algorithms for parametric snakes
    • M. Jacob, T. Blu, and M. Unser, "Efficient energies and algorithms for parametric snakes," IEEE Trans. Image Process. 13(9), 1231-1244 (2004).
    • (2004) IEEE Trans. Image Process. , vol.13 , Issue.9 , pp. 1231-1244
    • Jacob, M.1    Blu, T.2    Unser, M.3
  • 44
    • 0042553279 scopus 로고
    • Smoothing and differentiation of data by simplified least square procedures
    • A Savitzky and M. J. E. Golay, "Smoothing and differentiation of data by simplified least square procedures," Anal. Chem. 36(8), 1627-1639 (1964).
    • (1964) Anal. Chem. , vol.36 , Issue.8 , pp. 1627-1639
    • Savitzky, A.1    Golay, M.J.E.2
  • 46
    • 0026741340 scopus 로고
    • A fast algorithm for active contours and curvature estimation
    • D. A Williams and M. Shah, "A fast algorithm for active contours and curvature estimation," CVGIP Image Understand. 55(1), 14-16 (1992).
    • (1992) CVGIP Image Understand. , vol.55 , Issue.1 , pp. 14-16
    • Williams, D.A.1    Shah, M.2
  • 47
    • 0028766231 scopus 로고
    • Fast greedy algorithm for active contours
    • K. M. Lam and H. Yan, "Fast greedy algorithm for active contours," Electron. Lett. 30(1), 21-23 (1994).
    • (1994) Electron. Lett. , vol.30 , Issue.1 , pp. 21-23
    • Lam, K.M.1    Yan, H.2
  • 48
    • 11944254534 scopus 로고
    • General least-squares smoothing and differentiation by the convolution
    • P. A. Gorry, "General least-squares smoothing and differentiation by the convolution," Anal. Chem. 62(6), 570-573 (1990).
    • (1990) Anal. Chem. , vol.62 , Issue.6 , pp. 570-573
    • Gorry, P.A.1
  • 49
    • 84860511567 scopus 로고    scopus 로고
    • Age-related macular degeneration
    • L. S. Lim et al., "Age-related macular degeneration," Lancet 379(9827), 1728-1738 (2012).
    • (2012) Lancet , vol.379 , Issue.9827 , pp. 1728-1738
    • Lim, L.S.1
  • 50
    • 54249108911 scopus 로고    scopus 로고
    • Retinal pigment epithelium segmentation by polarization sensitive optical coherence tomography
    • E. Götzinger et al., "Retinal pigment epithelium segmentation by polarization sensitive optical coherence tomography," Opt. Express 16(21), 16410-16422 (2008).
    • (2008) Opt. Express , vol.16 , Issue.21 , pp. 16410-16422
    • Götzinger, E.1
  • 51
    • 84942617306 scopus 로고    scopus 로고
    • Kernel regression based segmentation of optical coherence tomography images with diabetic macular edema
    • S. J. Chiu et al., "Kernel regression based segmentation of optical coherence tomography images with diabetic macular edema," Biomed. Opt. Express 6(4), 1172-1194 (2015).
    • (2015) Biomed. Opt. Express , vol.6 , Issue.4 , pp. 1172-1194
    • Chiu, S.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.