Simulating the effects of light intensity and carbonate system composition on particulate organic and inorganic carbon production in Emiliania huxleyi

Journal of Theoretical Biology

Volumn 372, Issue , 2015, Pages 192-204

  Holtz, Lena Maria ^a   Wolf Gladrow, Dieter ^a   Thoms, Silke ^a  

^a ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESEARCH   (Germany)

Author keywords

CO2< inf> carbon uptake; Coccolithophores; Marine carbon cycle; Phytoplankton

Indexed keywords

CARBON; CARBON DIOXIDE; CARBONIC ACID DERIVATIVE; SEA WATER;

CARBON CYCLE; CARBON DIOXIDE; CARBONATE; COCCOLITH; INORGANIC CARBON; LIGHT EFFECT; LIGHT INTENSITY; ORGANIC CARBON; PHYTOPLANKTON;

ARTICLE; CARBON CYCLE; CARBON DIOXIDE TRANSPORT; CARBON DYNAMICS; CARBON FIXATION; CHEMICAL COMPOSITION; EMILIANIA HUXLEYI; HAPTOPHYTA; LIGHT INTENSITY; PHOTOSYNTHESIS; PRIORITY JOURNAL; SIMULATION; ACCLIMATIZATION; BIOLOGICAL MODEL; BONE MINERALIZATION; CHEMISTRY; CHLOROPLAST; CYTOSOL; LIGHT; METABOLISM; PHYSIOLOGY; PHYTOPLANKTON; RADIATION RESPONSE; SEA;

EMILIANIA HUXLEYI; HAPTOPHYCEAE;

ACCLIMATIZATION; CALCIFICATION, PHYSIOLOGIC; CARBON; CARBON DIOXIDE; CARBONATES; CHLOROPLASTS; CYTOSOL; HAPTOPHYTA; LIGHT; MODELS, BIOLOGICAL; OCEANS AND SEAS; PHOTOSYNTHESIS; PHYTOPLANKTON; SEAWATER;

EID: 84938522364     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2015.02.024     Document Type: Article

References (38)

1. Anning T., Nimer M., Merrett M.J., Brownlee C. Costs and benefits of calcification in coccolithophorids. J. Mar. Syst. 1996, 9:45-56.
2. Armstrong R.A., Lee C., Hedges J.I., Honjo S., Wakeham S.G. A new, mechanistic model for organic carbon fluxes in the ocean based on the quantitative association of POC with ballast minerals. Deep Sea Res. Part II 2002, 49(1-3):219-236.
3. Bach L.T., Riebesell U., Schulz K.G. Dissecting the impact of CO2 and pH on the mechanisms of photosynthesis and calcification in the coccolithophore Emiliania huxleyi. New Phytol. 2013, 5:1-14. 10.1111/nph.12225.
4. Berridge M.J., Lipp P., Bootman M.D. The versality and universality of calcium signalling. Nat. Rev. 2000, 1:11-21.
5. Boller A., Phaedra J., Cavanaugh C., Scott K. Low stable carbon isotope fractionation by coccolithophore RubisCO. Geochim. Cosmochim. Acta 2011, 75:7200-7207.
6. Bolton C.T., Stoll H.M. Late Miocene threshold response of marine algae to carbon dioxide limitation. Nature 2013, 500:558-562.
7. Brownlee C., Davies M., Nimer N., Dong L.F., Merrett M.J. Calcification, photosynthesis and intracellular regulation in Emiliania huxleyi. Bull. Inst. Oceanograph. 1995, 14:19-35.
8. Field C.B., Behrenfeld M.J., Randerson J.T., Falkowski P. Primary production of the biosphere. integrating terrestrial and oceanic components. Science 1998, 281:237-240.
9. Gouaux E., MacKinnon R. Principles of selective ion transport in channels and pumps. Science 2005, 310:1461-1465.
10. Gussone N., Langer G., Thoms S., Nehrke G., Eisenhauer A., Riebesell U., Wefer G. Cellular calcium pathways and isotope fractionation in Emiliania huxleyi. Geology 2006, 34:625-628.
11. Heldt H.W., Werdan K., Milovancev M., Geller G. Alkalinization of the chloroplast stroma caused by light-dependent proton flux into the thylakoid space. Biochim. Biophys. Acta 1973, 314:224-241.
12. Holtz L.-M., Thoms S., Langer G., Wolf-Gladrow D.A. Substrate supply for calcite precipitation in Emiliania huxleyi. assessment of different model approaches. J. Phycol. 2013, 49:417-426.
13. Holtz, L.-M., Langer, G., Rokitta, S.D., Thoms, S., 2013b. Synthesis of nanostructured calcite particles in coccolithophores, unicellular algae. In: Rai, M., Posten, C. (Eds.), Green Biosynthesis of Nanoparticles-Mechanisms and Applications. pp. 132-147. http://www.cabi.org.
14. Holtz L.-M., Thoms S., Wolf-Gladrow D.A. Numerical cell model investigating cellular carbon fluxes in Emiliania huxleyi. J. Theoret. Biol. 2015, 364:305-315. 10.1016/j.jtbi.2014.08.040.
15. Hopkinson B.M., Dupont C.L., Allen A.E., Morel F.M.M. Efficiency of the CO2-concentrating mechanism of diatoms. Proc. Natl. Acad. Sci. USA 2011, 108(10):3830-3837.
16. Hoppe C., Langer G., Rost B. Emiliania huxleyi shows identical responses to elevated pCO2 in TA and DIC manipulations. J. Exp. Mar. Biol. Ecol. 2011, 406:54-62.
17. Kottmeier, D.M., Rokitta, S.D., Tortell, P.D., Rost, B. Strong shift from CO2 to HCO3- uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynth. Res. Spec. Iss. CCM8 121, 2014, 265-275. http://dx.doi.org/10.1007/s11120-014-9984-9.
18. Langer G., Nehrke G., Probert I., Ly J., Ziveri P. Strain-specific responses of Emiliania huxleyi to changing seawater carbonate chemistry. Biogeosci. Discuss. 2009, 6:4361-4383.
19. Milliman J.D. Production and accumulation of calcium carbonate in the Ocean. Budget of a nonsteady state. Global Biochem. Cycles 1993, 7(4):927-957.
20. Mucci A. The solubility of calcite and aragonite in seawater at various salinities, temperatures, and one atmosphere total pressure. Am. J. Sci. 1983, 283:780-799.
21. Paasche E. A review of the coccolithophorid Emiliania huxleyi (Prymnesiophyceae), with particular reference to growth, coccolith formation, and calcification-photosynthesis interactions. Phycologia 2002, 40(6):503-529. ISSN 0031-8884.
22. Peters G.P., Marland G., Le Quéré C., Boden T., Canadell J.G., Raupach M.R. Rapid growth in CO2 emissions after the 2008-2009 global financial crisis. Nat. Clim. Change 2011, 2:2-4.
23. Poulton A.J., Adeya T.R., Balch W.M., Holligan P.M. Relating coccolithophore calcification rates to phytoplankton community dynamics. regional differences and implications for carbon export. Deep-Sea Res. II 2007, 54:538-557.
24. Prasad G.V.R., Coury L.A., Finn F., Zeidel M.L. Reconstituted aquaporin 1 water channels transport CO2 across membranes. J. Biol. Chem. 1998, 273(50):33123-33126.
25. Raven J.A., Crawfurd K. Environmental controls on coccolithophore calcification. Mar. Ecol. Prog. Ser. 2012, 470:137-166.
26. Rost B., Zondervan I., Riebesell U. Light-dependent carbon isotope fractionation in the coccolithophorid Emiliania huxleyi. Limnol. Oceanogr. 2002, 47(1):120-128.
27. Rouco, M., Branson, O., Lebrato, M., Iglesias-Rodiriguez, M.D., 2013. The effect of nitrate and phosphate availability on Emiliania huxleyi (NZEH) physiology under different CO2 scenarios. Front. Microbiol. 1-11. doi:10.3389/fmicb.2013.00155.
28. Schmidt K., De La Rocha C.L., Gallinari M., Cortese G. Not all calcite ballast is created equal. differing effects of foraminiferan and coccolith calcite on the formation and sinking of aggregates. Biogeosciences 2014, 11(135):135-145.
29. Sett S., Bach L.T., Schulz K.G., Koch-Klavsen S., Lebrato M., Riebesell U. Temperature modulates coccolithophorid sensitivity of growth,photosynthesis and calcification to increasing seawater pCO2. PLOS One 2014, 9(2):e88308. 10.1371/journal.pone.0088308.
30. Solomon S., Qin D., Manning M., Chen Z., Marquis M., Averyt K.B., Tignor M., Miller H.L. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, Cambridge University Press, Cambridge (UK), New York (USA), 987.
31. Supuran C.T., Scozzafava A. Carbonic anhydrases as targets for medicinal chemistry. Bioorg. Med. Chem. 2007, 15:4336-4350.
32. Thoms S., Pahlow M., Wolf-Gladrow D.A. Model of the carbon concentrating mechanism in chloroplasts of eukaryotic algae. J. Theoret. Biol. 2001, 208:295-313. ISSN 0022-5193.
33. Uehlein N., Otto B., Hanson D.T., Fischer M., McDowell N., Kaldenhoff R. Function of Nicotiana tabacum aquaporins as chloroplast gas pores challenges the concept of membrane CO2 permeability. Plant Cell 2008, 20:648-657.
34. van der Wal P., de Jong E., Westbroek P., de Bruijn W., Mulder-Stapel A. Ultrastructural polysaccharide localization in calcifying and naked cells of the coccolithophorid Emiliania huxleyi. Protoplasma 1983, 118:157-168. ISSN 0033-183X.
35. Wolf-Gladrow D.A., Zeebe R.E., Klaas C., Körtzinger A., Dickson A.G. Total alkalinity. the explicit conservative expression and its application to biogeochemical processes. Mar. Chem. 2007, 106:287-300.
36. Zeebe R.E., Wolf-Gladrow D.A. CO2 in Seawater: Equilibrium, Kinetics, Isotopes 2001, Elsevier Science Ltd, Amsterdam, ISBN 0444505792.
37. Zondervan I., Rost B., Riebesell U. Effect of CO2 concentration on the PIC/POC ratio in the coccolithophore Emiliania huxleyi grown under light-limiting conditions and different daylengths. J. Exp. Mar. Biol. Ecol. 2002, 272:55-70.
38. Zuddas P., Mucci A. Kinetics of calcite precipitation from seawater. I. A classical chemical kinetics description for strong electrolyte solutions. Geochim. Cosmochim. Acta 1994, 58(20):4353-4362.