Organic acids from lignocellulose: Candida lignohabitans as a new microbial cell factory

Journal of Industrial Microbiology and Biotechnology

Volumn 42, Issue 5, 2015, Pages 681-691

  Bellasio, Martina ^a   Mattanovich, Diethard ^a,b   Sauer, Michael ^a,b   Marx, Hans ^a  

^a UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

^b AUSTRIAN CENTRE OF INDUSTRIAL BIOTECHNOLOGY   (Austria)

Author keywords

Biorefinery; Candida lignohabitans; Itaconic acid production; Lactic acid production; Microbial cell factory

Indexed keywords

ACONITATE DECARBOXYLASE; ARABINOSE; CARBOXYLYASE; ITACONIC ACID; LACTATE DEHYDROGENASE; LACTIC ACID; LIGNIN; LIGNOCELLULOSE; SUCCINIC ACID DERIVATIVE; XYLOSE;

BIOREACTOR; BIOSYNTHESIS; CANDIDA; CHEMISTRY; CYTOLOGY; ENZYME SPECIFICITY; GENETICS; METABOLIC ENGINEERING; METABOLISM; PROCEDURES;

ARABINOSE; BIOREACTORS; CANDIDA; CARBOXY-LYASES; L-LACTATE DEHYDROGENASE; LACTIC ACID; LIGNIN; METABOLIC ENGINEERING; SUBSTRATE SPECIFICITY; SUCCINATES; XYLOSE;

EID: 84939989460     PISSN: 13675435     EISSN: 14765535     Source Type: Journal    
DOI: 10.1007/s10295-015-1590-0     Document Type: Article

References (35)

1. Basso LR, Bartiss A, Mao Y et al (2010) Transformation of Candida albicans with a synthetic hygromycin B resistance gene. Yeast 27:1039–1048. doi:10.1002/yea.1813
2. Bettiga M, Bengtsson O, Hahn-Hägerdal B, Gorwa-Grauslund MF (2009) Arabinose and xylose fermentation by recombinant Saccharomyces cerevisiae expressing a fungal pentose utilization pathway. Microb Cell Fact 8:40. doi:10.1186/1475-2859-8-40
3. Bettiga M, Hahn-Hägerdal B, Gorwa-Grauslund MF (2008) Comparing the xylose reductase/xylitol dehydrogenase and xylose isomerase pathways in arabinose and xylose fermenting Saccharomyces cerevisiae strains. Biotechnol Biofuels 1:16. doi:10.1186/1754-6834-1-16
4. Blumhoff M, Steiger MG, Marx H et al (2013) Six novel constitutive promoters for metabolic engineering of Aspergillus niger. Appl Microbiol Biotechnol 97:259–267. doi:10.1007/s00253-012-4207-9
5. Branduardi P, Sauer M, De Gioia L et al (2006) Lactate production yield from engineered yeasts is dependent from the host background, the lactate dehydrogenase source and the lactate export. Microb Cell Fact 5:4. doi:10.1186/1475-2859-5-4
6. Brodeur G, Yau E, Badal K et al (2011) Chemical and physicochemical pretreatment of lignocellulosic biomass: a review. Enzyme Res 2011:787532. doi:10.4061/2011/787532
7. Delic M, Mattanovich D, Gasser B (2010) Monitoring intracellular redox conditions in the endoplasmic reticulum of living yeasts. FEMS Microbiol Lett 306:61–66. doi:10.1111/j.1574-6968.2010.01935.x
8. Fernandes S, Murray P (2010) Metabolic engineering for improved microbial pentose fermentation. Bioeng Bugs 1:424–428. doi:10.4161/bbug.1.6.12724
9. Hahn-Hägerdal B, Karhumaa K, Fonseca C et al (2007) Towards industrial pentose-fermenting yeast strains. Appl Microbiol Biotechnol 74:937–953. doi:10.1007/s00253-006-0827-2
10. Hara A, Ueda M, Misawa S et al (2000) A mutated hygromycin resistance gene is functional in the n-alkane-assimilating yeast Candida tropicalis. Arch Microbiol 173:187–192
11. Heer D, Sauer U (2008) Identification of furfural as a key toxin in lignocellulosic hydrolysates and evolution of a tolerant yeast strain. Microb Biotechnol 1:497–506. doi:10.1111/j.1751-7915.2008.00050.x
12. Ilmén M, Koivuranta K, Ruohonen L et al (2007) Efficient production of l-lactic acid from xylose by Pichia stipitis. Appl Environ Microbiol 73:117–123. doi:10.1128/AEM.01311-06
13. Kawaguchi Y, Honda H, Taniguchi-Morimura J, Iwasaki S (1989) The codon CUG is read as serine in an asporogenic yeast Candida cylindracea. Nature 341:164–166. doi:10.1038/341164a0
14. Klement T, Büchs J (2013) Itaconic acid—a biotechnological process in change. Bioresour Technol 135:422–431. doi:10.1016/j.biortech.2012.11.141
15. Kurtzman CP (2007) Eleven new species of Sugiyamaella and Candida from forest habitats. FEMS Yeast Res 7:1046–1063. doi:10.1111/j.1567-1364.2007.00224.x
16. Kurtzman CP, Fell JW, Boekhout T (2011) The Yeasts, a taxonomic study, 5th edn. Elsevier Science B.V, Amsterdam
17. Limtong S, Sumpradit T, Kitpreechavanich V et al (2000) Effect of acetic acid on growth and ethanol fermentation of xylose fermenting yeast and Saccharomyces cerevisiae. Kasetsart J Nat Sci 34:64–73
18. Liu ZL, Slininger PJ, Dien BS et al (2004) Adaptive response of yeasts to furfural and 5-hydroxymethylfurfural and new chemical evidence for HMF conversion to 2,5-bis-hydroxymethylfuran. J Ind Microbiol Biotechnol 31:345–352. doi:10.1007/s10295-004-0148-3
19. Modig T, Lidén G, Taherzadeh MJ (2002) Inhibition effects of furfural on alcohol dehydrogenase, aldehyde dehydrogenase and pyruvate dehydrogenase. Biochem J 363:769–776
20. Noda F, Hayashi K, Mizunuma T (1982) Influence of pH on inhibitory activity of acetic acid on osmophilic yeasts used in brine fermentation of soy sauce. Appl Environ Microbiol 43:245–246
21. Okabe M, Lies D, Kanamasa S, Park EY (2009) Biotechnological production of itaconic acid and its biosynthesis in Aspergillus terreus. Appl Microbiol Biotechnol 84:597–606. doi:10.1007/s00253-009-2132-3
22. Pesole G, Lotti M, Alberghina L, Saccone C (1995) Evolutionary origin of nonuniversal CUGSer codon in some Candida species as inferred from a molecular phylogeny. Genetics 141:903–907
23. Porro D, Bianchi MM, Brambilla L et al (1999) Replacement of a metabolic pathway for large-scale production of lactic acid from engineered yeasts. Appl Environ Microbiol 65:4211–4215
24. Porro D, Brambilla L, Ranzi BM et al (1995) Development of metabolically engineered Saccharomyces cerevisiae cells for the production of lactic acid. Biotechnol Prog 11:294–298. doi:10.1021/bp00033a009
25. Sambrook J, Russell D (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
26. Santos MA, Tuite MF (1995) The CUG codon is decoded in vivo as serine and not leucine in Candida albicans. Nucleic Acids Res 23:1481–1486
27. Sasano Y, Watanabe D, Ukibe K et al (2012) Overexpression of the yeast transcription activator Msn2 confers furfural resistance and increases the initial fermentation rate in ethanol production. J Biosci Bioeng 113:451–455. doi:10.1016/j.jbiosc.2011.11.017
28. Sauer M, Porro D, Mattanovich D, Branduardi P (2010) 16 years research on lactic acid production with yeast—ready for the market? Biotechnol Genet Eng Rev 27:229–256
29. Sousa MJ et al (2012) Cell metabolism—cell homeostasis and stress response. Intech. doi:10.5772/1081
30. Stadlmayr G, Mecklenbräuker A, Rothmüller M et al (2010) Identification and characterisation of novel Pichia pastoris promoters for heterologous protein production. J Biotechnol 150:519–529. doi:10.1016/j.jbiotec.2010.09.957
31. Toivola A, Yarrow D, van den Bosch E et al (1984) Alcoholic fermentation of d-xylose by yeasts. Appl Environ Microbiol 47:1221–1223
32. Urbina H, Frank R, Blackwell M (2013) Scheffersomyces cryptocercus: a new xylose-fermenting yeast associated with the gut of wood roaches and new combinations in the Sugiyamaella yeast clade. Mycologia 105:650–660. doi:10.3852/12-094
33. Werner S, Engler C, Weber E et al (2012) Fast track assembly of multigene constructs using golden gate cloning and the MoClo system. Bioeng Bugs 3:38–43. doi:10.4161/bbug.3.1.18223
34. Yehuda H, Droby S, Wisniewski M, Goldway M (2001) A transformation system for the biocontrol yeast, Candida oleophila, based on hygromycin B resistance. Curr Genet 40:282–287
35. Zhao XQ, Bai FW (2009) Mechanisms of yeast stress tolerance and its manipulation for efficient fuel ethanol production. J Biotechnol 144:23–30. doi:10.1016/j.jbiotec.2009.05.001