-
1
-
-
34249800908
-
WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis
-
Baud, S., Mendoza, M.S., To, A., Harscoet, E., Lepiniec, L., and, Dubreucq, B., (2007) WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant J. 50, 825-838.
-
(2007)
Plant J.
, vol.50
, pp. 825-838
-
-
Baud, S.1
Mendoza, M.S.2
To, A.3
Harscoet, E.4
Lepiniec, L.5
Dubreucq, B.6
-
2
-
-
0033579464
-
Sequence and structure-based prediction of eukaryotic protein phosphorylation sites
-
Blom, N., Gammeltoft, S., and, Brunak, S., (1999) Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. J. Mol. Biol. 294, 1351-1362.
-
(1999)
J. Mol. Biol.
, vol.294
, pp. 1351-1362
-
-
Blom, N.1
Gammeltoft, S.2
Brunak, S.3
-
3
-
-
8444234764
-
WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis
-
Cernac, A., and, Benning, C., (2004) WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis. Plant J. 40, 575-585.
-
(2004)
Plant J.
, vol.40
, pp. 575-585
-
-
Cernac, A.1
Benning, C.2
-
4
-
-
84880964732
-
Arabidopsis BPM proteins function as substrate adaptors to a CULLIN3-based E3 ligase to affect fatty acid metabolism in plants
-
Chen, L., Lee, J.H., Weber, H., Tohge, T., Witt, S., Roje, S., Fernie, A.R., and, Hellmann, H., (2013) Arabidopsis BPM proteins function as substrate adaptors to a CULLIN3-based E3 ligase to affect fatty acid metabolism in plants. Plant Cell, 25, 2253-2264.
-
(2013)
Plant Cell
, vol.25
, pp. 2253-2264
-
-
Chen, L.1
Lee, J.H.2
Weber, H.3
Tohge, T.4
Witt, S.5
Roje, S.6
Fernie, A.R.7
Hellmann, H.8
-
5
-
-
11144335485
-
The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1
-
Duek, P.D., Elmer, M.V., van Oosten, V.R., and, Fankhauser, C., (2004) The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1. Curr. Biol. 14, 2296-2301.
-
(2004)
Curr. Biol.
, vol.14
, pp. 2296-2301
-
-
Duek, P.D.1
Elmer, M.V.2
Van Oosten, V.R.3
Fankhauser, C.4
-
6
-
-
0037188377
-
Intrinsic disorder and protein function
-
Dunker, A.K., Brown, C.J., Lawson, J.D., Iakoucheva, L.M., and, Obradovic, Z., (2002) Intrinsic disorder and protein function. Biochemistry, 41, 6573-6582.
-
(2002)
Biochemistry
, vol.41
, pp. 6573-6582
-
-
Dunker, A.K.1
Brown, C.J.2
Lawson, J.D.3
Iakoucheva, L.M.4
Obradovic, Z.5
-
7
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
Dyson, H.J., and, Wright, P.E., (2005) Intrinsically unstructured proteins and their functions. Nat. Rev. Mol. Cell Biol. 6, 197-208.
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
8
-
-
84877120476
-
Regulation of the heat stress response in Arabidopsis by MPK6-targeted phosphorylation of the heat stress factor HsfA2
-
Evrard, A., Kumar, M., Lecourieux, D., Lucks, J., von Koskull-Doring, P., and, Hirt, H., (2013) Regulation of the heat stress response in Arabidopsis by MPK6-targeted phosphorylation of the heat stress factor HsfA2. PeerJ, 1, e59.
-
(2013)
PeerJ
, vol.1
, pp. e59
-
-
Evrard, A.1
Kumar, M.2
Lecourieux, D.3
Lucks, J.4
Von Koskull-Doring, P.5
Hirt, H.6
-
9
-
-
0032159998
-
Wrinkled1: A novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism
-
Focks, N., and, Benning, C., (1998) wrinkled1: a novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism. Plant Physiol. 118, 91-101.
-
(1998)
Plant Physiol.
, vol.118
, pp. 91-101
-
-
Focks, N.1
Benning, C.2
-
10
-
-
84891464661
-
Correlation between posttranslational modification and intrinsic disorder in protein
-
Gao, J., and, Xu, D., (2012) Correlation between posttranslational modification and intrinsic disorder in protein. Pac. Symp. Biocomput. 2012, 94-103.
-
(2012)
Pac. Symp. Biocomput.
, vol.2012
, pp. 94-103
-
-
Gao, J.1
Xu, D.2
-
11
-
-
32044440068
-
Molecular basis for phosphorylation-dependent, PEST-mediated protein turnover
-
Garcia-Alai, M.M., Gallo, M., Salame, M., Wetzler, D.E., McBride, A.A., Paci, M., Cicero, D.O., and, de Prat-Gay, G., (2006) Molecular basis for phosphorylation-dependent, PEST-mediated protein turnover. Structure, 14, 309-319.
-
(2006)
Structure
, vol.14
, pp. 309-319
-
-
Garcia-Alai, M.M.1
Gallo, M.2
Salame, M.3
Wetzler, D.E.4
McBride, A.A.5
Paci, M.6
Cicero, D.O.7
De Prat-Gay, G.8
-
12
-
-
0018128226
-
Lipid extraction of tissues with a low-toxicity solvent
-
Hara, A., and, Radin, N.S., (1978) Lipid extraction of tissues with a low-toxicity solvent. Anal. Biochem. 90, 420-426.
-
(1978)
Anal. Biochem.
, vol.90
, pp. 420-426
-
-
Hara, A.1
Radin, N.S.2
-
13
-
-
0034665253
-
HY5 stability and activity in arabidopsis is regulated by phosphorylation in its COP1 binding domain
-
Hardtke, C.S., Gohda, K., Osterlund, M.T., Oyama, T., Okada, K., and, Deng, X.W., (2000) HY5 stability and activity in arabidopsis is regulated by phosphorylation in its COP1 binding domain. EMBO J. 19, 4997-5006.
-
(2000)
EMBO J.
, vol.19
, pp. 4997-5006
-
-
Hardtke, C.S.1
Gohda, K.2
Osterlund, M.T.3
Oyama, T.4
Okada, K.5
Deng, X.W.6
-
14
-
-
2342473198
-
The importance of intrinsic disorder for protein phosphorylation
-
Iakoucheva, L.M., Radivojac, P., Brown, C.J., O'Connor, T.R., Sikes, J.G., Obradovic, Z., and, Dunker, A.K., (2004) The importance of intrinsic disorder for protein phosphorylation. Nucleic Acids Res. 32, 1037-1049.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1037-1049
-
-
Iakoucheva, L.M.1
Radivojac, P.2
Brown, C.J.3
O'Connor, T.R.4
Sikes, J.G.5
Obradovic, Z.6
Dunker, A.K.7
-
15
-
-
80053924427
-
Senescence-associated barley NAC (NAM, ATAF1,2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domain
-
Kjaersgaard, T., Jensen, M.K., Christiansen, M.W., Gregersen, P., Kragelund, B.B., and, Skriver, K., (2011) Senescence-associated barley NAC (NAM, ATAF1,2, CUC) transcription factor interacts with radical-induced cell death 1 through a disordered regulatory domain. J. Biol. Chem. 286, 35418-35429.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 35418-35429
-
-
Kjaersgaard, T.1
Jensen, M.K.2
Christiansen, M.W.3
Gregersen, P.4
Kragelund, B.B.5
Skriver, K.6
-
16
-
-
84864326658
-
Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R
-
Kong, Q., Pattanaik, S., Feller, A., Werkman, J.R., Chai, C., Wang, Y., Grotewold, E., and, Yuan, L., (2012) Regulatory switch enforced by basic helix-loop-helix and ACT-domain mediated dimerizations of the maize transcription factor R. Proc. Natl Acad. Sci. USA, 109, E2091-E2097.
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. E2091-E2097
-
-
Kong, Q.1
Pattanaik, S.2
Feller, A.3
Werkman, J.R.4
Chai, C.5
Wang, Y.6
Grotewold, E.7
Yuan, L.8
-
17
-
-
84868205256
-
Order by disorder in plant signaling
-
Kragelund, B.B., Jensen, M.K., and, Skriver, K., (2012) Order by disorder in plant signaling. Trends Plant Sci. 17, 625-632.
-
(2012)
Trends Plant Sci.
, vol.17
, pp. 625-632
-
-
Kragelund, B.B.1
Jensen, M.K.2
Skriver, K.3
-
18
-
-
84898892010
-
Correlations between predicted protein disorder and post-translational modifications in plants
-
Kurotani, A., Tokmakov, A.A., Kuroda, Y., Fukami, Y., Shinozaki, K., and, Sakurai, T., (2014) Correlations between predicted protein disorder and post-translational modifications in plants. Bioinformatics, 30, 1095-1103.
-
(2014)
Bioinformatics
, vol.30
, pp. 1095-1103
-
-
Kurotani, A.1
Tokmakov, A.A.2
Kuroda, Y.3
Fukami, Y.4
Shinozaki, K.5
Sakurai, T.6
-
19
-
-
33646069325
-
Oil content of Arabidopsis seeds: The influence of seed anatomy, light and plant-to-plant variation
-
Li, Y., Beisson, F., Pollard, M., and, Ohlrogge, J., (2006) Oil content of Arabidopsis seeds: the influence of seed anatomy, light and plant-to-plant variation. Phytochemistry, 67, 904-915.
-
(2006)
Phytochemistry
, vol.67
, pp. 904-915
-
-
Li, Y.1
Beisson, F.2
Pollard, M.3
Ohlrogge, J.4
-
20
-
-
84875516131
-
Structure, function and networks of transcription factors involved in abiotic stress responses
-
Lindemose, S., O'Shea, C., Jensen, M.K., and, Skriver, K., (2013) Structure, function and networks of transcription factors involved in abiotic stress responses. Int. J. Mol. Sci. 14, 5842-5878.
-
(2013)
Int. J. Mol. Sci.
, vol.14
, pp. 5842-5878
-
-
Lindemose, S.1
O'Shea, C.2
Jensen, M.K.3
Skriver, K.4
-
21
-
-
84880060374
-
Cytoplasmic degradation of the Arabidopsis transcription factor abscisic acid insensitive 5 is mediated by the RING-type E3 ligase KEEP on GOING
-
Liu, H., and, Stone, S.L., (2013) Cytoplasmic degradation of the Arabidopsis transcription factor abscisic acid insensitive 5 is mediated by the RING-type E3 ligase KEEP ON GOING. J. Biol. Chem. 288, 20267-20279.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 20267-20279
-
-
Liu, H.1
Stone, S.L.2
-
22
-
-
0031439931
-
A role for CKII phosphorylation of the cactus PEST domain in dorsoventral patterning of the Drosophila embryo
-
Liu, Z.P., Galindo, R.L., and, Wasserman, S.A., (1997) A role for CKII phosphorylation of the cactus PEST domain in dorsoventral patterning of the Drosophila embryo. Genes Dev. 11, 3413-3422.
-
(1997)
Genes Dev.
, vol.11
, pp. 3413-3422
-
-
Liu, Z.P.1
Galindo, R.L.2
Wasserman, S.A.3
-
23
-
-
33744961763
-
Intrinsic disorder in transcription factors
-
Liu, J., Perumal, N.B., Oldfield, C.J., Su, E.W., Uversky, V.N., and, Dunker, A.K., (2006) Intrinsic disorder in transcription factors. Biochemistry, 45, 6873-6888.
-
(2006)
Biochemistry
, vol.45
, pp. 6873-6888
-
-
Liu, J.1
Perumal, N.B.2
Oldfield, C.J.3
Su, E.W.4
Uversky, V.N.5
Dunker, A.K.6
-
24
-
-
72149087968
-
Increasing seed mass and oil content in transgenic Arabidopsis by the overexpression of wri1-like gene from Brassica napus
-
Liu, J., Hua, W., Zhan, G., Wei, F., Wang, X., Liu, G., and, Wang, H., (2010) Increasing seed mass and oil content in transgenic Arabidopsis by the overexpression of wri1-like gene from Brassica napus. Plant Physiol. Biochem. 48, 9-15.
-
(2010)
Plant Physiol. Biochem.
, vol.48
, pp. 9-15
-
-
Liu, J.1
Hua, W.2
Zhan, G.3
Wei, F.4
Wang, X.5
Liu, G.6
Wang, H.7
-
25
-
-
84867005296
-
Validation of reference genes for gene expression studies in virus-infected Nicotiana benthamiana using quantitative real-time PCR
-
Liu, D., Shi, L., Han, C., Yu, J., Li, D., and, Zhang, Y., (2012) Validation of reference genes for gene expression studies in virus-infected Nicotiana benthamiana using quantitative real-time PCR. PLoS ONE, 7, e46451.
-
(2012)
PLoS ONE
, vol.7
, pp. e46451
-
-
Liu, D.1
Shi, L.2
Han, C.3
Yu, J.4
Li, D.5
Zhang, Y.6
-
26
-
-
77957237052
-
The C-terminal domain of FUSCA3 negatively regulates mRNA and protein levels, and mediates sensitivity to the hormones abscisic acid and gibberellic acid in Arabidopsis
-
Lu, Q.S., Paz, J.D., Pathmanathan, A., Chiu, R.S., Tsai, A.Y., and, Gazzarrini, S., (2010) The C-terminal domain of FUSCA3 negatively regulates mRNA and protein levels, and mediates sensitivity to the hormones abscisic acid and gibberellic acid in Arabidopsis. Plant J. 64, 100-113.
-
(2010)
Plant J.
, vol.64
, pp. 100-113
-
-
Lu, Q.S.1
Paz, J.D.2
Pathmanathan, A.3
Chiu, R.S.4
Tsai, A.Y.5
Gazzarrini, S.6
-
27
-
-
84880825628
-
Wrinkled1, a ubiquitous regulator in oil accumulating tissues from Arabidopsis embryos to oil palm mesocarp
-
Ma, W., Kong, Q., Arondel, V., Kilaru, A., Bates, P.D., Thrower, N.A., Benning, C., and, Ohlrogge, J.B., (2013) Wrinkled1, a ubiquitous regulator in oil accumulating tissues from Arabidopsis embryos to oil palm mesocarp. PLoS ONE, 8, e68887.
-
(2013)
PLoS ONE
, vol.8
, pp. e68887
-
-
Ma, W.1
Kong, Q.2
Arondel, V.3
Kilaru, A.4
Bates, P.D.5
Thrower, N.A.6
Benning, C.7
Ohlrogge, J.B.8
-
28
-
-
70350505797
-
An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis
-
Maeo, K., Tokuda, T., Ayame, A., Mitsui, N., Kawai, T., Tsukagoshi, H., Ishiguro, S., and, Nakamura, K., (2009) An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis. Plant J. 60, 476-487.
-
(2009)
Plant J.
, vol.60
, pp. 476-487
-
-
Maeo, K.1
Tokuda, T.2
Ayame, A.3
Mitsui, N.4
Kawai, T.5
Tsukagoshi, H.6
Ishiguro, S.7
Nakamura, K.8
-
29
-
-
85027929401
-
Transcriptional regulation of fatty acid production in higher plants: Molecular bases and biotechnological outcomes
-
Marchive, C., Nikovics, K., To, A., Lepiniec, L., and, Baud, S., (2014) Transcriptional regulation of fatty acid production in higher plants: molecular bases and biotechnological outcomes. Eur. J. Lipid Sci. Technol. 116, 1332-1343.
-
(2014)
Eur. J. Lipid Sci. Technol.
, vol.116
, pp. 1332-1343
-
-
Marchive, C.1
Nikovics, K.2
To, A.3
Lepiniec, L.4
Baud, S.5
-
30
-
-
84873954938
-
The intrinsically disordered N-terminal region of AtREM1.3 remorin protein mediates protein-protein interactions
-
Marin, M., Thallmair, V., and, Ott, T., (2012) The intrinsically disordered N-terminal region of AtREM1.3 remorin protein mediates protein-protein interactions. J. Biol. Chem. 287, 39982-39991.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 39982-39991
-
-
Marin, M.1
Thallmair, V.2
Ott, T.3
-
31
-
-
18444397766
-
ACTIVATOR of Spomin:LUC1/WRINKLED1 of Arabidopsis thaliana transactivates sugar-inducible promoters
-
Masaki, T., Mitsui, N., Tsukagoshi, H., Nishii, T., Morikami, A., and, Nakamura, K., (2005) ACTIVATOR of Spomin:LUC1/WRINKLED1 of Arabidopsis thaliana transactivates sugar-inducible promoters. Plant Cell Physiol. 46, 547-556.
-
(2005)
Plant Cell Physiol.
, vol.46
, pp. 547-556
-
-
Masaki, T.1
Mitsui, N.2
Tsukagoshi, H.3
Nishii, T.4
Morikami, A.5
Nakamura, K.6
-
32
-
-
79956098305
-
PEST motif serine and tyrosine phosphorylation controls vascular endothelial growth factor receptor 2 stability and downregulation
-
Meyer, R.D., Srinivasan, S., Singh, A.J., Mahoney, J.E., Gharahassanlou, K.R., and, Rahimi, N., (2011) PEST motif serine and tyrosine phosphorylation controls vascular endothelial growth factor receptor 2 stability and downregulation. Mol. Cell. Biol. 31, 2010-2025.
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 2010-2025
-
-
Meyer, R.D.1
Srinivasan, S.2
Singh, A.J.3
Mahoney, J.E.4
Gharahassanlou, K.R.5
Rahimi, N.6
-
33
-
-
0024396320
-
Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins
-
Mitchell, P.J., and, Tjian, R., (1989) Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins. Science, 245, 371-378.
-
(1989)
Science
, vol.245
, pp. 371-378
-
-
Mitchell, P.J.1
Tjian, R.2
-
34
-
-
79960250891
-
ICE1 Ser403 is necessary for protein stabilization and regulation of cold signaling and tolerance
-
Miura, K., Ohta, M., Nakazawa, M., Ono, M., and, Hasegawa, P.M., (2011) ICE1 Ser403 is necessary for protein stabilization and regulation of cold signaling and tolerance. Plant J. 67, 269-279.
-
(2011)
Plant J.
, vol.67
, pp. 269-279
-
-
Miura, K.1
Ohta, M.2
Nakazawa, M.3
Ono, M.4
Hasegawa, P.M.5
-
35
-
-
84871753961
-
GmDREB2A;2, a canonical DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN2-type transcription factor in soybean, is posttranslationally regulated and mediates dehydration-responsive element-dependent gene expression
-
Mizoi, J., Ohori, T., Moriwaki, T., Kidokoro, S., Todaka, D., Maruyama, K., Kusakabe, K., Osakabe, Y., Shinozaki, K., and, Yamaguchi-Shinozaki, K., (2013) GmDREB2A;2, a canonical DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN2-type transcription factor in soybean, is posttranslationally regulated and mediates dehydration-responsive element-dependent gene expression. Plant Physiol. 161, 346-361.
-
(2013)
Plant Physiol.
, vol.161
, pp. 346-361
-
-
Mizoi, J.1
Ohori, T.2
Moriwaki, T.3
Kidokoro, S.4
Todaka, D.5
Maruyama, K.6
Kusakabe, K.7
Osakabe, Y.8
Shinozaki, K.9
Yamaguchi-Shinozaki, K.10
-
36
-
-
13644257647
-
Comparing and combining predictors of mostly disordered proteins
-
Oldfield, C.J., Cheng, Y., Cortese, M.S., Brown, C.J., Uversky, V.N., and, Dunker, A.K., (2005) Comparing and combining predictors of mostly disordered proteins. Biochemistry, 44, 1989-2000.
-
(2005)
Biochemistry
, vol.44
, pp. 1989-2000
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Brown, C.J.4
Uversky, V.N.5
Dunker, A.K.6
-
37
-
-
84896351549
-
Protein intrinsic disorder in plants
-
Pazos, F., Pietrosemoli, N., Garcia-Martin, J.A., and, Solano, R., (2013) Protein intrinsic disorder in plants. Front. Plant Sci. 4, 363.
-
(2013)
Front. Plant Sci.
, vol.4
, pp. 363
-
-
Pazos, F.1
Pietrosemoli, N.2
Garcia-Martin, J.A.3
Solano, R.4
-
38
-
-
79958030700
-
Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis
-
Pouvreau, B., Baud, S., Vernoud, V., Morin, V., Py, C., Gendrot, G., Pichon, J.P., Rouster, J., Paul, W., and, Rogowsky, P.M., (2011) Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. Plant Physiol. 156, 674-686.
-
(2011)
Plant Physiol.
, vol.156
, pp. 674-686
-
-
Pouvreau, B.1
Baud, S.2
Vernoud, V.3
Morin, V.4
Py, C.5
Gendrot, G.6
Pichon, J.P.7
Rouster, J.8
Paul, W.9
Rogowsky, P.M.10
-
39
-
-
0043130638
-
Prediction of boundaries between intrinsically ordered and disordered protein regions
-
Radivojac, P., Obradovic, Z., Brown, C.J., and, Dunker, A.K., (2003) Prediction of boundaries between intrinsically ordered and disordered protein regions. Pac. Symp. Biocomput. 2003, 216-227.
-
(2003)
Pac. Symp. Biocomput.
, vol.2003
, pp. 216-227
-
-
Radivojac, P.1
Obradovic, Z.2
Brown, C.J.3
Dunker, A.K.4
-
40
-
-
0030200110
-
PEST sequences and regulation by proteolysis
-
Rechsteiner, M., and, Rogers, S.W., (1996) PEST sequences and regulation by proteolysis. Trends Biochem. Sci. 21, 267-271.
-
(1996)
Trends Biochem. Sci.
, vol.21
, pp. 267-271
-
-
Rechsteiner, M.1
Rogers, S.W.2
-
41
-
-
0022971952
-
Amino acid sequences common to rapidly degraded proteins: The PEST hypothesis
-
Rogers, S., Wells, R., and, Rechsteiner, M., (1986) Amino acid sequences common to rapidly degraded proteins: the PEST hypothesis. Science, 234, 364-368.
-
(1986)
Science
, vol.234
, pp. 364-368
-
-
Rogers, S.1
Wells, R.2
Rechsteiner, M.3
-
42
-
-
0035188314
-
Sequence complexity of disordered protein
-
Romero, P., Obradovic, Z., Li, X., Garner, E.C., Brown, C.J., and, Dunker, A.K., (2001) Sequence complexity of disordered protein. Proteins, 42, 38-48.
-
(2001)
Proteins
, vol.42
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.J.5
Dunker, A.K.6
-
43
-
-
0035983837
-
Contrapuntal networks of gene expression during Arabidopsis seed filling
-
Ruuska, S.A., Girke, T., Benning, C., and, Ohlrogge, J.B., (2002) Contrapuntal networks of gene expression during Arabidopsis seed filling. Plant Cell, 14, 1191-1206.
-
(2002)
Plant Cell
, vol.14
, pp. 1191-1206
-
-
Ruuska, S.A.1
Girke, T.2
Benning, C.3
Ohlrogge, J.B.4
-
44
-
-
33745477457
-
Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression
-
Sakuma, Y., Maruyama, K., Osakabe, Y., Qin, F., Seki, M., Shinozaki, K., and, Yamaguchi-Shinozaki, K., (2006a) Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression. Plant Cell, 18, 1292-1309.
-
(2006)
Plant Cell
, vol.18
, pp. 1292-1309
-
-
Sakuma, Y.1
Maruyama, K.2
Osakabe, Y.3
Qin, F.4
Seki, M.5
Shinozaki, K.6
Yamaguchi-Shinozaki, K.7
-
45
-
-
33845509639
-
Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression
-
Sakuma, Y., Maruyama, K., Qin, F., Osakabe, Y., Shinozaki, K., and, Yamaguchi-Shinozaki, K., (2006b) Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression. Proc. Natl Acad. Sci. USA, 103, 18822-18827.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 18822-18827
-
-
Sakuma, Y.1
Maruyama, K.2
Qin, F.3
Osakabe, Y.4
Shinozaki, K.5
Yamaguchi-Shinozaki, K.6
-
46
-
-
0035933804
-
Direct phosphorylation of NF-κB1 p105 by the IκB kinase complex on serine 927 is essential for signal-induced p105 proteolysis
-
Salmeron, A., Janzen, J., Soneji, Y., Bump, N., Kamens, J., Allen, H., and, Ley, S.C., (2001) Direct phosphorylation of NF-κB1 p105 by the IκB kinase complex on serine 927 is essential for signal-induced p105 proteolysis. J. Biol. Chem. 276, 22215-22222.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 22215-22222
-
-
Salmeron, A.1
Janzen, J.2
Soneji, Y.3
Bump, N.4
Kamens, J.5
Allen, H.6
Ley, S.C.7
-
47
-
-
79958041464
-
Increasing the energy density of vegetative tissues by diverting carbon from starch to oil biosynthesis in transgenic Arabidopsis
-
Sanjaya, Durrett, and, T.P., Weise, S.E. and Benning, C., (2011) Increasing the energy density of vegetative tissues by diverting carbon from starch to oil biosynthesis in transgenic Arabidopsis. Plant. Biotechnol. J. 9, 874-883.
-
(2011)
Plant. Biotechnol. J.
, vol.9
, pp. 874-883
-
-
Durrett, T.P.1
Weise, S.E.2
Benning, C.3
-
48
-
-
77954257814
-
Expression of ZmLEC1 and ZmWRI1 increases seed oil production in maize
-
Shen, B., Allen, W.B., Zheng, P., Li, C., Glassman, K., Ranch, J., Nubel, D., and, Tarczynski, M.C., (2010) Expression of ZmLEC1 and ZmWRI1 increases seed oil production in maize. Plant Physiol. 153, 980-987.
-
(2010)
Plant Physiol.
, vol.153
, pp. 980-987
-
-
Shen, B.1
Allen, W.B.2
Zheng, P.3
Li, C.4
Glassman, K.5
Ranch, J.6
Nubel, D.7
Tarczynski, M.C.8
-
49
-
-
30144437939
-
Intrinsic unstructuredness and abundance of PEST motifs in eukaryotic proteomes
-
Singh, G.P., Ganapathi, M., Sandhu, K.S., and, Dash, D., (2006) Intrinsic unstructuredness and abundance of PEST motifs in eukaryotic proteomes. Proteins, 62, 309-315.
-
(2006)
Proteins
, vol.62
, pp. 309-315
-
-
Singh, G.P.1
Ganapathi, M.2
Sandhu, K.S.3
Dash, D.4
-
50
-
-
78649781279
-
The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover
-
Sirichandra, C., Davanture, M., Turk, B.E., Zivy, M., Valot, B., Leung, J., and, Merlot, S., (2010) The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover. PLoS One, 5, e13935.
-
(2010)
PLoS One
, vol.5
, pp. e13935
-
-
Sirichandra, C.1
Davanture, M.2
Turk, B.E.3
Zivy, M.4
Valot, B.5
Leung, J.6
Merlot, S.7
-
51
-
-
84857648074
-
AKIN10 and FUSCA3 interact to control lateral organ development and phase transitions in Arabidopsis
-
Tsai, A.Y., and, Gazzarrini, S., (2012) AKIN10 and FUSCA3 interact to control lateral organ development and phase transitions in Arabidopsis. Plant J. 69, 809-821.
-
(2012)
Plant J.
, vol.69
, pp. 809-821
-
-
Tsai, A.Y.1
Gazzarrini, S.2
-
52
-
-
34447539760
-
Composition Profiler: A tool for discovery and visualization of amino acid composition differences
-
Vacic, V., Uversky, V.N., Dunker, A.K., and, Lonardi, S., (2007) Composition Profiler: a tool for discovery and visualization of amino acid composition differences. BMC Bioinformatics, 8, 211.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 211
-
-
Vacic, V.1
Uversky, V.N.2
Dunker, A.K.3
Lonardi, S.4
-
53
-
-
84881095556
-
The intrinsically disordered C-terminal region of Arabidopsis thaliana TCP8 transcription factor acts both as a transactivation and self-assembly domain
-
Valsecchi, I., Guittard-Crilat, E., Maldiney, R., Habricot, Y., Lignon, S., Lebrun, R., Miginiac, E., Ruelland, E., Jeannette, E., and, Lebreton, S., (2013) The intrinsically disordered C-terminal region of Arabidopsis thaliana TCP8 transcription factor acts both as a transactivation and self-assembly domain. Mol. BioSyst. 9, 2282-2295.
-
(2013)
Mol. BioSyst.
, vol.9
, pp. 2282-2295
-
-
Valsecchi, I.1
Guittard-Crilat, E.2
Maldiney, R.3
Habricot, Y.4
Lignon, S.5
Lebrun, R.6
Miginiac, E.7
Ruelland, E.8
Jeannette, E.9
Lebreton, S.10
-
54
-
-
84873702363
-
Synergistic effect of WRI1 and DGAT1 coexpression on triacylglycerol biosynthesis in plants
-
Vanhercke, T., El Tahchy, A., Shrestha, P., Zhou, X.R., Singh, S.P., and, Petrie, J.R., (2013) Synergistic effect of WRI1 and DGAT1 coexpression on triacylglycerol biosynthesis in plants. FEBS Lett. 587, 364-369.
-
(2013)
FEBS Lett.
, vol.587
, pp. 364-369
-
-
Vanhercke, T.1
El Tahchy, A.2
Shrestha, P.3
Zhou, X.R.4
Singh, S.P.5
Petrie, J.R.6
-
55
-
-
70349667334
-
Biochemical insights on degradation of Arabidopsis della proteins gained from a cell-free assay system
-
Wang, F., Zhu, D., Huang, X., Li, S., Gong, Y., Yao, Q., Fu, X., Fan, L.M., and, Deng, X.W., (2009) Biochemical insights on degradation of Arabidopsis DELLA proteins gained from a cell-free assay system. Plant Cell, 21, 2378-2390.
-
(2009)
Plant Cell
, vol.21
, pp. 2378-2390
-
-
Wang, F.1
Zhu, D.2
Huang, X.3
Li, S.4
Gong, Y.5
Yao, Q.6
Fu, X.7
Fan, L.M.8
Deng, X.W.9
-
56
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
Ward, J.J., Sodhi, J.S., McGuffin, L.J., Buxton, B.F., and, Jones, D.T., (2004) Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J. Mol. Biol. 337, 635-645.
-
(2004)
J. Mol. Biol.
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
57
-
-
84902107369
-
BnWRI1 coordinates fatty acid biosynthesis and photosynthesis pathways during oil accumulation in rapeseed
-
Wu, X.L., Liu, Z.H., Hu, Z.H., and, Huang, R.Z., (2014) BnWRI1 coordinates fatty acid biosynthesis and photosynthesis pathways during oil accumulation in rapeseed. J. Integr. Plant Biol. 56, 582-593.
-
(2014)
J. Integr. Plant Biol.
, vol.56
, pp. 582-593
-
-
Wu, X.L.1
Liu, Z.H.2
Hu, Z.H.3
Huang, R.Z.4
-
58
-
-
76849087968
-
PONDR-FIT: A meta-predictor of intrinsically disordered amino acids
-
Xue, B., Dunbrack, R.L., Williams, R.W., Dunker, A.K., and, Uversky, V.N., (2010) PONDR-FIT: a meta-predictor of intrinsically disordered amino acids. Biochim. Biophys. Acta, 1804, 996-1010.
-
(2010)
Biochim. Biophys. Acta
, vol.1804
, pp. 996-1010
-
-
Xue, B.1
Dunbrack, R.L.2
Williams, R.W.3
Dunker, A.K.4
Uversky, V.N.5
-
59
-
-
77953212311
-
VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis
-
Yamaguchi, M., Ohtani, M., Mitsuda, N., Kubo, M., Ohme-Takagi, M., Fukuda, H., and, Demura, T., (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell, 22, 1249-1263.
-
(2010)
Plant Cell
, vol.22
, pp. 1249-1263
-
-
Yamaguchi, M.1
Ohtani, M.2
Mitsuda, N.3
Kubo, M.4
Ohme-Takagi, M.5
Fukuda, H.6
Demura, T.7
-
60
-
-
20744437001
-
RONN: The bio-basis function neural network technique applied to the detection of natively disordered regions in proteins
-
Yang, Z.R., Thomson, R., McNeil, P., and, Esnouf, R.M., (2005) RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins. Bioinformatics, 21, 3369-3376.
-
(2005)
Bioinformatics
, vol.21
, pp. 3369-3376
-
-
Yang, Z.R.1
Thomson, R.2
McNeil, P.3
Esnouf, R.M.4
-
61
-
-
0037133960
-
BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation
-
Yin, Y., Wang, Z.Y., Mora-Garcia, S., Li, J., Yoshida, S., Asami, T., and, Chory, J., (2002) BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. Cell, 109, 181-191.
-
(2002)
Cell
, vol.109
, pp. 181-191
-
-
Yin, Y.1
Wang, Z.Y.2
Mora-Garcia, S.3
Li, J.4
Yoshida, S.5
Asami, T.6
Chory, J.7
-
62
-
-
84876852388
-
Phosphorylation-coupled proteolysis of the transcription factor MYC2 is important for jasmonate-signaled plant immunity
-
Zhai, Q., Yan, L., Tan, D., Chen, R., Sun, J., Gao, L., Dong, M.Q., Wang, Y., and, Li, C., (2013) Phosphorylation-coupled proteolysis of the transcription factor MYC2 is important for jasmonate-signaled plant immunity. PLoS Genet. 9, e1003422.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003422
-
-
Zhai, Q.1
Yan, L.2
Tan, D.3
Chen, R.4
Sun, J.5
Gao, L.6
Dong, M.Q.7
Wang, Y.8
Li, C.9
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