-
1
-
-
13444269543
-
Haploview: analysis and visualization of LD and haplotype maps
-
COI: 1:CAS:528:DC%2BD2MXkt1WitQ%3D%3D, PID: 15297300
-
Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21:263–265
-
(2005)
Bioinformatics
, vol.21
, pp. 263-265
-
-
Barrett, J.C.1
Fry, B.2
Maller, J.3
Daly, M.J.4
-
2
-
-
4544387440
-
A powerful strategy to account for multiple testing in the context of haplotype analysis
-
COI: 1:CAS:528:DC%2BD2cXnvFaktLY%3D, PID: 15290652
-
Becker T, Knapp M (2004) A powerful strategy to account for multiple testing in the context of haplotype analysis. Am J Hum Genet 75:561–570
-
(2004)
Am J Hum Genet
, vol.75
, pp. 561-570
-
-
Becker, T.1
Knapp, M.2
-
3
-
-
27644524213
-
Multiple testing in the context of haplotype analysis revisited: application to case-control data
-
COI: 1:CAS:528:DC%2BD2MXht1Cgu7bE, PID: 16266412
-
Becker T, Cichon S, Jonson E, Knapp M (2005a) Multiple testing in the context of haplotype analysis revisited: application to case-control data. Ann Hum Genet 69:747–756
-
(2005)
Ann Hum Genet
, vol.69
, pp. 747-756
-
-
Becker, T.1
Cichon, S.2
Jonson, E.3
Knapp, M.4
-
4
-
-
28344436260
-
Haplotype interaction analysis of unlinked regions
-
PID: 16240441
-
Becker T, Schumacher J, Cichon S, Baur MP, Knapp M (2005b) Haplotype interaction analysis of unlinked regions. Genet Epidemiol 29:313–322
-
(2005)
Genet Epidemiol
, vol.29
, pp. 313-322
-
-
Becker, T.1
Schumacher, J.2
Cichon, S.3
Baur, M.P.4
Knapp, M.5
-
5
-
-
22844445950
-
LMP7/TAP2 gene polymorphisms and HPV infection in esophageal carcinoma patients from a high incidence area in China
-
COI: 1:CAS:528:DC%2BD2MXmsVegs7c%3D, PID: 15774487
-
Cao B, Tian X, Li Y, Jiang P, Ning T, Xing H, Zhao Y, Zhang C, Shi X, Chen D, Shen Y, Ke Y (2005) LMP7/TAP2 gene polymorphisms and HPV infection in esophageal carcinoma patients from a high incidence area in China. Carcinogenesis 26:1280–1284
-
(2005)
Carcinogenesis
, vol.26
, pp. 1280-1284
-
-
Cao, B.1
Tian, X.2
Li, Y.3
Jiang, P.4
Ning, T.5
Xing, H.6
Zhao, Y.7
Zhang, C.8
Shi, X.9
Chen, D.10
Shen, Y.11
Ke, Y.12
-
6
-
-
33751536158
-
Immune selective pressure and HLA class I antigen defects in malignant lesions
-
COI: 1:CAS:528:DC%2BD28Xht1Gnu7vE, PID: 16783578
-
Chang CC, Ferrone S (2007) Immune selective pressure and HLA class I antigen defects in malignant lesions. Cancer Immunol Immunother 56:227–236
-
(2007)
Cancer Immunol Immunother
, vol.56
, pp. 227-236
-
-
Chang, C.C.1
Ferrone, S.2
-
7
-
-
27944488682
-
Genetic characterization of four Austronesian-speaking populations
-
PID: 16208426
-
Chow RA, Caeiro JL, Chen SJ, Garcia-Bertrand RL, Herrera RJ (2005) Genetic characterization of four Austronesian-speaking populations. J Hum Genet 50:550–559
-
(2005)
J Hum Genet
, vol.50
, pp. 550-559
-
-
Chow, R.A.1
Caeiro, J.L.2
Chen, S.J.3
Garcia-Bertrand, R.L.4
Herrera, R.J.5
-
8
-
-
28544444135
-
Human leukocyte antigen and antigen processing machinery component defects in astrocytic tumors
-
COI: 1:CAS:528:DC%2BD2MXht1KjsrjL, PID: 16322289
-
Facoetti A, Nano R, Zelini P, Morbini P, Benericetti E, Ceroni M, Campoli M, Ferrone S (2005) Human leukocyte antigen and antigen processing machinery component defects in astrocytic tumors. Clin Cancer Res 11:8304–8311
-
(2005)
Clin Cancer Res
, vol.11
, pp. 8304-8311
-
-
Facoetti, A.1
Nano, R.2
Zelini, P.3
Morbini, P.4
Benericetti, E.5
Ceroni, M.6
Campoli, M.7
Ferrone, S.8
-
9
-
-
0036882073
-
The final cut: how ERAP1 trims MHC ligands to size
-
COI: 1:CAS:528:DC%2BD38XovFChsLs%3D, PID: 12447365
-
Falk K, Rotzschke O (2002) The final cut: how ERAP1 trims MHC ligands to size. Nat Immunol 3:1121–1122
-
(2002)
Nat Immunol
, vol.3
, pp. 1121-1122
-
-
Falk, K.1
Rotzschke, O.2
-
10
-
-
29244461714
-
The aminopeptidase ERAAP shapes the peptide repertoire displayed by major histocompatibility complex class I molecules
-
COI: 1:CAS:528:DC%2BD2MXhtlSqu7rM, PID: 16299505
-
Hammer GE, Gonzalez F, Champsaur M, Cado D, Shastri N (2006) The aminopeptidase ERAAP shapes the peptide repertoire displayed by major histocompatibility complex class I molecules. Nat Immunol 7:103–112
-
(2006)
Nat Immunol
, vol.7
, pp. 103-112
-
-
Hammer, G.E.1
Gonzalez, F.2
Champsaur, M.3
Cado, D.4
Shastri, N.5
-
11
-
-
0034951968
-
A heuristic approach to the formulas for population attributable fraction
-
COI: 1:STN:280:DC%2BD3MzkvFOqtQ%3D%3D, PID: 11413183
-
Hanley JA (2001) A heuristic approach to the formulas for population attributable fraction. J Epidemiol Community Health 55:508–514
-
(2001)
J Epidemiol Community Health
, vol.55
, pp. 508-514
-
-
Hanley, J.A.1
-
12
-
-
0029001515
-
Generation, translocation, and presentation of MHC class I-restricted peptides
-
COI: 1:CAS:528:DyaK2MXmsl2qsbY%3D, PID: 7574490
-
Heemels MT, Ploegh H (1995) Generation, translocation, and presentation of MHC class I-restricted peptides. Annu Rev Biochem 64:463–491
-
(1995)
Annu Rev Biochem
, vol.64
, pp. 463-491
-
-
Heemels, M.T.1
Ploegh, H.2
-
13
-
-
78649897310
-
Automated extraction of DNA and RNA from a single formalin-fixed paraffin-embedded tissue section for analysis of both single-nucleotide polymorphisms and mRNA expression
-
COI: 1:CAS:528:DC%2BC3cXhsF2js7zN, PID: 20947696
-
Hennig G, Gehrmann M, Stropp U, Brauch H, Fritz P, Eichelbaum M, Schwab M, Schroth W (2010) Automated extraction of DNA and RNA from a single formalin-fixed paraffin-embedded tissue section for analysis of both single-nucleotide polymorphisms and mRNA expression. Clin Chem 56:1845–1853
-
(2010)
Clin Chem
, vol.56
, pp. 1845-1853
-
-
Hennig, G.1
Gehrmann, M.2
Stropp, U.3
Brauch, H.4
Fritz, P.5
Eichelbaum, M.6
Schwab, M.7
Schroth, W.8
-
14
-
-
84875615600
-
Antigen processing and presentation: evolution from a bird's eye view
-
COI: 1:CAS:528:DC%2BC38XhslWrsbnN, PID: 23182425
-
Kaufman J (2013) Antigen processing and presentation: evolution from a bird's eye view. Mol Immunol 55:159–161
-
(2013)
Mol Immunol
, vol.55
, pp. 159-161
-
-
Kaufman, J.1
-
15
-
-
0033006003
-
Allelic discrimination using fluorogenic probes and the 5' nuclease assay
-
COI: 1:CAS:528:DyaK1MXhvVylsbo%3D, PID: 10084106
-
Livak KJ (1999) Allelic discrimination using fluorogenic probes and the 5' nuclease assay. Genet Anal 14:143–149
-
(1999)
Genet Anal
, vol.14
, pp. 143-149
-
-
Livak, K.J.1
-
16
-
-
34247529384
-
Genetic variation of antigen processing machinery components and association with cervical carcinoma
-
COI: 1:CAS:528:DC%2BD2sXkslGhtr8%3D, PID: 17366619
-
Mehta AM, Jordanova ES, van Wezel T, Uh HW, Corver WE, Kwappenberg KM, Verduijn W, Kenter GG, van der Burg SH, Fleuren GJ (2007) Genetic variation of antigen processing machinery components and association with cervical carcinoma. Genes Chromosom Cancer 46:577–586
-
(2007)
Genes Chromosom Cancer
, vol.46
, pp. 577-586
-
-
Mehta, A.M.1
Jordanova, E.S.2
van Wezel, T.3
Uh, H.W.4
Corver, W.E.5
Kwappenberg, K.M.6
Verduijn, W.7
Kenter, G.G.8
van der Burg, S.H.9
Fleuren, G.J.10
-
17
-
-
36349025846
-
Association of antigen processing machinery and HLA class I defects with clinicopathological outcome in cervical carcinoma
-
COI: 1:CAS:528:DC%2BD2sXhtlaqt7vK, PID: 17622526
-
Mehta AM, Jordanova ES, Kenter GG, Ferrone S, Fleuren GJ (2008) Association of antigen processing machinery and HLA class I defects with clinicopathological outcome in cervical carcinoma. Cancer Immunol Immunother 57:197–206
-
(2008)
Cancer Immunol Immunother
, vol.57
, pp. 197-206
-
-
Mehta, A.M.1
Jordanova, E.S.2
Kenter, G.G.3
Ferrone, S.4
Fleuren, G.J.5
-
18
-
-
65349123542
-
Single nucleotide polymorphisms in antigen processing machinery component ERAP1 significantly associate with clinical outcome in cervical carcinoma
-
COI: 1:CAS:528:DC%2BD1MXktVaitLc%3D, PID: 19202550
-
Mehta AM, Jordanova ES, Corver WE, van Wezel T, Uh HW, Kenter GG, Fleuren GJ (2009) Single nucleotide polymorphisms in antigen processing machinery component ERAP1 significantly associate with clinical outcome in cervical carcinoma. Genes Chromosom Cancer 48:410–418
-
(2009)
Genes Chromosom Cancer
, vol.48
, pp. 410-418
-
-
Mehta, A.M.1
Jordanova, E.S.2
Corver, W.E.3
van Wezel, T.4
Uh, H.W.5
Kenter, G.G.6
Fleuren, G.J.7
-
19
-
-
17644413210
-
Defects in the human leukocyte antigen class I antigen processing machinery in head and neck squamous cell carcinoma: association with clinical outcome
-
COI: 1:CAS:528:DC%2BD2MXivFKisro%3D, PID: 15814633
-
Meissner M, Reichert TE, Kunkel M, Gooding W, Whiteside TL, Ferrone S, Seliger B (2005) Defects in the human leukocyte antigen class I antigen processing machinery in head and neck squamous cell carcinoma: association with clinical outcome. Clin Cancer Res 11:2552–2560
-
(2005)
Clin Cancer Res
, vol.11
, pp. 2552-2560
-
-
Meissner, M.1
Reichert, T.E.2
Kunkel, M.3
Gooding, W.4
Whiteside, T.L.5
Ferrone, S.6
Seliger, B.7
-
20
-
-
0016288477
-
Proportion of disease caused or prevented by a given exposure, trait or intervention
-
COI: 1:STN:280:DyaE2c7lsVemuw%3D%3D, PID: 4825599
-
Miettinen OS (1974) Proportion of disease caused or prevented by a given exposure, trait or intervention. Am J Epidemiol 99:325–332
-
(1974)
Am J Epidemiol
, vol.99
, pp. 325-332
-
-
Miettinen, O.S.1
-
21
-
-
0036902105
-
An IFN-gamma-induced aminopeptidase in the ER, ERAP1, trims precursors to MHC class I-presented peptides
-
COI: 1:CAS:528:DC%2BD38XovFChsbc%3D, PID: 12436109
-
Saric T, Chang SC, Hattori A, York IA, Markant S, Rock KL, Tsujimoto M, Goldberg AL (2002) An IFN-gamma-induced aminopeptidase in the ER, ERAP1, trims precursors to MHC class I-presented peptides. Nat Immunol 3:1169–1176
-
(2002)
Nat Immunol
, vol.3
, pp. 1169-1176
-
-
Saric, T.1
Chang, S.C.2
Hattori, A.3
York, I.A.4
Markant, S.5
Rock, K.L.6
Tsujimoto, M.7
Goldberg, A.L.8
-
22
-
-
0031466983
-
From genotypes to genes: doubling the sample size
-
COI: 1:STN:280:DyaK1c%2FosFagsw%3D%3D, PID: 9423247
-
Sasieni PD (1997) From genotypes to genes: doubling the sample size. Biometrics 53:1253–1261
-
(1997)
Biometrics
, vol.53
, pp. 1253-1261
-
-
Sasieni, P.D.1
-
23
-
-
22144442460
-
Concerted peptide trimming by human ERAP1 and ERAP2 aminopeptidase complexes in the endoplasmic reticulum
-
COI: 1:CAS:528:DC%2BD2MXltlynsro%3D, PID: 15908954
-
Saveanu L, Carroll O, Lindo V, Del Val M, Lopez D, Lepelletier Y, Greer F, Schomburg L, Fruci D, Niedermann G, van Endert PM (2005) Concerted peptide trimming by human ERAP1 and ERAP2 aminopeptidase complexes in the endoplasmic reticulum. Nat Immunol 6:689–697
-
(2005)
Nat Immunol
, vol.6
, pp. 689-697
-
-
Saveanu, L.1
Carroll, O.2
Lindo, V.3
Del Val, M.4
Lopez, D.5
Lepelletier, Y.6
Greer, F.7
Schomburg, L.8
Fruci, D.9
Niedermann, G.10
van Endert, P.M.11
-
24
-
-
27944434228
-
Molecular mechanisms of HLA class I antigen abnormalities following viral infection and transformation
-
COI: 1:CAS:528:DC%2BD2MXht1KgsrrN, PID: 16003759
-
Seliger B, Ritz U, Ferrone S (2006) Molecular mechanisms of HLA class I antigen abnormalities following viral infection and transformation. Int J Cancer 118:129–138
-
(2006)
Int J Cancer
, vol.118
, pp. 129-138
-
-
Seliger, B.1
Ritz, U.2
Ferrone, S.3
-
25
-
-
33646550519
-
Autosomal STR variation in five Austronesian populations
-
COI: 1:STN:280:DC%2BD283os1ersw%3D%3D, PID: 16715840
-
Shepard EM, Chow RA, Suafo'a E, Addison D, Perez-Miranda AM, Garcia-Bertrand RL, Herrera RJ (2005) Autosomal STR variation in five Austronesian populations. Hum Biol 77:825–851
-
(2005)
Hum Biol
, vol.77
, pp. 825-851
-
-
Shepard, E.M.1
Chow, R.A.2
Suafo'a, E.3
Addison, D.4
Perez-Miranda, A.M.5
Garcia-Bertrand, R.L.6
Herrera, R.J.7
-
26
-
-
46349088823
-
Prevalence of human papillomavirus in Indonesia: a population-based study in three regions
-
COI: 1:STN:280:DC%2BD1cvjslWqug%3D%3D, PID: 18609756
-
Vet JN, de Boer MA, van den Akker BE, Siregar B, Lisnawati, Budiningsih S, Tyasmorowati D, Moestikaningsih, Cornain S, Peters AA, Fleuren GJ (2008) Prevalence of human papillomavirus in Indonesia: a population-based study in three regions. Br J Cancer 99:214–218
-
(2008)
Br J Cancer
, vol.99
, pp. 214-218
-
-
Vet, J.N.1
de Boer, M.A.2
van den Akker, B.E.3
Siregar, B.4
Lisnawati5
Budiningsih, S.6
Tyasmorowati, D.7
Moestikaningsih8
Cornain, S.9
Peters, A.A.10
Fleuren, G.J.11
-
27
-
-
33645089946
-
In vivo role of ER-associated peptidase activity in tailoring peptides for presentation by MHC class Ia and class Ib molecules
-
COI: 1:CAS:528:DC%2BD28XjsVSqtbc%3D, PID: 16505142
-
Yan J, Parekh VV, Mendez-Fernandez Y, Olivares-Villagomez D, Dragovic S, Hill T, Roopenian DC, Joyce S, Van Kaer L (2006) In vivo role of ER-associated peptidase activity in tailoring peptides for presentation by MHC class Ia and class Ib molecules. J Exp Med 203:647–659
-
(2006)
J Exp Med
, vol.203
, pp. 647-659
-
-
Yan, J.1
Parekh, V.V.2
Mendez-Fernandez, Y.3
Olivares-Villagomez, D.4
Dragovic, S.5
Hill, T.6
Roopenian, D.C.7
Joyce, S.8
Van Kaer, L.9
-
28
-
-
0036884090
-
The ER aminopeptidase ERAP1 enhances or limits antigen presentation by trimming epitopes to 8-9 residues
-
COI: 1:CAS:528:DC%2BD38XovFChtr4%3D, PID: 12436110
-
York IA, Chang SC, Saric T, Keys JA, Favreau JM, Goldberg AL, Rock KL (2002) The ER aminopeptidase ERAP1 enhances or limits antigen presentation by trimming epitopes to 8-9 residues. Nat Immunol 3:1177–1184
-
(2002)
Nat Immunol
, vol.3
, pp. 1177-1184
-
-
York, I.A.1
Chang, S.C.2
Saric, T.3
Keys, J.A.4
Favreau, J.M.5
Goldberg, A.L.6
Rock, K.L.7
-
29
-
-
33745125912
-
Endoplasmic reticulum aminopeptidase 1 (ERAP1) trims MHC class I-presented peptides in vivo and plays an important role in immunodominance
-
York IA, Brehm MA, Zendzian S, Towne CF, Rock KL (2006) Endoplasmic reticulum aminopeptidase 1 (ERAP1) trims MHC class I-presented peptides in vivo and plays an important role in immunodominance. Proc Natl Acad Sci USA 103:9202–9207
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 9202-9207
-
-
York, I.A.1
Brehm, M.A.2
Zendzian, S.3
Towne, C.F.4
Rock, K.L.5
|