메뉴 건너뛰기




Volumn 34, Issue 3, 2014, Pages 845-854

Extended metAFLP approach in studies of tissue culture induced variation (TCIV) in triticale

Author keywords

(Epi)genetics; Extended metAFLP; Tissue culture induced variation; Triticale

Indexed keywords

ALKYLATION; METHYLATION; TISSUE; TISSUE REGENERATION;

EID: 84939892831     PISSN: 13803743     EISSN: 15729788     Source Type: Journal    
DOI: 10.1007/s11032-014-0079-2     Document Type: Article
Times cited : (34)

References (34)
  • 1
    • 84862162719 scopus 로고    scopus 로고
    • Morphological and genetic distinctiveness of metallicolous and non-metallicolous populations of Armeria maritima s.l. (Plumbaginaceae) in Poland
    • PID: 22243547, COI: 1:STN:280:DC%2BC38vgtlGitw%3D%3D
    • Abratowska A, Wąsowicz P, Bednarek PT, Telka J, Wierzbicka M (2012) Morphological and genetic distinctiveness of metallicolous and non-metallicolous populations of Armeria maritima s.l. (Plumbaginaceae) in Poland. Plant Biol 14(4):586–595. doi:10.1111/j.1438-8677.2011.00536.x
    • (2012) Plant Biol , vol.14 , Issue.4 , pp. 586-595
    • Abratowska, A.1    Wąsowicz, P.2    Bednarek, P.T.3    Telka, J.4    Wierzbicka, M.5
  • 2
    • 0032422025 scopus 로고    scopus 로고
    • Inter simple sequence repeat polymerase chain reaction for the detection of somaclonal variation
    • Alhani MC, Wilkinson MJ (1998) Inter simple sequence repeat polymerase chain reaction for the detection of somaclonal variation. Plant Breed 117(6):573–575. doi:10.1111/j.1439-0523.1998.tb02210.x
    • (1998) Plant Breed , vol.117 , Issue.6 , pp. 573-575
    • Alhani, M.C.1    Wilkinson, M.J.2
  • 3
    • 0013632833 scopus 로고
    • Structural variation in the heterochromatin of rye chromosomes in triticales
    • PID: 24270822, COI: 1:STN:280:DC%2BC2c3gsVWqtQ%3D%3D
    • Appels R, Gustafson JP, May CE (1982) Structural variation in the heterochromatin of rye chromosomes in triticales. Theor Appl Genet 63(3):235–244. doi:10.1007/BF00304002
    • (1982) Theor Appl Genet , vol.63 , Issue.3 , pp. 235-244
    • Appels, R.1    Gustafson, J.P.2    May, C.E.3
  • 4
    • 0036423955 scopus 로고    scopus 로고
    • Morphology, cytology and BSA based testing on limited segregation population AFLPs
    • COI: 1:CAS:528:DC%2BD38XpsVCisbk%3D
    • Bednarek PT, Kubicka H, Zawada M (2002) Morphology, cytology and BSA based testing on limited segregation population AFLPs. Cell Mol Biol Let 7:635–648
    • (2002) Cell Mol Biol Let , vol.7 , pp. 635-648
    • Bednarek, P.T.1    Kubicka, H.2    Zawada, M.3
  • 5
    • 33847794180 scopus 로고    scopus 로고
    • Quantification of the tissue-culture induced variation in barley (Hordeum vulgare L.)
    • PID: 17335560
    • Bednarek PT, Orłowska R, Koebner RMD, Zimny J (2007) Quantification of the tissue-culture induced variation in barley (Hordeum vulgare L.). BMC Plant Biol 7:10. doi:10.1186/1471-2229-7-10
    • (2007) BMC Plant Biol , vol.7 , pp. 10
    • Bednarek, P.T.1    Orłowska, R.2    Koebner, R.M.D.3    Zimny, J.4
  • 6
    • 38849170365 scopus 로고    scopus 로고
    • Polyploidization as a retraction force in plant genome evolution: sequence rearrangements in triticale
    • PID: 18167561
    • Bento M, Pereira HS, Rocheta M, Gustafson P, Viegas W, Silva M (2008) Polyploidization as a retraction force in plant genome evolution: sequence rearrangements in triticale. PLoS ONE 3(1):e1402. doi:10.1371/journal.pone.0001402
    • (2008) PLoS ONE , vol.3 , Issue.1 , pp. e1402
    • Bento, M.1    Pereira, H.S.2    Rocheta, M.3    Gustafson, P.4    Viegas, W.5    Silva, M.6
  • 7
    • 0000134749 scopus 로고
    • Origin of aneuploid plants obtained by anther culture in triticale
    • Charmet G, Bernard S, Bernard M (1986) Origin of aneuploid plants obtained by anther culture in triticale. Can J Genet Cytol 28(3):444–452
    • (1986) Can J Genet Cytol , vol.28 , Issue.3 , pp. 444-452
    • Charmet, G.1    Bernard, S.2    Bernard, M.3
  • 8
    • 34247399015 scopus 로고    scopus 로고
    • Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
    • PID: 17273870, COI: 1:CAS:528:DC%2BD2sXksVarsbw%3D
    • Choi CS, Sano H (2007) Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol Genet Genomics 277(5):589–600. doi:10.1007/s00438-007-0209-1
    • (2007) Mol Genet Genomics , vol.277 , Issue.5 , pp. 589-600
    • Choi, C.S.1    Sano, H.2
  • 9
    • 84859534890 scopus 로고    scopus 로고
    • Genetic and epigenetic variation in a cosmopolitan grass Poa annua from Antarctic and Polish populations
    • Chwedorzewska KJ, Bednarek PT (2012) Genetic and epigenetic variation in a cosmopolitan grass Poa annua from Antarctic and Polish populations. Polish Polar Res 33:63–80. doi:10.2478/v10183-012-0004-5
    • (2012) Polish Polar Res , vol.33 , pp. 63-80
    • Chwedorzewska, K.J.1    Bednarek, P.T.2
  • 10
    • 79952697139 scopus 로고    scopus 로고
    • Comparative assessment of genetic and epigenetic variation among regenerants of potato (Solanum tuberosum) derived from long-term nodal tissue-culture and cell selection
    • PID: 21210276, COI: 1:CAS:528:DC%2BC3MXjtFagt7c%3D
    • Dann AL, Wilson CR (2011) Comparative assessment of genetic and epigenetic variation among regenerants of potato (Solanum tuberosum) derived from long-term nodal tissue-culture and cell selection. Plant Cell Rep 30:631–639. doi:10.1007/s00299-010-0983-9
    • (2011) Plant Cell Rep , vol.30 , pp. 631-639
    • Dann, A.L.1    Wilson, C.R.2
  • 11
    • 84880577454 scopus 로고    scopus 로고
    • DNA methylation alterations of upland cotton (Gossypium hirsutum) in response to cold stress
    • COI: 1:CAS:528:DC%2BC2cXpt1Omsg%3D%3D
    • Fan H, Wei J, Li T, Li Z, Guo N, Cai Y, Lin Y (2013) DNA methylation alterations of upland cotton (Gossypium hirsutum) in response to cold stress. Acta Physiol Plant 35(8):2445–2453. doi:10.1007/s11738-013-1278-x
    • (2013) Acta Physiol Plant , vol.35 , Issue.8 , pp. 2445-2453
    • Fan, H.1    Wei, J.2    Li, T.3    Li, Z.4    Guo, N.5    Cai, Y.6    Lin, Y.7
  • 12
    • 77952092141 scopus 로고    scopus 로고
    • Flow cytometry, HPLC-RP, and metAFLP analyses to assess genetic variability in somatic embryo-derived plantlets of Gentiana pannonica Scop
    • COI: 1:CAS:528:DC%2BC3cXmsVGqu7o%3D
    • Fiuk A, Bednarek P, Rybczyński J (2010) Flow cytometry, HPLC-RP, and metAFLP analyses to assess genetic variability in somatic embryo-derived plantlets of Gentiana pannonica Scop. Plant Mol Biol Rep 28(3):413–420. doi:10.1007/s11105-009-0167-3
    • (2010) Plant Mol Biol Rep , vol.28 , Issue.3 , pp. 413-420
    • Fiuk, A.1    Bednarek, P.2    Rybczyński, J.3
  • 13
    • 0036668181 scopus 로고    scopus 로고
    • Genomic DNA methylation-demethylation during aging and reinvigoration of Pinus radiata
    • PID: 12184986, COI: 1:CAS:528:DC%2BD38Xmt12ls7w%3D
    • Fraga MF, Rodriguez R, Canal MJ (2002) Genomic DNA methylation-demethylation during aging and reinvigoration of Pinus radiata. Tree Physiol 22(11):813–816
    • (2002) Tree Physiol , vol.22 , Issue.11 , pp. 813-816
    • Fraga, M.F.1    Rodriguez, R.2    Canal, M.J.3
  • 14
    • 1942520183 scopus 로고    scopus 로고
    • Search for methylation-sensitive amplification polymorphisms associated with the “mantled” variant phenotype in oil palm (Elaeis guineensis Jacq.)
    • PID: 15060619, COI: 1:CAS:528:DC%2BD2cXivFGqtrw%3D
    • Jaligot E, Beule T, Baurens F-C, Billotte N, Rival A (2004) Search for methylation-sensitive amplification polymorphisms associated with the “mantled” variant phenotype in oil palm (Elaeis guineensis Jacq.). Genome 47:224–228
    • (2004) Genome , vol.47 , pp. 224-228
    • Jaligot, E.1    Beule, T.2    Baurens, F.-C.3    Billotte, N.4    Rival, A.5
  • 15
    • 0027430010 scopus 로고
    • Tissue culture-induced DNA methylation variation in maize
    • PID: 8415605, COI: 1:CAS:528:DyaK3sXmt1Wku7w%3D
    • Kaeppler SM, Phillips RL (1993) Tissue culture-induced DNA methylation variation in maize. Proc Natl Acad Sci USA 90(19):8773–8776
    • (1993) Proc Natl Acad Sci USA , vol.90 , Issue.19 , pp. 8773-8776
    • Kaeppler, S.M.1    Phillips, R.L.2
  • 16
    • 0036889244 scopus 로고    scopus 로고
    • Non-Mendelian phenomena in allopolyploid genome evolution
    • COI: 1:CAS:528:DC%2BD38Xos1Gjsr0%3D
    • Liu B, Wendel F (2002) Non-Mendelian phenomena in allopolyploid genome evolution. Curr Genomics 3:489–505
    • (2002) Curr Genomics , vol.3 , pp. 489-505
    • Liu, B.1    Wendel, F.2
  • 17
    • 3142718393 scopus 로고    scopus 로고
    • Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions
    • PID: 15071728, COI: 1:CAS:528:DC%2BD2cXkslKns7o%3D
    • Liu ZL, Han FP, Tan M, Shan XH, Dong YZ, Wang XZ, Fedak G, Hao S, Liu B (2004) Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions. Theor Appl Genet 109(1):200–209. doi:10.1007/s00122-004-1618-8
    • (2004) Theor Appl Genet , vol.109 , Issue.1 , pp. 200-209
    • Liu, Z.L.1    Han, F.P.2    Tan, M.3    Shan, X.H.4    Dong, Y.Z.5    Wang, X.Z.6    Fedak, G.7    Hao, S.8    Liu, B.9
  • 18
    • 84862955005 scopus 로고    scopus 로고
    • A comparison on DNA methylation levels in bamboo at five developmental stages
    • COI: 1:CAS:528:DC%2BC38XhtVGksr0%3D
    • Lu Y-q, Wang D-m, Li H-y, Jia Q, Wu Z, Lu W-f (2012) A comparison on DNA methylation levels in bamboo at five developmental stages. J For Res 23(1):157–159. doi:10.1007/s11676-012-0247-3
    • (2012) J For Res , vol.23 , Issue.1 , pp. 157-159
    • Lu, Y.-Q.1    Wang, D.-M.2    Li, H.-Y.3    Jia, Q.4    Wu, Z.5    Lu, W.-F.6
  • 19
    • 0034965348 scopus 로고    scopus 로고
    • Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes
    • COI: 1:CAS:528:DC%2BD3MXlt1Skurg%3D
    • Matthes M, Singh R, Cheah S-C, Karp A (2001) Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes. Theor Appl Genet 102:971–979. doi:10.1007/s001220000491
    • (2001) Theor Appl Genet , vol.102 , pp. 971-979
    • Matthes, M.1    Singh, R.2    Cheah, S.-C.3    Karp, A.4
  • 20
    • 79960541784 scopus 로고    scopus 로고
    • An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond
    • PID: 21617249, COI: 1:CAS:528:DC%2BC3MXptFGjsL8%3D
    • Miguel C, Marum L (2011) An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond. J Exp Bot 62:3713–3725. doi:10.1093/jxb/err155
    • (2011) J Exp Bot , vol.62 , pp. 3713-3725
    • Miguel, C.1    Marum, L.2
  • 21
    • 79952694945 scopus 로고    scopus 로고
    • Cryopreservation enhances embryogenic capacity of Gentiana cruciata (L.) suspension culture and maintains (epi)genetic uniformity of regenerants
    • PID: 21161232
    • Mikuła A, Tomiczak K, Rybczyński JJ (2011) Cryopreservation enhances embryogenic capacity of Gentiana cruciata (L.) suspension culture and maintains (epi)genetic uniformity of regenerants. Plant Cell Rep 30:565–574. doi:10.1007/s00299-010-0970-1
    • (2011) Plant Cell Rep , vol.30 , pp. 565-574
    • Mikuła, A.1    Tomiczak, K.2    Rybczyński, J.J.3
  • 22
    • 84982358134 scopus 로고
    • A revised medium for rapid growth and bio assays with tobacco tissue cultures
    • COI: 1:CAS:528:DyaF3sXksFKm
    • Murashige T, Skoog F (1962) A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol Plant 15(3):473–497. doi:10.1111/j.1399-3054.1962.tb08052.x
    • (1962) Physiol Plant , vol.15 , Issue.3 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 23
    • 84858295560 scopus 로고    scopus 로고
    • Recent progress in the understanding of tissue culture-induced genome level changes in plants and potential applications
    • PID: 22179259, COI: 1:CAS:528:DC%2BC38Xjsleitbo%3D
    • Neelakandan AK, Wang K (2012) Recent progress in the understanding of tissue culture-induced genome level changes in plants and potential applications. Plant Cell Rep 31:597–620. doi:10.1007/s00299-011-1202-z
    • (2012) Plant Cell Rep , vol.31 , pp. 597-620
    • Neelakandan, A.K.1    Wang, K.2
  • 24
    • 68349154098 scopus 로고    scopus 로고
    • Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice
    • Ngezahayo F, Xu C, Wang H, Jiang L, Pang J, Liu B (2009) Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice. BMC Plant Biol 9(91). doi:10.1186/1471-2229-9-91
    • (2009) BMC Plant Biol , vol.9 , Issue.91
    • Ngezahayo, F.1    Xu, C.2    Wang, H.3    Jiang, L.4    Pang, J.5    Liu, B.6
  • 25
    • 3242697088 scopus 로고    scopus 로고
    • Direct embryogenesis and green plant regeneration from isolated microspores of hexaploid triticale (×Triticosecale Wittmack) cv. Bogo
    • PID: 15108018, COI: 1:CAS:528:DC%2BD2cXlt1ymu7k%3D
    • Oleszczuk S, Sowa S, Zimny J (2004) Direct embryogenesis and green plant regeneration from isolated microspores of hexaploid triticale (×Triticosecale Wittmack) cv. Bogo. Plant Cell Rep 22(12):885–893. doi:10.1007/s00299-004-0796-9
    • (2004) Plant Cell Rep , vol.22 , Issue.12 , pp. 885-893
    • Oleszczuk, S.1    Sowa, S.2    Zimny, J.3
  • 26
    • 79952706134 scopus 로고    scopus 로고
    • Aneuploidy among androgenic progeny of hexaploid triticale (XTriticosecale Wittmack)
    • PID: 21170716, COI: 1:CAS:528:DC%2BC3MXjtFagt7s%3D
    • Oleszczuk S, Rabiza-Swider J, Zimny J, Lukaszewski A (2011) Aneuploidy among androgenic progeny of hexaploid triticale (XTriticosecale Wittmack). Plant Cell Rep 30(4):575–586. doi:10.1007/s00299-010-0971-0
    • (2011) Plant Cell Rep , vol.30 , Issue.4 , pp. 575-586
    • Oleszczuk, S.1    Rabiza-Swider, J.2    Zimny, J.3    Lukaszewski, A.4
  • 27
    • 0034822969 scopus 로고    scopus 로고
    • Effect of in vitro shoot multiplication and somatic embryogenesis on 5-methylcytosine content in DNA of Myrtus communis L
    • COI: 1:CAS:528:DC%2BD3MXnsVems7s%3D
    • Parra R, Pastor MT, Pérez-Payá E, Amo-Marco JB (2001) Effect of in vitro shoot multiplication and somatic embryogenesis on 5-methylcytosine content in DNA of Myrtus communis L. Plant Growth Regul 33(2):131–136. doi:10.1023/A:1017571911028
    • (2001) Plant Growth Regul , vol.33 , Issue.2 , pp. 131-136
    • Parra, R.1    Pastor, M.T.2    Pérez-Payá, E.3    Amo-Marco, J.B.4
  • 28
    • 67349154944 scopus 로고    scopus 로고
    • Epigenetic changes detected in micropropagated hop plants
    • PID: 19285752, COI: 1:CAS:528:DC%2BD1MXnslGgsro%3D
    • Peredo EL, Arroyo-García R, Revilla MÁ (2009) Epigenetic changes detected in micropropagated hop plants. J Plant Physiol 166(10):1101–1111. doi:10.1016/j.jplph.2008.12.015
    • (2009) J Plant Physiol , vol.166 , Issue.10 , pp. 1101-1111
    • Peredo, E.L.1    Arroyo-García, R.2    Revilla, M.Á.3
  • 29
    • 84876326161 scopus 로고    scopus 로고
    • MSAP: a tool for the statistical analysis of methylation-sensitive amplified polymorphism data
    • PID: 23311622
    • Pérez-Figueroa A (2013) MSAP: a tool for the statistical analysis of methylation-sensitive amplified polymorphism data. Mol Ecol Resour 13(3):522–527. doi:10.1111/1755-0998.12064
    • (2013) Mol Ecol Resour , vol.13 , Issue.3 , pp. 522-527
    • Pérez-Figueroa, A.1
  • 30
    • 0030665357 scopus 로고    scopus 로고
    • Estimating alfalfa somaclonal variation in axillary branching propagation and indirect somatic embryogenesis by RAPD fingerprinting
    • COI: 1:CAS:528:DyaK2sXnsVygsr0%3D
    • Piccioni E, Barcaccia G, Falcinelli M, Standardi A (1997) Estimating alfalfa somaclonal variation in axillary branching propagation and indirect somatic embryogenesis by RAPD fingerprinting. Int J Plant Sci 158(5):556–562
    • (1997) Int J Plant Sci , vol.158 , Issue.5 , pp. 556-562
    • Piccioni, E.1    Barcaccia, G.2    Falcinelli, M.3    Standardi, A.4
  • 31
    • 54349096987 scopus 로고    scopus 로고
    • Somaclonal variation in rye (Secale cereale L.) analyzed using polymorphic and sequenced AFLP markers
    • Puente R, González A, Ruiz M, Polanco C (2008) Somaclonal variation in rye (Secale cereale L.) analyzed using polymorphic and sequenced AFLP markers. In Vitro Cell Dev Biol Plant 44(5):419–426. doi:10.1007/s11627-008-9152-z
    • (2008) In Vitro Cell Dev Biol Plant , vol.44 , Issue.5 , pp. 419-426
    • Puente, R.1    González, A.2    Ruiz, M.3    Polanco, C.4
  • 32
    • 84879379737 scopus 로고    scopus 로고
    • Scoring and analysis of methylation-sensitive amplification polymorphisms for epigenetic population studies
    • PID: 23617735, COI: 1:CAS:528:DC%2BC3sXpvVaqtLw%3D
    • Schulz B, Eckstein RL, Durka W (2013) Scoring and analysis of methylation-sensitive amplification polymorphisms for epigenetic population studies. Mol Ecol Resour 13(4):642–653. doi:10.1111/1755-0998.12100
    • (2013) Mol Ecol Resour , vol.13 , Issue.4 , pp. 642-653
    • Schulz, B.1    Eckstein, R.L.2    Durka, W.3
  • 33
    • 45849128998 scopus 로고    scopus 로고
    • Variations of tandem repeat, regulatory element, and promoter regions revealed by wheat-rye amphiploids
    • PID: 18521118, COI: 1:CAS:528:DC%2BD1cXmsVOju78%3D
    • Tang ZX, Fu SL, Ren ZL, Zhou JP, Yan BJ, Zhang HQ (2008) Variations of tandem repeat, regulatory element, and promoter regions revealed by wheat-rye amphiploids. Genome 51(6):399–408. doi:10.1139/g08-027
    • (2008) Genome , vol.51 , Issue.6 , pp. 399-408
    • Tang, Z.X.1    Fu, S.L.2    Ren, Z.L.3    Zhou, J.P.4    Yan, B.J.5    Zhang, H.Q.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.