Application of hyperspectral remote sensing to cyanobacterial blooms in inland waters

Remote Sensing of Environment

Volumn 167, Issue , 2015, Pages 196-205

  Kudela, Raphael M ^a   Palacios, Sherry L ^b   Austerberry, David C ^c   Accorsi, Emma K ^d   Guild, Liane S ^b   Torres Perez, Juan ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NASA AMES RESEARCH CENTER   (United States)

^c UNIVERSITY OF MICHIGAN   (United States)

^d EMORY UNIVERSITY   (United States)

Author keywords

California; Cyanobacteria; Harmful algal bloom; Inland waters; Phycocyanin; Remote sensing

Indexed keywords

LAKES; MARINE BIOLOGY; SIGNAL TO NOISE RATIO; SPECTRAL RESOLUTION;

CALIFORNIA; CYANOBACTERIA; HARMFUL ALGAL BLOOMS; INLAND WATERS; PHYCOCYANIN;

REMOTE SENSING;

ALGAL BLOOM; ALGORITHM; AQUATIC ORGANISM; ATMOSPHERIC CORRECTION; CYANOBACTERIUM; MARINE ENVIRONMENT; PIGMENT; REMOTE SENSING; SATELLITE IMAGERY; SPATIAL RESOLUTION; SPECTRAL ANALYSIS; SUCCESSION; TOXIN;

CALIFORNIA; UNITED STATES;

ALGAE; APHANIZOMENON; CYANOBACTERIA; MICROCYSTIS;

EID: 84938990468     PISSN: 00344257     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.rse.2015.01.025     Document Type: Article

References (60)

1. Backer L.C., McNeel S.V., Barber T., Kirkpatrick B., Williams C., Irvin M., et al. Recreational exposure to microcystins during algal blooms in two California lakes. Toxicon 2010, 55:909-921.
2. Baxa D.V., Kurobe T., Ger K.A., Lehman P.W., The S.J. Estimating the abundance of toxic Microcystis in the San Francisco Estuary using quantitative Q-PCR. Harmful Algal Blooms 2010, 9:342-349.
3. Butler N., Carlisle J., Linville R. Toxicological summary and suggested action levels to reduce potential adverse health effects of six cyanotoxins 2012, Integrated Risk Assessment Branch, Office Environmental Health and Hazard Assessment, California Environmental Protection Agency, (26 pp.).
4. Butler N., Carlisle J.C., Linville R., Washburn B. Microcystins: A brief overview of their toxicity, and effects, with special reference to fish, wildlife, and livestock 2009, Integrated Risk Assessment Branch, Office Environmental Health and Hazard Assessment, California Environmental Protection Agency, (17 pp.).
5. Carmichael W.W. Health effects of toxin-producing cyanobacteria: "The CyanoHABs". Human and Ecological Risk Assessment International Journal 2001, 7:1393-1407.
6. Davis T.W., Berry D.L., Boyer G.L., Gobler C.J. The effects of temperature and nutrients on the growth dynamics of toxic and non-toxic strains of Microcystis during cyanobacterial blooms. Harmful Algae 2009, 8:715-725.
7. Devred E., Turpie K.R., Moses W., Klemas V.V., Moisan T., Babin M., et al. Future retrievals of water column bio-optical properties using the hyperspectral infrared imager (HyspIRI). Remote Sensing 2013, 5:6812-6837.
8. Fetcho K. Klamath river blue-green algae summary report 2007.
9. Gao B.-C., Montes M.J., Ahmad Z., Davis C.O. Atmospheric correction algorithm for hyperspectral remote sensing of ocean color from space. Applied Optics 2000, 39(6):887-896.
10. Gibble C.M., Kudela R.M. Detection of persistent microcystin toxins at the land-sea interface in Monterey Bay, California. Harmful Algae 2014, 39:146-153.
11. Gilroy D.J., Kauffman K.W., Hall R.A.X.H.S.C.F. Assessing potential health risks from microcystin toxins in blue-green algae dietary supplements. Environmental Health Perspectives 2000, 108:435-439.
12. Gower J.F., Doerffer R.R., Borstad G.A. Interpretation of the 685nm peak in water-leaving radiance spectra in terms of fluorescence, absorption and scattering, and its observation by MERIS. International Journal of Remote Sensing 1999, 20:1771-1786.
13. Guo L. Ecology: Doing battle with the green monster of Taihu Lake. Science 2007, 317:1166.
14. Hamlin L., Green R.O., Mouroulis P., Eastwood M., Wilson D., Dudik M., et al. Imaging spectrometer science measurements for terrestrial ecology: AVIRIS and new developments. Aerospace Conference, 2011 IEEE 2011, 1-7.
15. Hook S.J., Myers J.J., Thome K.J., Fitzgerald M., Kahle A.B. The MODIS/ASTER airborne simulator (MASTER)-A new instrument for earth science studies. Remote Sensing of Environment 2001, 76:93-102.
16. Hunter P.D., Tyler A.N., Carvalho L., Codd G.A., Maberly S.C. Hyperspectral remote sensing of cyanobacterial pigments as indicators for cell populations and toxins in eutrophic lakes. Remote Sensing of Environment 2010, 114:2705-2718.
17. Hunter P.D., Tyler A.N., Willby N.J., Glivear D.J. The spatial dynamics of vertical migration by Microcystis aeruginosa in a eutrophic shallow lake: A case study using high spatial resolution time-series airborne remote sensing. Limnology and Oceanography 2008, 53:239102406.
18. IOCCG Ocean Land Colour Instrument onboard Sentinel-3 (ESA) (accessed 3 October 2014). http://www.ioccg.org/sensors/olci.html.
19. Jacoby J.M., Collier D.C., Welch E.B., Hardy F.J., Crayton M. Environmental factors associated with a toxic bloom of Microcystis aeruginosa. Canadian Journal of Fisheries and Aquatic Sciences 2000, 57:231-240.
20. Johnston B.R., Jacoby J.M. Cyanobacterial toxicity and migration in a mesotrophic lake in western Washington, USA. Hydrobiologia 2003, 495:79-91.
21. Kahru M. Using satellites to monitor large-scale environmental change in the Baltic Sea. Monitoring algal blooms: New techniques for detecting large-scale environmental change 1997, 43-61. Springer- Verlag. M. Kahru, C.W. Brown (Eds.).
22. Kudela R.M. Characterization and deployment of solid phase adsorption toxin tracking (SPATT) resin for monitoring of microcystins in fresh and saltwater. Harmful Algae 2011, (11):117-125.
23. Kudela R.M., Garfield N., Bruland K.W. Bio-optical signatures and biogeochemistry from intense upwelling and relaxation in coastal California. Deep Sea Research, Part II 2006, 53:2999-3022.
24. Kurobe T., Baxa D.V., Mioni C.E., Kudela R.M., Smythe T.R., Waller S., et al. Identification of harmful cyanobacteria in the Sacramento-San Joaquin Delta and Clear Lake, California by DNA barcoding. SpringerPlus 2013, 2:491. 10.1186/2193-1801-2-491.
25. Kutser T. Passive optical remote sensing of cyanobacteria and other intense phytoplankton blooms in coastal and inland waters. International Journal of Remote Sensing 2009, 30:4401-4425.
26. Lee Z.P., Carder K.L., Steward R.G., Peacock T.G., Davis C.O., Mueller J.L. Remote sensing reflectance and inherent optical properties of oceanic waters derived from above-water measurements. Proceedings of SPIE 2963, Ocean Optics XIII 1997, 160.
27. Lehman P.W., Boyer G., Hall C., Waller S., Gerhrts K. Distribution and toxicity of a new colonial Microcystis aeruginosa bloom in the San Francisco Bay Estuary, California. Hydrobiologia 2005, 541:87-99.
28. Lehman P.W., Boyer G., Satchwell M., Waller S. The influence of environmental conditions on the seasonal variation of Microcystis cell density and microcystins concentration in San Francisco Estuary. Hydrobiologia 2008, 600:187-204.
29. Lehman P.W., Marr K., Boyer G.L., Acuna S., Teh S.J. Long-term trends and causal factors associated with Microcystis abundance and toxicity in San Francisco Estuary and implications for climate change impacts. Hydrobiologia 2013, 718:141-158.
30. Lehman E.M., McDonald K.E., Lehman J.T. Whole lake selective withdrawal experiment to control harmful cyanobacteria in an urban impoundment. Water Research 2009, 43:1187-1198.
31. Lucke R.L., Corson M., McGlothlin N.R., Butcher S.D., Wood D.L. The hyperspectral imager for the coastal ocean (HICO): Fast build for the ISS. International Society for Optics and Photonics 2010, August, (pp. 78130D-78130D).
32. Matthews M.W., Bernard S. Characterizing the absorption properties for remote sensing of three small optically-diverse South African reservoirs. Remote Sensing 2013, 5:4370-4404.
33. Matthews M.W., Bernard S., Robertson L. A new algorithm for detecting trophic status (chlorophyll-a), cyanobacterial-dominanance, surface scums and floating vegetation in coastal and inland waters from MERIS. Remote Sensing of Environment 2012, 124:637-652.
34. McDonald K.E., Lehman J.T. Dynamics of Aphanizomenon and MIcrocystis (cyanobacteria) during experimental manipulation of an urban impoundment. Lake and Reservoir Management 2013, 29:103-115.
35. Miller M.A., Kudela R.M., Jessup D.A. When marine ecosystems fall ill. The wildlife professional, spring 2012 2012, 44-48.
36. Miller M.A., Kudela R.M., Mekebri A., Crane D., Oates S.C., Tinker M.T., et al. Evidence for a novel marine harmful algal bloom: Cyanotoxin (microcystin) transfer from land to sea otters. PLoS ONE 2010, 5:e12576.
37. Mobley C.D. Light and water: Radiative transfer in natural waters 1995, Academic Press, San Diego, CA, (592 pp.).
38. Moisander P.H., Lehman P.W., Ochiai M., Corum S. Diversity of the toxic cyanobacterium Microcystis aeruginosa in the Klamath River and San Francisco Bay delta, California. Aquatic Microbial Ecology 2009, 57:19-31.
39. Morel A. Optical modeling of the upper ocean in relation to its biogenous matter content (case I waters). Journal of Geophysical Research 1998, 93:10749-10768.
40. Mouroulis P., Van Gorp B., Green R.O., Eastwood M., Boardman J., Richardson B.S., et al. Portable remote imaging spectrometer (PRISM): Laboratory and field calibration. International society for optics and photonics 2012, (pp. 85150F-85150F).
41. O'Neil J.M., Davis T.W., Burford M.A., Gobler C.J. The rise of harmful cyanobacteria blooms: The potential roles of eutrophication and climate change. Harmful Algae 2012, 14:313-334.
42. Ogashawara I., Misra D.R., Mishra S., Curtarelli M.P., Stech J.L. A performance review of reflectance based algorithms for predicting phycocyanin concentrations in inland waters. Remote Sensing 2013, 5:4774-4798.
43. PACE Pre-Aerosol, Clouds, and ocean Ecosystem (PACE) Mission Science Definition Team Report Available at. http://decadal.gsfc.nasa.gov/pace:documentation/PACE_SDT_Report_final.pdf.
44. Paerl H.W. Nutrient and other environmental controls of harmful cyanobacterial blooms along the freshwater-marine continuum. Cyanobacterial harmful algal blooms: State of the science and research needs advances in experimental medicine and biology 2008, 619:217-237. Springer Science+Business Media, New York. K.H. Hudnell (Ed.).
45. Paerl H.W., Hall N.S., Calandrino E.S. Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climatic-induced change. Science of the Total Environment 2011, 409:1739-1745.
46. Paerl H.W., Huisman J. Climate: Blooms like it hot. Science 2008, 320:57-58.
47. Paerl H.W., Huisman J. Climate change: A catalyst for global expansion of harmful cyanobacterial blooms. Environmental Microbiology Reports 2009, 1:27-37.
48. Paerl H.W., Otten T.G. Harmful cyanobacterial blooms: Causes, consequences, and controls. Microbial Ecology 2013, 65:995-1010.
49. Ryan J.P., Davis C.O., Tufillaro N.B., Kudela R.M., Gao B.-C. Application of the hyperspectral imager for the coastal ocean to phytoplankton ecology studies in Monterey Bay, CA, USA. Remote Sensing 2014, 6:1007-1025.
50. Sampath-Wiley P., Neefus C.D. An improved method for estimating R-phycoerythrin and R-phycocyanin contents from crude aqueous extracts of Porphyra (Banglales, Rhodophyta). Journal of Applied Phycology 2007, 19:123-129.
51. Sellner K.G. Physiology, ecology, and toxic properties of marine cyanobacteria blooms. Limnology and Oceanography 1997, 42:1089-1104.
52. Simis S.G.H., Peters S.W.M., Gons H.J. Remote sensing of the cyanobacteria pigment phycocyanin in turbid inland water. Limnology and Oceanography 2005, 50:237-245.
53. Simis S.G.H., Ruiz-Verdu A., Dominguez J.A., Pena-Martinez R., Peters S.W.M., Gons H.J. Influence of phytoplankton pigment composition on remote sensing of cyanobacterial biomass. Remote Sensing of Environment 2007, 106:414-427. 10.1016/j.rse.2006.09.008.
54. Tsuji K., Nalto S., Kondo F., Ishikawa N., Watanabe M.F., Suzuki M., et al. Stability of microcystins from cyanobacteria: Effect of light on decomposition and isomerization. Environmental Science and Technology 1994, 1094(28):173-177.
55. Vincent R.K., Quin X., McKay R.M.L., Miner J., Czajkowski K., Savino J., et al. Phycocyanin detection from LANDSAT TM data for mapping cyanobacterial blooms in Lake Erie. Remote Sensing of Environment 2004, 89:381-392. 10.1016/j.rse.2003.10.014.
56. Volten H., de Haan J.F., Hovenier J.W., Schreurs R., Vassen W., Dekker A.G., et al. Laboratory measurements of angular distributions of light scattered by phytoplankton and silt. Limnology and Oceanography 1998, 43:1180-1197.
57. Welker M., Steinburg C. Rates of humic substance photosensitized degradation of microcystin-LR in natural waters. Environmental Science and Technology 2000, 34:3415-3419.
58. Wynne T.T., Stumpf R.P., Tomlinson M.C., Dyble J. Characterizing a cyanobacterial bloom in western Lake Erie using satellite imagery and meteorological data. Limnology and Oceanography 2010, 55:2025-2036.
59. Wynne T.T., Stumpf R.P., Tomlinson M.C., Warner R.A., Tester P.A., Dyble J., et al. Relating spectral shape to cyanobacterial blooms in the Laurentian Great Lakes. International Journal of Remote Sensing 2008, 29:3665-3672. 10.1080/01431160802007640.
60. Zehnder A., Gorham P.R. Factors influencing the growth of Microcystis aeruginosa. Canadian Journal of Microbiology 1960, 6:645-660.