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Volumn 10, Issue MAY2015, 2015, Pages

Genomic encyclopedia of bacterial and archaeal type strains, phase III: The genomes of soil and plant-associated and newly described type strains

Author keywords

Genome sequencing; Prokaryotes; Type stains

Indexed keywords

AGRICULTURE; BIOFUEL PRODUCTION; BIOGEOCHEMISTRY; BIOMASS; CARBON CYCLING; GENE SEQUENCE; GENE TRANSFER; MICROBIAL DIVERSITY; NITROGEN FIXATION; NONHUMAN; NOTE; NUTRITION; PLANT; PROKARYOTE; SOIL;

EID: 84940499463     PISSN: None     EISSN: 19443277     Source Type: Journal    
DOI: 10.1186/s40793-015-0017-x     Document Type: Note
Times cited : (65)

References (22)
  • 2
    • 67650447476 scopus 로고    scopus 로고
    • Fifteen Years of Microbial Genomics: Meeting the challenges and fulfilling the dream
    • Krypides NC. Fifteen Years of Microbial Genomics: Meeting the challenges and fulfilling the dream. Nature Biotech. 2009;27:627.
    • (2009) Nature Biotech , vol.27
    • Krypides, N.C.1
  • 3
    • 0036181778 scopus 로고    scopus 로고
    • Exploring prokaryotic diversity in the genomic era
    • REVIEWS0003
    • Hugenholtz P. Exploring prokaryotic diversity in the genomic era. Genome Biol. 2002;3:REVIEWS0003.
    • (2002) Genome Biol , vol.3
    • Hugenholtz, P.1
  • 4
    • 71449100076 scopus 로고    scopus 로고
    • Mapping the tree of life: Progress and prospects
    • Pace NR. Mapping the tree of life: progress and prospects. Microbiol Mol Biol Rev. 2009;73:565. doi:10.1128/MMBR.00033-09.
    • (2009) Microbiol Mol Biol Rev , vol.73
    • Pace, N.R.1
  • 5
    • 84893384297 scopus 로고    scopus 로고
    • Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project
    • Krypides NC, Woyke T, Eisen JA, Garrity G, Lilburn TG, Beck B, et al. Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project. Stand Genome Sci. 2014;9:1278.
    • (2014) Stand Genome Sci , vol.9
    • Krypides, N.C.1    Woyke, T.2    Eisen, J.A.3    Garrity, G.4    Lilburn, T.G.5    Beck, B.6
  • 7
    • 84881138595 scopus 로고    scopus 로고
    • Insights into the phylogeny and coding potential of microbial dark matter
    • Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng JF, et al. Insights into the phylogeny and coding potential of microbial dark matter. Nature. 2013;499:431. doi:10.1038/nature12352.
    • (2013) Nature , vol.499
    • Rinke, C.1    Schwientek, P.2    Sczyrba, A.3    Ivanova, N.N.4    Erson, I.J.5    Cheng, J.F.6
  • 12
    • 24944587193 scopus 로고    scopus 로고
    • Towards a genome-based taxonomy for prokaryotes
    • Konstantinidis KT, Tiedje JM. Towards a genome-based taxonomy for prokaryotes. J Bacteriol. 2005;187:6258. doi:10.1128/JB.187.18.6258-6264.2005.
    • (2005) J Bacteriol , vol.187
    • Konstantinidis, K.T.1    Tiedje, J.M.2
  • 14
    • 0014754463 scopus 로고
    • Genetic transfer and bacterial taxonomy
    • Jones D, Sneath PHA. Genetic transfer and bacterial taxonomy. Bacteriol Rev. 1970;34:40.
    • (1970) Bacteriol Rev , vol.34
    • Jones, D.1    Sneath, P.2
  • 18
    • 84922530295 scopus 로고    scopus 로고
    • Genomic encyclopedia of bacteria and archaea: Sequencing a myriad of type strains
    • Kyrpides NC, Hugenholtz P, Eisen JA, Woyke T, Goker M, Parker CT, et al. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. PLoS Biol. 2014;12, e1001920. doi:10.1371/journal.pbio.1001920.
    • (2014) Plos Biol , vol.12
    • Kyrpides, N.C.1    Hugenholtz, P.2    Eisen, J.A.3    Woyke, T.4    Goker, M.5    Parker, C.T.6
  • 20
    • 77952889628 scopus 로고    scopus 로고
    • En route to a genome-based classification of Archaea and Bacteria?
    • Klenk HP, Goker M. En route to a genome-based classification of Archaea and Bacteria? System Appl Microbiol. 2010;33:175. doi:10.1016/j.syapm.2010.03.003.
    • (2010) System Appl Microbiol , vol.33
    • Klenk, H.P.1    Goker, M.2
  • 21
    • 58149527706 scopus 로고    scopus 로고
    • A genomic distance based on MUM indicates discontinuity between most bacterial species and genera
    • Deloger M, El Karoui M, Petit MA. A genomic distance based on MUM indicates discontinuity between most bacterial species and genera. J Bacteriol. 2009;191:91. doi:10.1128/JB.01202-08.
    • (2009) J Bacteriol , vol.191
    • Deloger, M.1    El Karoui, M.2    Petit, M.A.3
  • 22
    • 84874011652 scopus 로고    scopus 로고
    • Genome sequence-based species delimitation with confidence intervals and improved distance functions
    • Meier-Kolthoff JP, Auch AF, Klenk HP, Goker M. Genome sequence-based species delimitation with confidence intervals and improved distance functions. BMC Bioinformatics. 2013;14:60. doi:10.1186/1471-2105-14-60.
    • (2013) BMC Bioinformatics , vol.14
    • Meier-Kolthoff, J.P.1    Auch, A.F.2    Klenk, H.P.3    Goker, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.