Centrifugal loop-mediated isothermal amplification microdevice for rapid, multiplex and colorimetric foodborne pathogen detection

Biosensors and Bioelectronics

Volumn 75, Issue , 2016, Pages 293-300

  Oh, Seung Jun ^a   Park, Byung Hyun ^a   Jung, Jae Hwan ^a   Choi, Goro ^a   Lee, Doh C ^a   Kim, Do Hyun ^a   Seo, Tae Seok ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

Centrifugal microdevice; Colorimetric detection; Foodborne pathogen; Loop mediated isothermal amplification; Multiplex detection

Indexed keywords

BACTERIA; CENTRIFUGATION; COLOR; COLORIMETRY; DNA; ESCHERICHIA COLI; FLUIDIC DEVICES; ISOTHERMS; MICROFLUIDICS; MICROSYSTEMS; MULTIPLEXING; PATHOGENS; SALMONELLA; THROUGHPUT;

COLORIMETRIC DETECTION; FOOD-BORNE PATHOGENS; LOOP MEDIATED ISOTHERMAL AMPLIFICATIONS; MICRO-DEVICE; MULTIPLEX DETECTIONS;

FOOD MICROBIOLOGY;

DNA POLYMERASE; GENOMIC DNA; MAGNESIUM ION; PYROPHOSPHATE; BACTERIAL DNA;

ARTICLE; BACTERIUM IDENTIFICATION; COLORIMETRY; CONTROLLED STUDY; ESCHERICHIA COLI; FEASIBILITY STUDY; GENE DOSAGE; GENETIC ANALYSIS; LIMIT OF DETECTION; LOOP MEDIATED ISOTHERMAL AMPLIFICATION MICRODEVICE; MEDICAL DEVICE; MICROORGANISM DETECTION; NONHUMAN; SALMONELLA ENTERICA SEROVAR TYPHIMURIUM; SENSITIVITY ANALYSIS; SIGNAL NOISE RATIO; ULTRAVIOLET RADIATION; VIBRIO PARAHAEMOLYTICUS; ESCHERICHIA COLI O157; FOODBORNE DISEASES; GENETIC PROCEDURES; HUMAN; ISOLATION AND PURIFICATION; LAB ON A CHIP; MICROBIOLOGY; PATHOGENICITY;

BIOSENSING TECHNIQUES; COLORIMETRY; DNA, BACTERIAL; ESCHERICHIA COLI O157; FOODBORNE DISEASES; HUMANS; LAB-ON-A-CHIP DEVICES; LIMIT OF DETECTION; SALMONELLA TYPHIMURIUM; VIBRIO PARAHAEMOLYTICUS;

EID: 84941309557     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2015.08.052     Document Type: Article

References (39)

1. Andersson P., Jesson G., Kylberg G., Ekstrand G., Thorsen G. Anal. Chem. 2007, 79(11):4022-4030.
2. Arunrut N., Kampeera J., Suebsing R., Kiatpathomchai W. J. Virol. Methods 2013, 193(2):542-547.
3. Asiello P.J., Baeumner A.J. Lab Chip 2011, 11(8):1420-1430.
4. Brenner T., Glatzel T., Zengerle R., Ducree J. Lab Chip 2005, 5(2):146-150.
5. Dai T.T., Lu C.C., Lu J., Dong S., Ye W., Wang Y., Zheng X. FEMS Microbiol. Lett. 2012, 334(1):27-34.
6. Dou M., Dominguez D.C., Li X., Sanchez J., Scott G. Anal. Chem. 2014, 86(15):7978-7986.
7. Ducrée J., Haeberle S., Lutz S., Pausch S., Stetten Fv, Zengerle R. J. Micromech. Microeng. 2007, 17(7):S103-S115.
8. Fang X., Chen H., Yu S., Jiang X., Kong J. Anal. Chem. 2011, 83(3):690-695.
9. Fang X., Chen H., Xu L., Jiang X., Wu W., Kong J. Lab Chip 2012, 12(8):1495-1499.
10. Gill P., Ghaemi A. Nucleosides Nucleotides Nucleic Acids 2008, 27(3):224-243.
11. Gorkin R., Park J., Siegrist J., Amasia M., Lee B.S., Park J.M., Kim J., Kim H., Madou M., Cho Y.K. Lab Chip 2010, 10(14):1758-1773.
12. Goto M., Honda E., Ogura A., Nomoto A., Hanaki K. Biotechniques 2009, 46(3):167-172.
13. Grumann M., Geipel A., Riegger L., Zengerle R., Ducree J. Lab Chip 2005, 5(5):560-565.
14. Honda N., Lindberg U., Andersson P., Hoffmann S., Takei H. Clin. Chem. 2005, 51(10):1955-1961.
15. Jung J.H., Park B.H., Choi Y.K., Seo T.S. Lab Chip 2013, 13(17):3383-3388.
16. Jung J.H., Choi S.J., Park B.H., Choi Y.K., Seo T.S. Lab Chip 2012, 12(9):1598-1600.
17. Jung J.H., Oh S.J., Kim Y.T., Kim S.Y., Kim W.J., Jung J., Seo T.S. Anal. Chim. Acta 2015, 853:541-547.
18. Jung J.H., Park B.H., Oh S.J., Choi G., Seo T.S. Biosens. Bioelectron. 2015, 68:218-224.
19. Jung J.H., Park B.H., Oh S.J., Choi G., Seo T.S. Lab Chip 2015, 15(3):718-725.
20. Lafleur J.P., Rackov A.A., McAuley S., Salin E.D. Talanta 2010, 81(1-2):722-726.
21. Liu C., Mauk M.G., Hart R., Bonizzoni M., Yan G., Bau H.H. PLoS One 2012, 7(8):e42222.
22. Liu C., Geva E., Mauk M., Qiu X., Abrams W.R., Malamud D., Curtis K., Owen S.M., Bau H.H. Analyst 2011, 136(10):2069-2076.
23. Luo J., Fang X., Ye D., Li H., Chen H., Zhang S., Kong J. Biosens. Bioelectron. 2014, 60:84-91.
24. Madou M., Zoval J., Jia G., Kido H., Kim J., Kim N. Annu. Rev. Biomed. Eng. 2006, 8:601-628.
25. Mori Y., Nagamine K., Tomita N., Notomi T. Biochem. Biophys. Res. Commun. 2001, 289(1):150-154.
26. Notomi T., Mori Y., Tomita N., Kanda H. J. Microbiol. 2015, 53(1):1-5.
27. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., Hase T. Nucleic Acids Res. 2000, 28:e63.
28. Nwankire C.E., Czugala M., Burger R., Fraser K.J., O'Connell T.M., Glennon T., Onwuliri B.E., Nduaguibe I.E., Diamond D., Ducree J. Biosens. Bioelectron. 2014, 56:352-358.
29. Parida M., Sannarangaiah S., Dash P.K., Rao P.V., Morita K. Rev. Med. Virol. 2008, 18(6):407-421.
30. Park B.H., Jung J.H., Zhang H., Lee N.Y., Seo T.S. Lab Chip 2012, 12(20):3875-3881.
31. Park B.H., Kim D., Jung J.H., Oh S.J., Choi G., Lee D.C., Seo T.S. Sens. Actuators B 2015, 209:927-933.
32. Park B.H., Lee J.H., Jung J.H., Oh S.J., Lee D.C., Seo T.S. RSC Adv. 2015, 5(3):1846-1851.
33. Safavieh M., Ahmed M.U., Sokullu E., Ng A., Braescu L., Zourob M. Analyst 2014, 139(2):482-487.
34. Scallan E., Hoekstra R.M., Angulo F.J., Tauxe R.V., Widdowson M.-A., Roy S.L., Jones J.L., Griffin P.M. Emerg. Infect. Dis. 2011, 17(1):7-15.
35. Strohmeier O., Marquart N., Mark D., Roth G., Zengerle R., von Stetten F. Anal. Methods 2014, 6(7):2038.
36. Strohmeier O., Keller M., Schwemmer F., Zehnle S., Mark D., von Stetten F., Zengerle R., Paust N. Chem. Soc. Rev. 2015, 44:6187-6229.
37. Tomita N., Mori Y., Kanda H., Notomi T. Nat. Protoc. 2008, 3(5):877-882.
38. Velusamy V., Arshak K., Korostynska O., Oliwa K., Adley C. Biotechnol. Adv. 2010, 28(2):232-254.
39. Wong J.K., Yip S.P., Lee T.M. Small 2014, 10(8):1495-1499.