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Volumn 11, Issue 7, 2015, Pages

The Emerging Role for RNA Polymerase II in Regulating Virulence Gene Expression in Malaria Parasites

Author keywords

[No Author keywords available]

Indexed keywords

RNA POLYMERASE II; UNTRANSLATED RNA;

EID: 84938794414     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1004926     Document Type: Article
Times cited : (6)

References (37)
  • 1
    • 84876342100 scopus 로고    scopus 로고
    • Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum
    • Guizetti J, Scherf A, (2013) Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum. Cell Microbiol 15: 718–726. doi: 10.1111/cmi.12115 23351305
    • (2013) Cell Microbiol , vol.15 , pp. 718-726
    • Guizetti, J.1    Scherf, A.2
  • 2
    • 0028982168 scopus 로고
    • Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes
    • Smith JD, Chitnis CE, Craig AG, Roberts DJ, Hudson-Taylor DE, Peterson DS, Pinches R, Newbold CI, Miller LH, (1995) Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes. Cell 82: 101–110. 7606775
    • (1995) Cell , vol.82 , pp. 101-110
    • Smith, J.D.1    Chitnis, C.E.2    Craig, A.G.3    Roberts, D.J.4    Hudson-Taylor, D.E.5    Peterson, D.S.6    Pinches, R.7    Newbold, C.I.8    Miller, L.H.9
  • 3
    • 0029070914 scopus 로고
    • A large and diverse gene family (var) encodes 200–350 kD proteins implicated in the antigenic variation and cytoadherence of Plasmodium falciparum-infected erythrocytes
    • Su X, Heatwole VM, Wertheimer SP, Guinet F, Herrfeldt JV, Peterson DS, Ravetch JV, Wellems TE, (1995) A large and diverse gene family (var) encodes 200–350 kD proteins implicated in the antigenic variation and cytoadherence of Plasmodium falciparum-infected erythrocytes. Cell 82: 89–100. 7606788
    • (1995) Cell , vol.82 , pp. 89-100
    • Su, X.1    Heatwole, V.M.2    Wertheimer, S.P.3    Guinet, F.4    Herrfeldt, J.V.5    Peterson, D.S.6    Ravetch, J.V.7    Wellems, T.E.8
  • 4
    • 0029052741 scopus 로고
    • Cloning the P. falciparum gene encoding PfEMP1, a malarial variant antigen and adherence receptor on the surface of parasitized human erythrocytes
    • Baruch DI, Pasloske BL, Singh HB, Bi X, Ma XC, Feldman M, Taraschi TF, Howard RJ, (1995) Cloning the P. falciparum gene encoding PfEMP1, a malarial variant antigen and adherence receptor on the surface of parasitized human erythrocytes. Cell 82: 77–87. 7541722
    • (1995) Cell , vol.82 , pp. 77-87
    • Baruch, D.I.1    Pasloske, B.L.2    Singh, H.B.3    Bi, X.4    Ma, X.C.5    Feldman, M.6    Taraschi, T.F.7    Howard, R.J.8
  • 5
    • 60649095351 scopus 로고    scopus 로고
    • Genome-wide analysis of heterochromatin associates clonally variant gene regulation with perinuclear repressive centers in malaria parasites
    • Lopez-Rubio JJ, Mancio-Silva L, Scherf A, (2009) Genome-wide analysis of heterochromatin associates clonally variant gene regulation with perinuclear repressive centers in malaria parasites. Cell Host Microbe 5: 179–190. doi: 10.1016/j.chom.2008.12.012 19218088
    • (2009) Cell Host Microbe , vol.5 , pp. 179-190
    • Lopez-Rubio, J.J.1    Mancio-Silva, L.2    Scherf, A.3
  • 6
    • 36549069632 scopus 로고    scopus 로고
    • 5' flanking region of var genes nucleate histone modification patterns linked to phenotypic inheritance of virulence traits in malaria parasites
    • Lopez-Rubio JJ, Gontijo AM, Nunes MC, Issar N, Hernandez RR, Scherf A, (2007) 5' flanking region of var genes nucleate histone modification patterns linked to phenotypic inheritance of virulence traits in malaria parasites. Mol Microbiol 66: 1296–1305. 18028313
    • (2007) Mol Microbiol , vol.66 , pp. 1296-1305
    • Lopez-Rubio, J.J.1    Gontijo, A.M.2    Nunes, M.C.3    Issar, N.4    Hernandez, R.R.5    Scherf, A.6
  • 9
    • 44149124228 scopus 로고    scopus 로고
    • Cracking the RNA polymerase II CTD code
    • Egloff S, Murphy S, (2008) Cracking the RNA polymerase II CTD code. Trends Genet 24: 280–288. doi: 10.1016/j.tig.2008.03.008 18457900
    • (2008) Trends Genet , vol.24 , pp. 280-288
    • Egloff, S.1    Murphy, S.2
  • 10
    • 34447128131 scopus 로고    scopus 로고
    • RNA polymerase II carboxy-terminal domain with multiple connections
    • Cho EJ, (2007) RNA polymerase II carboxy-terminal domain with multiple connections. Exp Mol Med 39: 247–254. 17603278
    • (2007) Exp Mol Med , vol.39 , pp. 247-254
    • Cho, E.J.1
  • 11
    • 0344022572 scopus 로고    scopus 로고
    • Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
    • Ng HH, Robert F, Young RA, Struhl K, (2003) Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity. Mol Cell 11: 709–719. 12667453
    • (2003) Mol Cell , vol.11 , pp. 709-719
    • Ng, H.H.1    Robert, F.2    Young, R.A.3    Struhl, K.4
  • 12
    • 44149094965 scopus 로고    scopus 로고
    • Molecular evolution of the RNA polymerase II CTD
    • Chapman RD, Heidemann M, Hintermair C, Eick D, (2008) Molecular evolution of the RNA polymerase II CTD. Trends Genet 24: 289–296. doi: 10.1016/j.tig.2008.03.010 18472177
    • (2008) Trends Genet , vol.24 , pp. 289-296
    • Chapman, R.D.1    Heidemann, M.2    Hintermair, C.3    Eick, D.4
  • 13
    • 0036269480 scopus 로고    scopus 로고
    • Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang
    • Dacks JB, Marinets A, Ford DW, Cavalier-Smith T, Logsdon JM, Jr. (2002) Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang. Mol Biol Evol 19: 830–840. 12032239
    • (2002) Mol Biol Evol , vol.19 , pp. 830-840
    • Dacks, J.B.1    Marinets, A.2    Ford, D.W.3    Cavalier-Smith, T.4    Logsdon, J.M.5
  • 14
    • 0028041580 scopus 로고
    • Trypanosoma brucei RNA polymerase II is phosphorylated in the absence of carboxyl-terminal domain heptapeptide repeats
    • Chapman AB, Agabian N, (1994) Trypanosoma brucei RNA polymerase II is phosphorylated in the absence of carboxyl-terminal domain heptapeptide repeats. J Biol Chem 269: 4754–4760. 8106443
    • (1994) J Biol Chem , vol.269 , pp. 4754-4760
    • Chapman, A.B.1    Agabian, N.2
  • 15
    • 67349198160 scopus 로고    scopus 로고
    • An unusual recent expansion of the C-terminal domain of RNA polymerase II in primate malaria parasites features a motif otherwise found only in mammalian polymerases
    • Kishore SP, Perkins SL, Templeton TJ, Deitsch KW, (2009) An unusual recent expansion of the C-terminal domain of RNA polymerase II in primate malaria parasites features a motif otherwise found only in mammalian polymerases. J Mol Evol 68: 706–714. doi: 10.1007/s00239-009-9245-2 19449052
    • (2009) J Mol Evol , vol.68 , pp. 706-714
    • Kishore, S.P.1    Perkins, S.L.2    Templeton, T.J.3    Deitsch, K.W.4
  • 16
    • 84893803102 scopus 로고    scopus 로고
    • Recruitment of PfSET2 by RNA polymerase II to variant antigen encoding loci contributes to antigenic variation in P. falciparum
    • Ukaegbu UE, Kishore SP, Kwiatkowski DL, Pandarinath C, Dahan-Pasternak N, Dzikowski R, Deitsch KW, (2014) Recruitment of PfSET2 by RNA polymerase II to variant antigen encoding loci contributes to antigenic variation in P. falciparum. PLoS Pathog 10: e1003854. doi: 10.1371/journal.ppat.1003854 24391504
    • (2014) PLoS Pathog , vol.10 , pp. e1003854
    • Ukaegbu, U.E.1    Kishore, S.P.2    Kwiatkowski, D.L.3    Pandarinath, C.4    Dahan-Pasternak, N.5    Dzikowski, R.6    Deitsch, K.W.7
  • 18
    • 16244384503 scopus 로고    scopus 로고
    • A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation
    • Kizer KO, Phatnani HP, Shibata Y, Hall H, Greenleaf AL, Strahl BD, (2005) A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Mol Cell Biol 25: 3305–3316. 15798214
    • (2005) Mol Cell Biol , vol.25 , pp. 3305-3316
    • Kizer, K.O.1    Phatnani, H.P.2    Shibata, Y.3    Hall, H.4    Greenleaf, A.L.5    Strahl, B.D.6
  • 19
    • 0037512273 scopus 로고    scopus 로고
    • The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II
    • Li B, Howe L, Anderson S, Yates JR, IIIWorkman JL, (2003) The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II. J Biol Chem 278: 8897–8903. 12511561
    • (2003) J Biol Chem , vol.278 , pp. 8897-8903
    • Li, B.1    Howe, L.2    Anderson, S.3    Yates, J.R.4    Workman, J.L.5
  • 22
    • 84884685300 scopus 로고    scopus 로고
    • The antigenic switching network of Plasmodium falciparum and its implications for the immuno-epidemiology of malaria
    • Noble R, Christodoulou Z, Kyes S, Pinches R, Newbold CI, Recker M, (2013) The antigenic switching network of Plasmodium falciparum and its implications for the immuno-epidemiology of malaria. Elife (Cambridge) 2: e01074.
    • (2013) Elife (Cambridge) , vol.2 , pp. e01074
    • Noble, R.1    Christodoulou, Z.2    Kyes, S.3    Pinches, R.4    Newbold, C.I.5    Recker, M.6
  • 23
    • 80054758809 scopus 로고    scopus 로고
    • Var Gene promoter activation in clonal Plasmodium falciparum isolates follows a hierarchy and suggests a conserved switching program that is independent of genetic background
    • Enderes C, Kombila D, Dal Bianco M, Dzikowski R, Kremsner P, Frank M, (2011) Var Gene promoter activation in clonal Plasmodium falciparum isolates follows a hierarchy and suggests a conserved switching program that is independent of genetic background. J Infect Dis 204: 1620–1631. doi: 10.1093/infdis/jir594 21926380
    • (2011) J Infect Dis , vol.204 , pp. 1620-1631
    • Enderes, C.1    Kombila, D.2    Dal Bianco, M.3    Dzikowski, R.4    Kremsner, P.5    Frank, M.6
  • 24
    • 34250009026 scopus 로고    scopus 로고
    • Variable switching rates of malaria virulence genes are associated with chromosomal position
    • Frank M, Dzikowski R, Amulic B, Deitsch K, (2007) Variable switching rates of malaria virulence genes are associated with chromosomal position. Mol Microbiol 64: 1486–1498. 17555435
    • (2007) Mol Microbiol , vol.64 , pp. 1486-1498
    • Frank, M.1    Dzikowski, R.2    Amulic, B.3    Deitsch, K.4
  • 25
    • 84862648392 scopus 로고    scopus 로고
    • A statistically rigorous method for determining antigenic switching networks
    • Noble R, Recker M, (2012) A statistically rigorous method for determining antigenic switching networks. PLoS ONE 7: e39335. doi: 10.1371/journal.pone.0039335 22761765
    • (2012) PLoS ONE , vol.7 , pp. e39335
    • Noble, R.1    Recker, M.2
  • 26
    • 33846599782 scopus 로고    scopus 로고
    • Plasmodium falciparum var gene expression is developmentally controlled at the level of RNA polymerase II-mediated transcription initiation
    • Kyes S, Christodoulou Z, Pinches R, Kriek N, Horrocks P, Newbold C, (2007) Plasmodium falciparum var gene expression is developmentally controlled at the level of RNA polymerase II-mediated transcription initiation. Mol Microbiol 63: 1237–1247. 17257309
    • (2007) Mol Microbiol , vol.63 , pp. 1237-1247
    • Kyes, S.1    Christodoulou, Z.2    Pinches, R.3    Kriek, N.4    Horrocks, P.5    Newbold, C.6
  • 27
    • 0035974802 scopus 로고    scopus 로고
    • Malaria. Cooperative silencing elements in var genes
    • Deitsch KW, Calderwood MS, Wellems TE, (2001) Malaria. Cooperative silencing elements in var genes. Nature 412: 875–876.
    • (2001) Nature , vol.412 , pp. 875-876
    • Deitsch, K.W.1    Calderwood, M.S.2    Wellems, T.E.3
  • 29
    • 84891923027 scopus 로고    scopus 로고
    • Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs
    • Roberts TC, Morris KV, Weinberg MS, (2014) Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs. Epigenetics 9: 13–20. doi: 10.4161/epi.26700 24149621
    • (2014) Epigenetics , vol.9 , pp. 13-20
    • Roberts, T.C.1    Morris, K.V.2    Weinberg, M.S.3
  • 30
    • 84904246994 scopus 로고    scopus 로고
    • Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression
    • Vembar SS, Scherf A, Siegel TN, (2014) Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression. Curr Opin Microbiol 20: 153–161. doi: 10.1016/j.mib.2014.06.013 25022240
    • (2014) Curr Opin Microbiol , vol.20 , pp. 153-161
    • Vembar, S.S.1    Scherf, A.2    Siegel, T.N.3
  • 31
    • 84899567480 scopus 로고    scopus 로고
    • Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum
    • Wei C, Xiao T, Zhang P, Wang Z, Chen X, Zhang L, Yao M, Chen R, Wang H, (2014) Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum. PLoS ONE 9: e92946. 1 doi: 10.1371/journal.pone.0092946 24713982
    • (2014) PLoS ONE , vol.9 , pp. e92946
    • Wei, C.1    Xiao, T.2    Zhang, P.3    Wang, Z.4    Chen, X.5    Zhang, L.6    Yao, M.7    Chen, R.8    Wang, H.9
  • 36
    • 44349195470 scopus 로고    scopus 로고
    • Histone lysine methyltransferases and demethylases in Plasmodium falciparum
    • Cui L, Fan Q, Cui L, Miao J, (2008) Histone lysine methyltransferases and demethylases in Plasmodium falciparum. Int J Parasitol 38: 1083–1097. doi: 10.1016/j.ijpara.2008.01.002 18299133
    • (2008) Int J Parasitol , vol.38 , pp. 1083-1097
    • Cui, L.1    Fan, Q.2    Cui, L.3    Miao, J.4


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