-
1
-
-
31144445851
-
RpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov.
-
Adékambi T, Berger P, Raoult D, Drancourt M. 2006. rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov. Int J Syst Evol Microbiol 56:133-143. http://dx.doi.org/10.1099/ijs.0.63969-0.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 133-143
-
-
Adékambi, T.1
Berger, P.2
Raoult, D.3
Drancourt, M.4
-
2
-
-
10844276234
-
Amoebal coculture of "mycobacterium massiliense" sp. nov. from the sputum of a patient with hemoptoic pneumonia
-
Adékambi T, Reynaud-Gaubert M, Greub G, Gevaudan MJ, La Scola B, Raoult D, Drancourt M. 2004. Amoebal coculture of "Mycobacterium massiliense" sp. nov. from the sputum of a patient with hemoptoic pneumonia. J Clin Microbiol 42:5493-5501. http://dx.doi.org/10.1128/JCM.42/12.5493-5501.2004.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 5493-5501
-
-
Adékambi, T.1
Reynaud-Gaubert, M.2
Greub, G.3
Gevaudan, M.J.4
La Scola, B.5
Raoult, D.6
Drancourt, M.7
-
3
-
-
84924842094
-
An unusual acid-fast infection of the knee with subcutaneous, abscess-like lesions of the gluteal region; Report of a case with a study of the organism, Mycobacterium abscessus, n
-
Moore M, Frerichs JB. 1953. An unusual acid-fast infection of the knee with subcutaneous, abscess-like lesions of the gluteal region; report of a case with a study of the organism, Mycobacterium abscessus, n. sp. J Investig Dermatol 20:133-169.
-
(1953)
Sp. J Investig Dermatol
, vol.20
, pp. 133-169
-
-
Moore, M.1
Frerichs, J.B.2
-
4
-
-
80054753988
-
Proposal that Mycobacterium massiliense and Mycobacterium bolletii be united and reclassified as Mycobacterium abscessus subsp. bolletii comb. nov., designation of Mycobacterium abscessus subsp. abscessus subsp. nov. and emended description of Mycobacterium abscessus
-
Leao SC, Tortoli E, Euzeby JP, Garcia MJ. 2011. Proposal that Mycobacterium massiliense and Mycobacterium bolletii be united and reclassified as Mycobacterium abscessus subsp. bolletii comb. nov., designation of Mycobacterium abscessus subsp. abscessus subsp. nov. and emended description of Mycobacterium abscessus. Int J Syst Evol Microbiol 61:2311-2313. http://dx.doi.org/10.1099/ijs.0.023770-0.
-
(2011)
Int J Syst Evol Microbiol
, vol.61
, pp. 2311-2313
-
-
Leao, S.C.1
Tortoli, E.2
Euzeby, J.P.3
Garcia, M.J.4
-
5
-
-
84896703771
-
The genome sequence of 'Mycobacterium massiliense' strain CIP 108297 suggests the independent taxonomic status of the Mycobacterium abscessus complex at the subspecies level
-
Cho YJ, Yi H, Chun J, Cho SN, Daley CL, Koh WJ, Shin SJ. 2013. The genome sequence of 'Mycobacterium massiliense' strain CIP 108297 suggests the independent taxonomic status of the Mycobacterium abscessus complex at the subspecies level. PLoS One 8:e81560. http://dx.doi.org/10/1371/journal.pone.0081560.
-
(2013)
PLoS One
, vol.8
, pp. e81560
-
-
Cho, Y.J.1
Yi, H.2
Chun, J.3
Cho, S.N.4
Daley, C.L.5
Koh, W.J.6
Shin, S.J.7
-
6
-
-
79551545950
-
Clinical significance of differentiation of Mycobacterium massiliense from Mycobacterium absces-sus
-
Koh WJ, Jeon K, Lee NY, Kim BJ, Kook YH, Lee SH, Park YK, Kim CK, Shin SJ, Huitt GA, Daley CL, Kwon OJ. 2011. Clinical significance of differentiation of Mycobacterium massiliense from Mycobacterium absces-sus. Am J Respir Crit Care Med 183:405-410. http://dx.doi.org/10.1164/rccm.201003-0395OC.
-
(2011)
Am J Respir Crit Care Med
, vol.183
, pp. 405-410
-
-
Koh, W.J.1
Jeon, K.2
Lee, N.Y.3
Kim, B.J.4
Kook, Y.H.5
Lee, S.H.6
Park, Y.K.7
Kim, C.K.8
Shin, S.J.9
Huitt, G.A.10
Daley, C.L.11
Kwon, O.J.12
-
7
-
-
84889957258
-
A phylogenomic approach to bacterial subspecies classification: Proof of concept in Mycobacterium abscessus
-
Tan JL, Khang TF, Ngeow YF, Choo SW. 2013. A phylogenomic approach to bacterial subspecies classification: proof of concept in Mycobacterium abscessus. BMC Genomics 14:879. http://dx.doi.org/10.1186/1471/2164-14-879.
-
(2013)
BMC Genomics
, vol.14
, pp. 879
-
-
Tan, J.L.1
Khang, T.F.2
Ngeow, Y.F.3
Choo, S.W.4
-
8
-
-
84865197319
-
Molecular typing of Mycobacterium abscessus based on tandem-repeat polymorphism
-
Wong YL, Ong CS, Ngeow YF. 2012. Molecular typing of Mycobacterium abscessus based on tandem-repeat polymorphism. J Clin Microbiol 50: 3084-3088. http://dx.doi.org/10.1128/JCM.00753-12.
-
(2012)
J Clin Microbiol
, vol.50
, pp. 3084-3088
-
-
Wong, Y.L.1
Ong, C.S.2
Ngeow, Y.F.3
-
9
-
-
0035875343
-
GeneMarkS: A selftraining method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
-
Besemer J, Lomsadze A, Borodovsky M. 2001. GeneMarkS: a selftraining method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions. Nucleic Acids Res 29:2607-2618. http://dx.doi.org/10.1093/nar/29.12.2607.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 2607-2618
-
-
Besemer, J.1
Lomsadze, A.2
Borodovsky, M.3
-
10
-
-
84870431038
-
CD-HIT: Accelerated for clustering the next-generation sequencing data
-
Fu L, Niu B, Zhu Z, Wu S, Li W. 2012. CD-HIT: accelerated for clustering the next-generation sequencing data. Bioinformatics 28:3150-3152. http://dx.doi.org/10.1093/bioinformatics/bts565.
-
(2012)
Bioinformatics
, vol.28
, pp. 3150-3152
-
-
Fu, L.1
Niu, B.2
Zhu, Z.3
Wu, S.4
Li, W.5
-
11
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403-410. http://dx.doi.org/10.1016/S0022-2836(05)80360-2.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
12
-
-
84934440243
-
MAFFT: Iterative refinement and additional methods
-
Katoh K, Standley DM. 2014. MAFFT: iterative refinement and additional methods. Methods Mol Biol 1079:131-146. http://dx.doi.org/10/1007/978-1-62703-646-7-8.
-
(2014)
Methods Mol Biol
, vol.1079
, pp. 131-146
-
-
Katoh, K.1
Standley, D.M.2
-
13
-
-
33747847779
-
PAL2NAL: Robust conversion of protein sequence alignments into the corresponding codon alignments
-
Suyama M, Torrents D, Bork P. 2006. PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Nucleic Acids Res 34:W609-612. http://dx.doi.org/10.1093/nar/gkl315.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W609-612
-
-
Suyama, M.1
Torrents, D.2
Bork, P.3
-
14
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D. 2006. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23:254-267. http://dx.doi.org/10/1093/molbev/msj030.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
15
-
-
17044401319
-
Networks in phylogenetic analysis: New tools for population biology
-
Morrison DA. 2005. Networks in phylogenetic analysis: new tools for population biology. Int J Parasitol 35:567-582. http://dx.doi.org/10.1016/j.ijpara.2005.02.007.
-
(2005)
Int J Parasitol
, vol.35
, pp. 567-582
-
-
Morrison, D.A.1
-
16
-
-
33646167864
-
A simple and robust statistical test for detecting the presence of recombination
-
Bruen TC, Philippe H, Bryant D. 2006. A simple and robust statistical test for detecting the presence of recombination. Genetics 172:2665-2681. http://dx.doi.org/10.1534/genetics.105.048975.
-
(2006)
Genetics
, vol.172
, pp. 2665-2681
-
-
Bruen, T.C.1
Philippe, H.2
Bryant, D.3
-
17
-
-
84912053711
-
Mycobacterium abscessus subsp abscessus lung disease: Trouble ahead, trouble behind
-
Griffith DE. 2014. Mycobacterium abscessus subsp abscessus lung disease: 'trouble ahead, trouble behind. . . .' F1000Prime Rep 6:107. http://dx.doi/org/10.12703/P6-107.
-
(2014)
F1000Prime Rep
, vol.6
, pp. 107
-
-
Griffith, D.E.1
-
18
-
-
84922334305
-
The drug susceptibility profile and inducible resistance to macrolides of Mycobacterium abscessus and Mycobacterium massiliense in Korea
-
Kim SY, Kim CK, Bae IK, Jeong SH, Yim JJ, Jung JY, Park MS, Kim YS, Kim SK, Chang J, Kang YA. 2015. The drug susceptibility profile and inducible resistance to macrolides of Mycobacterium abscessus and Mycobacterium massiliense in Korea. Diagn Microbiol Infect Dis 81:107-111. http://dx.doi.org/10.1016/j.diagmicrobio.2014.10.007.
-
(2015)
Diagn Microbiol Infect Dis
, vol.81
, pp. 107-111
-
-
Kim, S.Y.1
Kim, C.K.2
Bae, I.K.3
Jeong, S.H.4
Yim, J.J.5
Jung, J.Y.6
Park, M.S.7
Kim, Y.S.8
Kim, S.K.9
Chang, J.10
Kang, Y.A.11
-
19
-
-
84903708791
-
Species identification of Mycobacterium abscessus subsp. abscessus and Mycobacterium abscessus subsp. bolletii using rpoB and hsp65, and susceptibility testing to eight antibiotics
-
Nie W, Duan H, Huang H, Lu Y, Bi D, Chu N. 2014. Species identification of Mycobacterium abscessus subsp. abscessus and Mycobacterium abscessus subsp. bolletii using rpoB and hsp65, and susceptibility testing to eight antibiotics. Int J Infect Dis 25:170-174. http://dx.doi.org/10.1016/j/ijid.2014.02.014.
-
(2014)
Int J Infect Dis
, vol.25
, pp. 170-174
-
-
Nie, W.1
Duan, H.2
Huang, H.3
Lu, Y.4
Bi, D.5
Chu, N.6
|