-
1
-
-
85203363507
-
Relevance of breast cancer hormone receptors and other factors to the efficacy of adjuvant tamoxifen: Patient-level meta-analysis of randomised trials
-
Davies C, Godwin J, Gray R, Clarke M, Cutter D, Darby S et al. Relevance of breast cancer hormone receptors and other factors to the efficacy of adjuvant tamoxifen: patient-level meta-analysis of randomised trials. Lancet 2011; 378: 771-784.
-
(2011)
Lancet
, vol.378
, pp. 771-784
-
-
Davies, C.1
Godwin, J.2
Gray, R.3
Clarke, M.4
Cutter, D.5
Darby, S.6
-
2
-
-
0028846193
-
Sequence and characterization of a coactivator for the steroid hormone receptor superfamily
-
Onate SA, Tsai SY, Tsai MJ, O'Malley BW. Sequence and characterization of a coactivator for the steroid hormone receptor superfamily. Science 1995; 270: 1354-1357.
-
(1995)
Science
, vol.270
, pp. 1354-1357
-
-
Onate, S.A.1
Tsai, S.Y.2
Tsai, M.J.3
O'Malley, B.W.4
-
3
-
-
63449100824
-
Coassociation of estrogen receptor and p160 proteins predicts resistance to endocrine treatment; SRC-1 is an independent predictor of breast cancer recurrence
-
Redmond AM, Bane FT, Stafford AT, McIlroy M, Dillon MF, Crotty TB et al. Coassociation of estrogen receptor and p160 proteins predicts resistance to endocrine treatment; SRC-1 is an independent predictor of breast cancer recurrence. Clin Cancer Res 2009; 15: 2098-2106.
-
(2009)
Clin Cancer Res
, vol.15
, pp. 2098-2106
-
-
Redmond, A.M.1
Bane, F.T.2
Stafford, A.T.3
McIlroy, M.4
Dillon, M.F.5
Crotty, T.B.6
-
4
-
-
65949098187
-
The steroid receptor coactivator-1 regulates twist expression and promotes breast cancer metastasis
-
Qin L, Liu Z, Chen H, Xu J. The steroid receptor coactivator-1 regulates twist expression and promotes breast cancer metastasis. Cancer Res 2009; 69: 3819-3827.
-
(2009)
Cancer Res
, vol.69
, pp. 3819-3827
-
-
Qin, L.1
Liu, Z.2
Chen, H.3
Xu, J.4
-
5
-
-
84855882673
-
Metastatic progression with resistance to aromatase inhibitors is driven by the steroid receptor coactivator SRC-1
-
McBryan J, Theissen SM, Byrne C, Hughes E, Cocchiglia S, Sande S et al. Metastatic progression with resistance to aromatase inhibitors is driven by the steroid receptor coactivator SRC-1. Cancer Res 2012; 72: 548-559.
-
(2012)
Cancer Res
, vol.72
, pp. 548-559
-
-
McBryan, J.1
Theissen, S.M.2
Byrne, C.3
Hughes, E.4
Cocchiglia, S.5
Sande, S.6
-
6
-
-
84900021697
-
Global gene repression by the steroid receptor coactivator SRC-1 promotes oncogenesis
-
Walsh CA, Bolger JC, Byrne C, Cocchiglia S, Hao Y, Fagan A et al. Global gene repression by the steroid receptor coactivator SRC-1 promotes oncogenesis. Cancer Res 2014; 74: 2533-2544.
-
(2014)
Cancer Res
, vol.74
, pp. 2533-2544
-
-
Walsh, C.A.1
Bolger, J.C.2
Byrne, C.3
Cocchiglia, S.4
Hao, Y.5
Fagan, A.6
-
7
-
-
74549226503
-
HMGB proteins: Interactions with DNA and chromatin
-
Stros M. HMGB proteins: interactions with DNA and chromatin. Biochim Biophys Acta 2010; 1799: 101-113.
-
(2010)
Biochim Biophys Acta
, vol.1799
, pp. 101-113
-
-
Stros, M.1
-
8
-
-
2442530463
-
The role of the C-terminal extension (CTE) of the estrogen receptor alpha and beta DNA binding domain in DNA binding and interaction with HMGB
-
Melvin VS, Harrell C, Adelman JS, Kraus WL, Churchill M, Edwards DP. The role of the C-terminal extension (CTE) of the estrogen receptor alpha and beta DNA binding domain in DNA binding and interaction with HMGB. J Biol Chem 2004; 279: 14763-14771.
-
(2004)
J Biol Chem
, vol.279
, pp. 14763-14771
-
-
Melvin, V.S.1
Harrell, C.2
Adelman, J.S.3
Kraus, W.L.4
Churchill, M.5
Edwards, D.P.6
-
9
-
-
0029811475
-
HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation
-
Zappavigna V, Falciola L, Helmer-Citterich M, Mavilio F, Bianchi ME. HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation. EMBO J 1996; 15: 4981-4991.
-
(1996)
EMBO J
, vol.15
, pp. 4981-4991
-
-
Zappavigna, V.1
Falciola, L.2
Helmer-Citterich, M.3
Mavilio, F.4
Bianchi, M.E.5
-
10
-
-
0022826752
-
High mobility group proteins 1 and 2 stimulate transcription in vitro by RNA polymerases II and III
-
Tremethick DJ, Molloy PL. High mobility group proteins 1 and 2 stimulate transcription in vitro by RNA polymerases II and III. J Biol Chem 1986; 261: 6986-6992.
-
(1986)
J Biol Chem
, vol.261
, pp. 6986-6992
-
-
Tremethick, D.J.1
Molloy, P.L.2
-
11
-
-
77449136887
-
High-mobility group protein HMGB2 regulates human erythroid differentiation through trans-activation of GFI1B transcription
-
Laurent B, Randrianarison-Huetz V, Marechal V, Mayeux P, Dusanter-Fourt I, Dumenil D. High-mobility group protein HMGB2 regulates human erythroid differentiation through trans-activation of GFI1B transcription. Blood 2010; 115: 687-695.
-
(2010)
Blood
, vol.115
, pp. 687-695
-
-
Laurent, B.1
Randrianarison-Huetz, V.2
Marechal, V.3
Mayeux, P.4
Dusanter-Fourt, I.5
Dumenil, D.6
-
12
-
-
84872712322
-
Overexpression of high mobility group box 1 and 2 is associated with the progression and angiogenesis of human bladder carcinoma
-
Wang W, Jiang H, Zhu H, Zhang H, Gong J, Zhang L et al. Overexpression of high mobility group box 1 and 2 is associated with the progression and angiogenesis of human bladder carcinoma. Oncol Lett 2013; 5: 884-888.
-
(2013)
Oncol Lett
, vol.5
, pp. 884-888
-
-
Wang, W.1
Jiang, H.2
Zhu, H.3
Zhang, H.4
Gong, J.5
Zhang, L.6
-
13
-
-
0031826698
-
High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells
-
Boonyaratanakornkit V, Melvin V, Prendergast P, Altmann M, Ronfani L, Bianchi ME et al. High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells. Mol Cell Biol 1998; 18: 4471-4487.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 4471-4487
-
-
Boonyaratanakornkit, V.1
Melvin, V.2
Prendergast, P.3
Altmann, M.4
Ronfani, L.5
Bianchi, M.E.6
-
14
-
-
84872540994
-
DNA-binding specificities of human transcription factors
-
Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P et al. DNA-binding specificities of human transcription factors. Cell 2013; 152: 327-339.
-
(2013)
Cell
, vol.152
, pp. 327-339
-
-
Jolma, A.1
Yan, J.2
Whitington, T.3
Toivonen, J.4
Nitta, K.R.5
Rastas, P.6
-
15
-
-
84855364818
-
Global characterization of the SRC-1 transcriptome identifies ADAM22 as an ER-independent mediator of endocrine-resistant breast cancer
-
McCartan D, Bolger JC, Fagan A, Byrne C, Hao Y, Qin L et al. Global characterization of the SRC-1 transcriptome identifies ADAM22 as an ER-independent mediator of endocrine-resistant breast cancer. Cancer Res 2012; 72: 220-229.
-
(2012)
Cancer Res
, vol.72
, pp. 220-229
-
-
McCartan, D.1
Bolger, J.C.2
Fagan, A.3
Byrne, C.4
Hao, Y.5
Qin, L.6
-
16
-
-
0029757618
-
Myc-max heterodimers activate a DEAD box gene and interact with multiple e box-related sites in vivo
-
Grandori C, Mac J, Siebelt F, Ayer DE, Eisenman RN. Myc-Max heterodimers activate a DEAD box gene and interact with multiple E box-related sites in vivo. EMBO J 1996; 15: 4344-4357.
-
(1996)
EMBO J
, vol.15
, pp. 4344-4357
-
-
Grandori, C.1
Mac, J.2
Siebelt, F.3
Ayer, D.E.4
Eisenman, R.N.5
-
17
-
-
79961016545
-
Ddx18 is essential for cell-cycle progression in zebrafish hematopoietic cells and is mutated in human AML
-
Payne EM, Bolli N, Rhodes J, Abdel-Wahab OI, Levine R, Hedvat CV et al. Ddx18 is essential for cell-cycle progression in zebrafish hematopoietic cells and is mutated in human AML. Blood 2011; 118: 903-915.
-
(2011)
Blood
, vol.118
, pp. 903-915
-
-
Payne, E.M.1
Bolli, N.2
Rhodes, J.3
Abdel-Wahab, O.I.4
Levine, R.5
Hedvat, C.V.6
-
18
-
-
79151483638
-
An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients
-
Gyorffy B, Lanczky A, Eklund AC, Denkert C, Budczies J, Li Q et al. An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients. Breast Cancer Res Treat 2010; 123: 725-731.
-
(2010)
Breast Cancer Res Treat
, vol.123
, pp. 725-731
-
-
Gyorffy, B.1
Lanczky, A.2
Eklund, A.C.3
Denkert, C.4
Budczies, J.5
Li, Q.6
-
19
-
-
69249137029
-
Biological determinants of endocrine resistance in breast cancer
-
Musgrove EA, Sutherland RL. Biological determinants of endocrine resistance in breast cancer. Nat Rev Cancer 2009; 9: 631-643.
-
(2009)
Nat Rev Cancer
, vol.9
, pp. 631-643
-
-
Musgrove, E.A.1
Sutherland, R.L.2
-
20
-
-
34547691136
-
FOXA1 expression in breast cancer-correlation with luminal subtype A and survival
-
Badve S, Turbin D, Thorat MA, Morimiya A, Nielsen TO, Perou CM et al. FOXA1 expression in breast cancer-correlation with luminal subtype A and survival. Clin Cancer Res 2007; 13: 4415-4421.
-
(2007)
Clin Cancer Res
, vol.13
, pp. 4415-4421
-
-
Badve, S.1
Turbin, D.2
Thorat, M.A.3
Morimiya, A.4
Nielsen, T.O.5
Perou, C.M.6
-
21
-
-
84862505855
-
Impact of FOXA1 expression on the prognosis of patients with hormone receptorpositive breast cancer
-
Hisamatsu Y, Tokunaga E, Yamashita N, Akiyoshi S, Okada S, Nakashima Y et al. Impact of FOXA1 expression on the prognosis of patients with hormone receptorpositive breast cancer. Ann Surg Oncol 2012; 19: 1145-1152.
-
(2012)
Ann Surg Oncol
, vol.19
, pp. 1145-1152
-
-
Hisamatsu, Y.1
Tokunaga, E.2
Yamashita, N.3
Akiyoshi, S.4
Okada, S.5
Nakashima, Y.6
-
22
-
-
84856008906
-
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
-
Ross-Innes CS, Stark R, Teschendorff AE, Holmes KA, Ali HR, Dunning MJ et al. Differential oestrogen receptor binding is associated with clinical outcome in breast cancer. Nature 2012; 481: 389-393.
-
(2012)
Nature
, vol.481
, pp. 389-393
-
-
Ross-Innes, C.S.1
Stark, R.2
Teschendorff, A.E.3
Holmes, K.A.4
Ali, H.R.5
Dunning, M.J.6
-
23
-
-
54949152283
-
Ets regulates peroxiredoxin1 and 5 expressions through their interaction with the high-mobility group protein B1
-
Shiota M, Izumi H, Miyamoto N, Onitsuka T, Kashiwagi E, Kidani A et al. Ets regulates peroxiredoxin1 and 5 expressions through their interaction with the high-mobility group protein B1. Cancer Sci 2008; 99: 1950-1959.
-
(2008)
Cancer Sci
, vol.99
, pp. 1950-1959
-
-
Shiota, M.1
Izumi, H.2
Miyamoto, N.3
Onitsuka, T.4
Kashiwagi, E.5
Kidani, A.6
-
24
-
-
33750442923
-
Genome-wide analysis of estrogen receptor binding sites
-
Carroll JS, Meyer CA, Song J, Li W, Geistlinger TR, Eeckhoute J et al. Genome-wide analysis of estrogen receptor binding sites. Nat Genet 2006; 38: 1289-1297.
-
(2006)
Nat Genet
, vol.38
, pp. 1289-1297
-
-
Carroll, J.S.1
Meyer, C.A.2
Song, J.3
Li, W.4
Geistlinger, T.R.5
Eeckhoute, J.6
-
25
-
-
84880918115
-
PKA phosphorylation redirects ERalpha to promoters of a unique gene set to induce tamoxifen resistance
-
de Leeuw R, Flach K, Bentin Toaldo C, Alexi X, Canisius S, Neefjes J et al. PKA phosphorylation redirects ERalpha to promoters of a unique gene set to induce tamoxifen resistance. Oncogene 2013; 32: 3543-3551.
-
(2013)
Oncogene
, vol.32
, pp. 3543-3551
-
-
De Leeuw, R.1
Flach, K.2
Bentin Toaldo, C.3
Alexi, X.4
Canisius, S.5
Neefjes, J.6
-
26
-
-
43449106199
-
Ets-2 and p160 proteins collaborate to regulate c-myc in endocrine resistant breast cancer
-
Al-azawi D, Ilroy MM, Kelly G, Redmond AM, Bane FT, Cocchiglia S et al. Ets-2 and p160 proteins collaborate to regulate c-Myc in endocrine resistant breast cancer. Oncogene 2008; 27: 3021-3031.
-
(2008)
Oncogene
, vol.27
, pp. 3021-3031
-
-
Al-azawi, D.1
Ilroy, M.M.2
Kelly, G.3
Redmond, A.M.4
Bane, F.T.5
Cocchiglia, S.6
-
27
-
-
38849091433
-
Tamoxifen resistance in breast tumors is driven by growth factor receptor signaling with repression of classic estrogen receptor genomic function
-
Massarweh S, Osborne CK, Creighton CJ, Qin L, Tsimelzon A, Huang S et al. Tamoxifen resistance in breast tumors is driven by growth factor receptor signaling with repression of classic estrogen receptor genomic function. Cancer Res 2008; 68: 826-833.
-
(2008)
Cancer Res
, vol.68
, pp. 826-833
-
-
Massarweh, S.1
Osborne, C.K.2
Creighton, C.J.3
Qin, L.4
Tsimelzon, A.5
Huang, S.6
-
28
-
-
70450199132
-
The DEAD-box protein p72 regulates ERalpha-/oestrogen-dependent transcription and cell growth, and is associated with improved survival in ERalpha-positive breast cancer
-
Wortham NC, Ahamed E, Nicol SM, Thomas RS, Periyasamy M, Jiang J et al. The DEAD-box protein p72 regulates ERalpha-/oestrogen-dependent transcription and cell growth, and is associated with improved survival in ERalpha-positive breast cancer. Oncogene 2009; 28: 4053-4064.
-
(2009)
Oncogene
, vol.28
, pp. 4053-4064
-
-
Wortham, N.C.1
Ahamed, E.2
Nicol, S.M.3
Thomas, R.S.4
Periyasamy, M.5
Jiang, J.6
-
29
-
-
33745463624
-
Differential response to phytoestrogens in endocrine sensitive and resistant breast cancer cells in vitro
-
Limer JL, Parkes AT, Speirs V. Differential response to phytoestrogens in endocrine sensitive and resistant breast cancer cells in vitro. Int J Cancer 2006; 119: 515-521.
-
(2006)
Int J Cancer
, vol.119
, pp. 515-521
-
-
Limer, J.L.1
Parkes, A.T.2
Speirs, V.3
-
30
-
-
33845209913
-
A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes
-
Neve RM, Chin K, Fridlyand J, Yeh J, Baehner FL, Fevr T et al. A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes. Cancer Cell 2006; 10: 515-527.
-
(2006)
Cancer Cell
, vol.10
, pp. 515-527
-
-
Neve, R.M.1
Chin, K.2
Fridlyand, J.3
Yeh, J.4
Baehner, F.L.5
Fevr, T.6
-
31
-
-
53849125022
-
Cyclooxygenase-2 predicts adverse effects of tamoxifen: A possible mechanism of role for nuclear HER2 in breast cancer patients
-
Dillon MF, Stafford AT, Kelly G, Redmond AM, McIlroy M, Crotty TB et al. Cyclooxygenase-2 predicts adverse effects of tamoxifen: a possible mechanism of role for nuclear HER2 in breast cancer patients. Endocr Relat Cancer 2008; 15: 745-753.
-
(2008)
Endocr Relat Cancer
, vol.15
, pp. 745-753
-
-
Dillon, M.F.1
Stafford, A.T.2
Kelly, G.3
Redmond, A.M.4
McIlroy, M.5
Crotty, T.B.6
-
32
-
-
67649834440
-
ChIP-seq: Using high-throughput sequencing to discover protein-DNA interactions
-
Schmidt D, Wilson MD, Spyrou C, Brown GD, Hadfield J, Odom DT. ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions. Methods 2009; 48: 240-248.
-
(2009)
Methods
, vol.48
, pp. 240-248
-
-
Schmidt, D.1
Wilson, M.D.2
Spyrou, C.3
Brown, G.D.4
Hadfield, J.5
Odom, D.T.6
-
33
-
-
67649884743
-
Fast and accurate short read alignment with burrows-wheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009; 25: 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
34
-
-
53849146020
-
Modelbased analysis of ChIP-seq (MACS)
-
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE et al. Modelbased analysis of ChIP-Seq (MACS). Genome Biol 2008; 9: R137.
-
(2008)
Genome Biol
, vol.9
, pp. R137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
-
35
-
-
57449100870
-
Design and analysis of ChIP-seq experiments for DNA-binding proteins
-
Kharchenko PV, Tolstorukov MY, Park PJ. Design and analysis of ChIP-seq experiments for DNA-binding proteins. Nat Biotechnol 2008; 26: 1351-1359.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1351-1359
-
-
Kharchenko, P.V.1
Tolstorukov, M.Y.2
Park, P.J.3
-
37
-
-
80052022462
-
Cistrome: An integrative platform for transcriptional regulation studies
-
Liu T, Ortiz JA, Taing L, Meyer CA, Lee B, Zhang Y et al. Cistrome: an integrative platform for transcriptional regulation studies. Genome Biol 2011; 12: R83.
-
(2011)
Genome Biol
, vol.12
, pp. R83
-
-
Liu, T.1
Ortiz, J.A.2
Taing, L.3
Meyer, C.A.4
Lee, B.5
Zhang, Y.6
-
38
-
-
77952214662
-
GREAT improves functional interpretation of cis-regulatory regions
-
McLean CY, Bristor D, Hiller M, Clarke SL, Schaar BT, Lowe CB et al. GREAT improves functional interpretation of cis-regulatory regions. Nat Biotechnol 2010; 28: 495-501.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
Bristor, D.2
Hiller, M.3
Clarke, S.L.4
Schaar, B.T.5
Lowe, C.B.6
-
39
-
-
79959983507
-
CENTDIST: Discovery of co-associated factors by motif distribution
-
Zhang Z, Chang CW, Goh WL, Sung WK, Cheung E. CENTDIST: discovery of co-associated factors by motif distribution. Nucleic Acids Res 2011; 39: W391-W399.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W391-W399
-
-
Zhang, Z.1
Chang, C.W.2
Goh, W.L.3
Sung, W.K.4
Cheung, E.5
-
40
-
-
57249114507
-
BASH: A tool for managing bead array spatial artefacts
-
Cairns JM, Dunning MJ, Ritchie ME, Russell R, Lynch AG. BASH: a tool for managing Bead Array spatial artefacts. Bioinformatics 2008; 24: 2921-2922.
-
(2008)
Bioinformatics
, vol.24
, pp. 2921-2922
-
-
Cairns, J.M.1
Dunning, M.J.2
Ritchie, M.E.3
Russell, R.4
Lynch, A.G.5
-
42
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S et al. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 2004; 5: R80.
-
(2004)
Genome Biol
, vol.5
, pp. R80
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
-
43
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol: 2004; 3; Article 3.
-
(2004)
Stat Appl Genet Mol Biol
, pp. 3
-
-
Smyth, G.K.1
-
44
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc 1995; 57: 289-300.
-
(1995)
J R Stat Soc
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
|