메뉴 건너뛰기




Volumn 30, Issue 3, 2015, Pages 284-287

Changes in the swine gut microbiota in response to porcine epidemic diarrhea infection

Author keywords

16S rRNA gene; Large intestine; Microbiota; Next generation sequencing; Porcine epidemic diarrhea

Indexed keywords

ANIMAL; BACTERIUM; CLASSIFICATION; CORONAVIRUS INFECTION; FEMALE; GASTROINTESTINAL TRACT; GENETICS; INTESTINE FLORA; ISOLATION AND PURIFICATION; MALE; MICROBIOLOGY; PHYSIOLOGY; PIG; PORCINE EPIDEMIC DIARRHEA VIRUS; SWINE DISEASE; VETERINARY; VIROLOGY;

EID: 84942607392     PISSN: 13426311     EISSN: 13474405     Source Type: Journal    
DOI: 10.1264/jsme2.ME15046     Document Type: Article
Times cited : (56)

References (31)
  • 1
    • 84878448451 scopus 로고    scopus 로고
    • Incidence, risk factors, and outcomes of Fusobacterium species bacteremia
    • Afra, K., K. Laupland, J. Leal, T. Lloyd, and D. Gregson. 2013. Incidence, risk factors, and outcomes of Fusobacterium species bacteremia. BMC Infect. Dis. 13:264
    • (2013) BMC Infect. Dis , vol.13 , pp. 264
    • Afra, K.1    Laupland, K.2    Leal, J.3    Lloyd, T.4    Gregson, D.5
  • 2
    • 0027501515 scopus 로고
    • Fusobacteria: New taxonomy and related diseases
    • Bennett, K.W., and A. Eley. 1993. Fusobacteria: new taxonomy and related diseases. J. Med. Microbiol. 39:246–254
    • (1993) J. Med. Microbiol , vol.39 , pp. 246-254
    • Bennett, K.W.1    Eley, A.2
  • 3
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso, J.G., J. Kuczynski, J. Stombaugh, et al. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods. 7:335–336
    • (2010) Nat. Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1    Kuczynski, J.2    Stombaugh, J.3
  • 4
    • 41049117215 scopus 로고    scopus 로고
    • Molecular characterization and phylogenetic analysis of membrane protein genes of porcine epidemic diarrhea virus isolates in China
    • Chen, J.F., D.B. Sun, C.B. Wang, H.Y. Shi, X.C. Cui, S.W. Liu, H.J. Qiu, and L. Feng. 2008. Molecular characterization and phylogenetic analysis of membrane protein genes of porcine epidemic diarrhea virus isolates in China. Virus Genes. 36:355–364
    • (2008) Virus Genes , vol.36 , pp. 355-364
    • Chen, J.F.1    Sun, D.B.2    Wang, C.B.3    Shi, H.Y.4    Cui, X.C.5    Liu, S.W.6    Qiu, H.J.7    Feng, L.8
  • 9
    • 84921643461 scopus 로고    scopus 로고
    • High-throughput 16S rRNA gene sequencing reveals alterations of mouse intestinal microbiota after radiotherapy
    • Kim, Y.S., J. Kim, and S.-J. Park. 2015. High-throughput 16S rRNA gene sequencing reveals alterations of mouse intestinal microbiota after radiotherapy. Anaerobe. 33:1–7
    • (2015) Anaerobe , vol.33 , pp. 1-7
    • Kim, Y.S.1    Kim, J.2    Park, S.-J.3
  • 10
  • 11
    • 84902798201 scopus 로고    scopus 로고
    • Outbreak-related porcine epidemic diarrhea virus strains similar to US strains, South Korea, 2013
    • Lee, S., and C. Lee. 2014. Outbreak-related porcine epidemic diarrhea virus strains similar to US strains, South Korea, 2013. Emerg. Infect. Dis. 20:1223–1226
    • (2014) Emerg. Infect. Dis , vol.20 , pp. 1223-1226
    • Lee, S.1    Lee, C.2
  • 12
  • 13
    • 0033868844 scopus 로고    scopus 로고
    • Changes in bacterial community structure in the colon of pigs fed different experimental diets and after infection with Brachyspira hyodysenteriae
    • Leser, T.D., R.H. Lindecrona, T.K. Jensen, B.B. Jensen, and K. Møller. 2000. Changes in bacterial community structure in the colon of pigs fed different experimental diets and after infection with Brachyspira hyodysenteriae. Appl. Environ. Microbiol. 66:3290–3296
    • (2000) Appl. Environ. Microbiol , vol.66 , pp. 3290-3296
    • Leser, T.D.1    Lindecrona, R.H.2    Jensen, T.K.3    Jensen, B.B.4    Møller, K.5
  • 15
    • 84855717953 scopus 로고    scopus 로고
    • Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth
    • Lopez-Siles, M., T.M. Khan, S.H. Duncan, H.J. Harmsen, L.J. Garcia-Gil, and H.J. Flint. 2012. Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth. Appl. Environ. Microbiol. 78:420–428
    • (2012) Appl. Environ. Microbiol , vol.78 , pp. 420-428
    • Lopez-Siles, M.1    Khan, T.M.2    Duncan, S.H.3    Harmsen, H.J.4    Garcia-Gil, L.J.5    Flint, H.J.6
  • 16
    • 33646241058 scopus 로고    scopus 로고
    • Prevalence of Bacteroides and Prevotella spp. In ulcerative colitis
    • Lucke, K., S. Miehlke, E. Jacobs, and M. Schuppler. 2006. Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis. J. Med. Microbiol. 55:617–624
    • (2006) J. Med. Microbiol , vol.55 , pp. 617-624
    • Lucke, K.1    Miehlke, S.2    Jacobs, E.3    Schuppler, M.4
  • 17
    • 0005625632 scopus 로고
    • Letter to the editor
    • Oldham, J. 1972. Letter to the editor. Pig Farming. October Suppl.: 72–73
    • (1972) Pig Farming , pp. 72-73
    • Oldham, J.1
  • 18
    • 84903438950 scopus 로고    scopus 로고
    • Characterization of the fecal microbiome in different swine groups by high-throughput sequencing
    • Park, S.-J., J. Kim, J.-S. Lee, S.-K. Rhee, and H. Kim. 2014. Characterization of the fecal microbiome in different swine groups by high-throughput sequencing. Anaerobe. 28:157–162
    • (2014) Anaerobe , vol.28 , pp. 157-162
    • Park, S.-J.1    Kim, J.2    Lee, J.-S.3    Rhee, S.-K.4    Kim, H.5
  • 19
    • 0035995804 scopus 로고    scopus 로고
    • Diagnostic notes update on porcine epidemic diarrhea
    • Pospischil, A., A. Stuedli, and M. Kiupel. 2002. Diagnostic notes update on porcine epidemic diarrhea. J. Swine Health Prod. 10:81–85
    • (2002) J. Swine Health Prod , vol.10 , pp. 81-85
    • Pospischil, A.1    Stuedli, A.2    Kiupel, M.3
  • 20
    • 67650692498 scopus 로고    scopus 로고
    • Chinese-like strain of porcine epidemic diarrhea virus, Thailand
    • Puranaveja, S., P. Poolperm, P. Lertwatcharasarakul, et al. 2009. Chinese-like strain of porcine epidemic diarrhea virus, Thailand. Emerg. Infect. Dis. 15:1112–1115
    • (2009) Emerg. Infect. Dis , vol.15 , pp. 1112-1115
    • Puranaveja, S.1    Poolperm, P.2    Lertwatcharasarakul, P.3
  • 21
    • 84896496393 scopus 로고    scopus 로고
    • Coronaviruses
    • J.J. Zimmerman, L.A. Karriker, A. Ramirez, K.J. Schwartz, and G.W. Stevenson (ed.), 10th ed. Wiley-Blackwell, Ames, IA
    • Saif, L.J., M.B. Pensaert, K. Sestack, S.G. Yeo, and K. Jung. 2012. Coronaviruses, p. 501–524. In J.J. Zimmerman, L.A. Karriker, A. Ramirez, K.J. Schwartz, and G.W. Stevenson (ed.), Diseases of Swine, 10th ed. Wiley-Blackwell, Ames, IA.
    • (2012) Diseases of Swine , pp. 501-524
    • Saif, L.J.1    Pensaert, M.B.2    Sestack, K.3    Yeo, S.G.4    Jung, K.5
  • 22
    • 84887323708 scopus 로고    scopus 로고
    • Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
    • Scher, J.U., A. Sczesnak, R.S. Longman, et al. 2013. Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis. eLife. 2:e01202
    • (2013) Elife , vol.2
    • Scher, J.U.1    Sczesnak, A.2    Longman, R.S.3
  • 23
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss, P.D., S.L. Westcott, T. Ryabin, et al. 2009. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75:7537–7541
    • (2009) Appl. Environ. Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3
  • 24
    • 84862610682 scopus 로고    scopus 로고
    • Porcine epidemic diarrhoea virus: A comprehensive review of molecular epidemiology, diagnosis, and vaccines
    • Song, D., and B. Park. 2012. Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines. Virus Genes. 44:167–175
    • (2012) Virus Genes , vol.44 , pp. 167-175
    • Song, D.1    Park, B.2
  • 25
    • 84884153028 scopus 로고    scopus 로고
    • Emergence of Porcine epidemic diarrhea virus in the United States: Clinical signs, lesions, and viral genomic sequences
    • Stevenson, G.W., H. Hoang, K.J. Schwartz, et al. 2013. Emergence of Porcine epidemic diarrhea virus in the United States: clinical signs, lesions, and viral genomic sequences. J. Vet. Diagn. Invest. 25:649–654
    • (2013) J. Vet. Diagn. Invest , vol.25 , pp. 649-654
    • Stevenson, G.W.1    Hoang, H.2    Schwartz, K.J.3
  • 26
    • 79953296653 scopus 로고    scopus 로고
    • Effect of dietary administration of Psychrobacter sp. On the growth, feed utilization, digestive enzymes and immune responses of grouper Epinephelus coioides
    • Sun, Y.Z., H.L. Yang, R.L. Ma, C.X. Zhang, and W.Y. Lin. 2011. Effect of dietary administration of Psychrobacter sp. on the growth, feed utilization, digestive enzymes and immune responses of grouper Epinephelus coioides. Aquacult. Nutr. 17:e733–e740
    • (2011) Aquacult. Nutr , vol.17
    • Sun, Y.Z.1    Yang, H.L.2    Ma, R.L.3    Zhang, C.X.4    Lin, W.Y.5
  • 27
    • 0020986832 scopus 로고
    • An outbreak of swine diarrhea of a new-type associated with coronavirus-like particles in Japan. Jpn
    • Takahashi, K., K. Okada, and K. Ohshima. 1983. An outbreak of swine diarrhea of a new-type associated with coronavirus-like particles in Japan. Jpn. J. Vet. Sci. 45:829–832
    • (1983) J. Vet. Sci , vol.45 , pp. 829-832
    • Takahashi, K.1    Okada, K.2    Ohshima, K.3
  • 29
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • Turnbaugh, P.J., R.E. Ley, M.A. Mahowald, V. Magrini, E.R. Mardis, and J.I. Gordon. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027–1031
    • (2006) Nature , vol.444 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 30
    • 84864276595 scopus 로고    scopus 로고
    • Probiotic Psychrobacter sp. Improved the autochthonous microbial diversity along the gastrointestinal tract of grouper Epinephelus coioides
    • Yang, H.L., Y.Z. Sun, R.L. Ma, J.S. Li, and K.P. Huang. 2011. Probiotic Psychrobacter sp. improved the autochthonous microbial diversity along the gastrointestinal tract of grouper Epinephelus coioides. J. Aquac. Res. Development S1:001
    • (2011) J. Aquac. Res. Development , vol.S1 , pp. 001
    • Yang, H.L.1    Sun, Y.Z.2    Ma, R.L.3    Li, J.S.4    Huang, K.P.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.