-
1
-
-
84878448451
-
Incidence, risk factors, and outcomes of Fusobacterium species bacteremia
-
Afra, K., K. Laupland, J. Leal, T. Lloyd, and D. Gregson. 2013. Incidence, risk factors, and outcomes of Fusobacterium species bacteremia. BMC Infect. Dis. 13:264
-
(2013)
BMC Infect. Dis
, vol.13
, pp. 264
-
-
Afra, K.1
Laupland, K.2
Leal, J.3
Lloyd, T.4
Gregson, D.5
-
2
-
-
0027501515
-
Fusobacteria: New taxonomy and related diseases
-
Bennett, K.W., and A. Eley. 1993. Fusobacteria: new taxonomy and related diseases. J. Med. Microbiol. 39:246–254
-
(1993)
J. Med. Microbiol
, vol.39
, pp. 246-254
-
-
Bennett, K.W.1
Eley, A.2
-
3
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J.G., J. Kuczynski, J. Stombaugh, et al. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods. 7:335–336
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
-
4
-
-
41049117215
-
Molecular characterization and phylogenetic analysis of membrane protein genes of porcine epidemic diarrhea virus isolates in China
-
Chen, J.F., D.B. Sun, C.B. Wang, H.Y. Shi, X.C. Cui, S.W. Liu, H.J. Qiu, and L. Feng. 2008. Molecular characterization and phylogenetic analysis of membrane protein genes of porcine epidemic diarrhea virus isolates in China. Virus Genes. 36:355–364
-
(2008)
Virus Genes
, vol.36
, pp. 355-364
-
-
Chen, J.F.1
Sun, D.B.2
Wang, C.B.3
Shi, H.Y.4
Cui, X.C.5
Liu, S.W.6
Qiu, H.J.7
Feng, L.8
-
5
-
-
33846072878
-
The ribosomal database project (RDP-II): Introducing myRDP space and quality controlled public data
-
Cole, J.R., B. Chai, R.J. Farris, Q. Wang, A.S. Kulam-Syed-Mohideen, D.M. McGarrell, A.M. Bandela, E. Cardenas, G.M. Garrity, and J.M. Tiedje. 2007. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res. 35:D169–D172
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam-Syed-Mohideen, A.S.5
McGarrell, D.M.6
Bandela, A.M.7
Cardenas, E.8
Garrity, G.M.9
Tiedje, J.M.10
-
6
-
-
84884930971
-
Recent advances in understanding enteric pathogenic Escherichia coli
-
Croxen, M.A., R.J. Law, R. Scholz, K.M. Keeney, M. Wlodarska, and B.B. Finlay. 2013. Recent advances in understanding enteric pathogenic Escherichia coli. Clin. Microbiol. Rev. 26:822–880
-
(2013)
Clin. Microbiol. Rev
, vol.26
, pp. 822-880
-
-
Croxen, M.A.1
Law, R.J.2
Scholz, R.3
Keeney, K.M.4
Wlodarska, M.5
Finlay, B.B.6
-
7
-
-
84879760435
-
Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children
-
Kang, D.W., J.G. Park, Z.E. Ilhan, G. Wallstrom, J. Labaer, J.B. Adams, and R. Krajmalnik-Brown. 2013. Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children. PLoS One. 8:e68322
-
(2013)
Plos One
, vol.8
-
-
Kang, D.W.1
Park, J.G.2
Ilhan, Z.E.3
Wallstrom, G.4
Labaer, J.5
Adams, J.B.6
Krajmalnik-Brown, R.7
-
8
-
-
84866551081
-
Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin
-
Kim, H.B., K. Borewicz, B.A. White, R.S. Singer, S. Sreevatsan, Z.J. Tu, and R.E. Isaacson. 2012. Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin. Proc. Natl. Acad. Sci. U.S.A. 109:15485–15490
-
(2012)
Proc. Natl. Acad. Sci. U.S.A
, vol.109
, pp. 15485-15490
-
-
Kim, H.B.1
Borewicz, K.2
White, B.A.3
Singer, R.S.4
Sreevatsan, S.5
Tu, Z.J.6
Isaacson, R.E.7
-
9
-
-
84921643461
-
High-throughput 16S rRNA gene sequencing reveals alterations of mouse intestinal microbiota after radiotherapy
-
Kim, Y.S., J. Kim, and S.-J. Park. 2015. High-throughput 16S rRNA gene sequencing reveals alterations of mouse intestinal microbiota after radiotherapy. Anaerobe. 33:1–7
-
(2015)
Anaerobe
, vol.33
, pp. 1-7
-
-
Kim, Y.S.1
Kim, J.2
Park, S.-J.3
-
10
-
-
79955794476
-
Comparative fecal metagenomics unveils unique functional capacity of the swine gut
-
Lamendella, R., J.W. Domingo, S. Ghosh, J. Martinson, and D.B. Oerther. 2011. Comparative fecal metagenomics unveils unique functional capacity of the swine gut. BMC Microbiol. 11:103
-
(2011)
BMC Microbiol
, vol.11
-
-
Lamendella, R.1
Domingo, J.W.2
Ghosh, S.3
Martinson, J.4
Oerther, D.B.5
-
11
-
-
84902798201
-
Outbreak-related porcine epidemic diarrhea virus strains similar to US strains, South Korea, 2013
-
Lee, S., and C. Lee. 2014. Outbreak-related porcine epidemic diarrhea virus strains similar to US strains, South Korea, 2013. Emerg. Infect. Dis. 20:1223–1226
-
(2014)
Emerg. Infect. Dis
, vol.20
, pp. 1223-1226
-
-
Lee, S.1
Lee, C.2
-
12
-
-
34547882462
-
Carnobacterium: Positive and negative effects in the environment and in foods
-
Leisner, J.J., B.G. Laursen, H. Prevost, D. Drider, and P. Dalgaard. 2007. Carnobacterium: positive and negative effects in the environment and in foods. FEMS Microbiol. Rev. 31:592–613
-
(2007)
FEMS Microbiol. Rev
, vol.31
, pp. 592-613
-
-
Leisner, J.J.1
Laursen, B.G.2
Prevost, H.3
Drider, D.4
Dalgaard, P.5
-
13
-
-
0033868844
-
Changes in bacterial community structure in the colon of pigs fed different experimental diets and after infection with Brachyspira hyodysenteriae
-
Leser, T.D., R.H. Lindecrona, T.K. Jensen, B.B. Jensen, and K. Møller. 2000. Changes in bacterial community structure in the colon of pigs fed different experimental diets and after infection with Brachyspira hyodysenteriae. Appl. Environ. Microbiol. 66:3290–3296
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 3290-3296
-
-
Leser, T.D.1
Lindecrona, R.H.2
Jensen, T.K.3
Jensen, B.B.4
Møller, K.5
-
14
-
-
0036154330
-
Culture-independent analysis of gut bacteria: The pig gastrointestinal tract microbiota revisited
-
Leser, T.D., J.Z. Amenuvor, T.K. Jensen, R.H. Lindecrona, M. Boye, and K. Moller. 2002. Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited. Appl. Environ. Microbiol. 68:673–690
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 673-690
-
-
Leser, T.D.1
Amenuvor, J.Z.2
Jensen, T.K.3
Lindecrona, R.H.4
Boye, M.5
Moller, K.6
-
15
-
-
84855717953
-
Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth
-
Lopez-Siles, M., T.M. Khan, S.H. Duncan, H.J. Harmsen, L.J. Garcia-Gil, and H.J. Flint. 2012. Cultured representatives of two major phylogroups of human colonic Faecalibacterium prausnitzii can utilize pectin, uronic acids, and host-derived substrates for growth. Appl. Environ. Microbiol. 78:420–428
-
(2012)
Appl. Environ. Microbiol
, vol.78
, pp. 420-428
-
-
Lopez-Siles, M.1
Khan, T.M.2
Duncan, S.H.3
Harmsen, H.J.4
Garcia-Gil, L.J.5
Flint, H.J.6
-
16
-
-
33646241058
-
Prevalence of Bacteroides and Prevotella spp. In ulcerative colitis
-
Lucke, K., S. Miehlke, E. Jacobs, and M. Schuppler. 2006. Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis. J. Med. Microbiol. 55:617–624
-
(2006)
J. Med. Microbiol
, vol.55
, pp. 617-624
-
-
Lucke, K.1
Miehlke, S.2
Jacobs, E.3
Schuppler, M.4
-
17
-
-
0005625632
-
Letter to the editor
-
Oldham, J. 1972. Letter to the editor. Pig Farming. October Suppl.: 72–73
-
(1972)
Pig Farming
, pp. 72-73
-
-
Oldham, J.1
-
18
-
-
84903438950
-
Characterization of the fecal microbiome in different swine groups by high-throughput sequencing
-
Park, S.-J., J. Kim, J.-S. Lee, S.-K. Rhee, and H. Kim. 2014. Characterization of the fecal microbiome in different swine groups by high-throughput sequencing. Anaerobe. 28:157–162
-
(2014)
Anaerobe
, vol.28
, pp. 157-162
-
-
Park, S.-J.1
Kim, J.2
Lee, J.-S.3
Rhee, S.-K.4
Kim, H.5
-
20
-
-
67650692498
-
Chinese-like strain of porcine epidemic diarrhea virus, Thailand
-
Puranaveja, S., P. Poolperm, P. Lertwatcharasarakul, et al. 2009. Chinese-like strain of porcine epidemic diarrhea virus, Thailand. Emerg. Infect. Dis. 15:1112–1115
-
(2009)
Emerg. Infect. Dis
, vol.15
, pp. 1112-1115
-
-
Puranaveja, S.1
Poolperm, P.2
Lertwatcharasarakul, P.3
-
21
-
-
84896496393
-
Coronaviruses
-
J.J. Zimmerman, L.A. Karriker, A. Ramirez, K.J. Schwartz, and G.W. Stevenson (ed.), 10th ed. Wiley-Blackwell, Ames, IA
-
Saif, L.J., M.B. Pensaert, K. Sestack, S.G. Yeo, and K. Jung. 2012. Coronaviruses, p. 501–524. In J.J. Zimmerman, L.A. Karriker, A. Ramirez, K.J. Schwartz, and G.W. Stevenson (ed.), Diseases of Swine, 10th ed. Wiley-Blackwell, Ames, IA.
-
(2012)
Diseases of Swine
, pp. 501-524
-
-
Saif, L.J.1
Pensaert, M.B.2
Sestack, K.3
Yeo, S.G.4
Jung, K.5
-
22
-
-
84887323708
-
Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
-
Scher, J.U., A. Sczesnak, R.S. Longman, et al. 2013. Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis. eLife. 2:e01202
-
(2013)
Elife
, vol.2
-
-
Scher, J.U.1
Sczesnak, A.2
Longman, R.S.3
-
23
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P.D., S.L. Westcott, T. Ryabin, et al. 2009. Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75:7537–7541
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
-
24
-
-
84862610682
-
Porcine epidemic diarrhoea virus: A comprehensive review of molecular epidemiology, diagnosis, and vaccines
-
Song, D., and B. Park. 2012. Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines. Virus Genes. 44:167–175
-
(2012)
Virus Genes
, vol.44
, pp. 167-175
-
-
Song, D.1
Park, B.2
-
25
-
-
84884153028
-
Emergence of Porcine epidemic diarrhea virus in the United States: Clinical signs, lesions, and viral genomic sequences
-
Stevenson, G.W., H. Hoang, K.J. Schwartz, et al. 2013. Emergence of Porcine epidemic diarrhea virus in the United States: clinical signs, lesions, and viral genomic sequences. J. Vet. Diagn. Invest. 25:649–654
-
(2013)
J. Vet. Diagn. Invest
, vol.25
, pp. 649-654
-
-
Stevenson, G.W.1
Hoang, H.2
Schwartz, K.J.3
-
26
-
-
79953296653
-
Effect of dietary administration of Psychrobacter sp. On the growth, feed utilization, digestive enzymes and immune responses of grouper Epinephelus coioides
-
Sun, Y.Z., H.L. Yang, R.L. Ma, C.X. Zhang, and W.Y. Lin. 2011. Effect of dietary administration of Psychrobacter sp. on the growth, feed utilization, digestive enzymes and immune responses of grouper Epinephelus coioides. Aquacult. Nutr. 17:e733–e740
-
(2011)
Aquacult. Nutr
, vol.17
-
-
Sun, Y.Z.1
Yang, H.L.2
Ma, R.L.3
Zhang, C.X.4
Lin, W.Y.5
-
27
-
-
0020986832
-
An outbreak of swine diarrhea of a new-type associated with coronavirus-like particles in Japan. Jpn
-
Takahashi, K., K. Okada, and K. Ohshima. 1983. An outbreak of swine diarrhea of a new-type associated with coronavirus-like particles in Japan. Jpn. J. Vet. Sci. 45:829–832
-
(1983)
J. Vet. Sci
, vol.45
, pp. 829-832
-
-
Takahashi, K.1
Okada, K.2
Ohshima, K.3
-
28
-
-
0345830652
-
Dysbiosis in inflammatory bowel disease
-
Tamboli, C.P., C. Neut, P. Desreumaux, and J.F. Colombel. 2004. Dysbiosis in inflammatory bowel disease. Gut. 53:1–4
-
(2004)
Gut
, vol.53
, pp. 1-4
-
-
Tamboli, C.P.1
Neut, C.2
Desreumaux, P.3
Colombel, J.F.4
-
29
-
-
33845874101
-
An obesity-associated gut microbiome with increased capacity for energy harvest
-
Turnbaugh, P.J., R.E. Ley, M.A. Mahowald, V. Magrini, E.R. Mardis, and J.I. Gordon. 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027–1031
-
(2006)
Nature
, vol.444
, pp. 1027-1031
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Mahowald, M.A.3
Magrini, V.4
Mardis, E.R.5
Gordon, J.I.6
-
30
-
-
84864276595
-
Probiotic Psychrobacter sp. Improved the autochthonous microbial diversity along the gastrointestinal tract of grouper Epinephelus coioides
-
Yang, H.L., Y.Z. Sun, R.L. Ma, J.S. Li, and K.P. Huang. 2011. Probiotic Psychrobacter sp. improved the autochthonous microbial diversity along the gastrointestinal tract of grouper Epinephelus coioides. J. Aquac. Res. Development S1:001
-
(2011)
J. Aquac. Res. Development
, vol.S1
, pp. 001
-
-
Yang, H.L.1
Sun, Y.Z.2
Ma, R.L.3
Li, J.S.4
Huang, K.P.5
-
31
-
-
84862590343
-
The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates
-
Zoetendal, E.G., J. Raes, B. van den Bogert, M. Arumugam, C.C.G.M. Booijink, F.J. Troost, P. Bork, M. Wels, W.M. de Vos, and M. Kleerebezem. 2012. The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates. ISME J. 6:1415–1426.
-
(2012)
ISME J
, vol.6
, pp. 1415-1426
-
-
Zoetendal, E.G.1
Raes, J.2
Van Den Bogert, B.3
Arumugam, M.4
Booijink, C.5
Troost, F.J.6
Bork, P.7
Wels, M.8
De Vos, W.M.9
Kleerebezem, M.10
|