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Volumn 603, Issue , 2007, Pages 327-338

Analysis of the three Yersinia pestis CRISPR loci provides new tools for phylogenetic studies and possibly for the investigation of ancient DNA

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

EID: 84934438514     PISSN: 00652598     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-0-387-72124-8_30     Document Type: Conference Paper
Times cited : (48)

References (21)
  • 2
    • 0033598784 scopus 로고    scopus 로고
    • Achtman, M., Zurth, K., Morelli, G., Torrea, G., Guiyoule, A. and Carniel, E. (1999) Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis [published erratum appears in Proc. Natl. Acad. Sci. USA 2000 97, 8192]. Proc. Natl. Acad. Sci. USA 96, 14043-14048.
    • Achtman, M., Zurth, K., Morelli, G., Torrea, G., Guiyoule, A. and Carniel, E. (1999) Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis [published erratum appears in Proc. Natl. Acad. Sci. USA 2000 97, 8192]. Proc. Natl. Acad. Sci. USA 96, 14043-14048.
  • 4
    • 33646227714 scopus 로고    scopus 로고
    • Brudey, K, Driscoll, J.R, Rigouts, L, Prodinger, W.M, Gori, A, Al-Hajoj, S.A, Allix, C, Aristimuno, L, Arora, J, Baumanis, V, Binder, L, Cafrune, P, Cataldi, A, Cheong, S, Diel, R, Ellermeier, C, Evans, J.T, Fauville-Dufaux, M, Ferdinand, S, Garcia de Viedma, D, Garzelli, C, Gazzola, L, Gomes, H.M, Guttierez, M.C, Hawkey, P.M, van Helden, P.D, Kadival, G.V, Kreiswirth, B.N, Kremer, K, Kubin, M, Kulkarni, S.P, Liens, B, Lillebaek, T, Ho, M.L, Martin, C, Martin, C, Mokrousov, I, Narvskaia, O, Ngeow, Y.F, Naumann, L, Niemann, S, Parwati, I, Rahim, Z, Rasolofo-Razanamparany, V, Rasolonavalona, T, Rossetti, M.L, Rusch-Gerdes, S, Sajduda, A, Samper, S, Shemyakin, I.G, Singh, U.B, Somoskovi, A, Skuce, R.A, van Soolingen, D, Streicher, E.M, Suffys, P.N, Tortoli, E, Tracevska, T, Vincent, V. Victor, T.C. Warren, R.M, Yap, S.F, Zaman, K, Portaels, F, Rastogi, N. and Sola, C, 2006 Mycobacterium tuberculosis complex genetic div
    • Brudey, K., Driscoll, J.R., Rigouts, L., Prodinger, W.M., Gori, A., Al-Hajoj, S.A., Allix, C., Aristimuno, L., Arora, J., Baumanis, V., Binder, L., Cafrune, P., Cataldi, A., Cheong, S., Diel, R., Ellermeier, C., Evans, J.T., Fauville-Dufaux, M., Ferdinand, S., Garcia de Viedma, D., Garzelli, C., Gazzola, L., Gomes, H.M., Guttierez, M.C., Hawkey, P.M., van Helden, P.D., Kadival, G.V., Kreiswirth, B.N., Kremer, K., Kubin, M., Kulkarni, S.P., Liens, B., Lillebaek, T., Ho, M.L., Martin, C., Martin, C., Mokrousov, I., Narvskaia, O., Ngeow, Y.F., Naumann, L., Niemann, S., Parwati, I., Rahim, Z., Rasolofo-Razanamparany, V., Rasolonavalona, T., Rossetti, M.L., Rusch-Gerdes, S., Sajduda, A., Samper, S., Shemyakin, I.G., Singh, U.B., Somoskovi, A., Skuce, R.A., van Soolingen, D., Streicher, E.M., Suffys, P.N., Tortoli, E., Tracevska, T., Vincent, V. Victor, T.C. Warren, R.M., Yap, S.F., Zaman, K., Portaels, F., Rastogi, N. and Sola, C. (2006) Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol. 6, 23.
  • 6
    • 1242273715 scopus 로고    scopus 로고
    • Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims
    • Gilbert, M.T., Cuccui, J., White, W., Lynnerup, N., Titball, R.W., Cooper, A. and Prentice, M.B. (2004) Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims. Microbiology 150, 341-354.
    • (2004) Microbiology , vol.150 , pp. 341-354
    • Gilbert, M.T.1    Cuccui, J.2    White, W.3    Lynnerup, N.4    Titball, R.W.5    Cooper, A.6    Prentice, M.B.7
  • 7
    • 0036267740 scopus 로고    scopus 로고
    • Identification of genes that are associated with DNA repeats in prokaryotes
    • Jansen, R., Embden, J.D., Gaastra, W. and Schouls, L.M. (2002) Identification of genes that are associated with DNA repeats in prokaryotes. Mol. Microbiol. 43, 1565-1575.
    • (2002) Mol. Microbiol , vol.43 , pp. 1565-1575
    • Jansen, R.1    Embden, J.D.2    Gaastra, W.3    Schouls, L.M.4
  • 9
    • 33748096466 scopus 로고    scopus 로고
    • A putative viral defence mechanism in archaeal cells
    • Lillestol, R.K., Redder, P., Garrett, R.A. and Brugger, K. (2006) A putative viral defence mechanism in archaeal cells. Archaea 2, 59-72.
    • (2006) Archaea , vol.2 , pp. 59-72
    • Lillestol, R.K.1    Redder, P.2    Garrett, R.A.3    Brugger, K.4
  • 10
    • 34248374277 scopus 로고    scopus 로고
    • Makarova, K.S., Grishin, N.V., Shabalina, S.A., Wolf, Y.I. and Koonin, E.V. (2006) A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1, 7.
    • Makarova, K.S., Grishin, N.V., Shabalina, S.A., Wolf, Y.I. and Koonin, E.V. (2006) A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1, 7.
  • 11
    • 16444385662 scopus 로고    scopus 로고
    • Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
    • Mojica, F.J., Diez-Villasenor, C., Garcia-Martinez, J. and Soria, E. (2005) Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J. Mol. Evol. 60, 174-182.
    • (2005) J. Mol. Evol , vol.60 , pp. 174-182
    • Mojica, F.J.1    Diez-Villasenor, C.2    Garcia-Martinez, J.3    Soria, E.4
  • 12
    • 4844223197 scopus 로고    scopus 로고
    • Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis
    • Pourcel, C., Andre-Mazeaud, F., Neubauer, H., Ramisse, F. and Vergnaud, G. (2004) Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol. 4, 22.
    • (2004) BMC Microbiol , vol.4 , pp. 22
    • Pourcel, C.1    Andre-Mazeaud, F.2    Neubauer, H.3    Ramisse, F.4    Vergnaud, G.5
  • 13
    • 15844390228 scopus 로고    scopus 로고
    • CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
    • Pourcel, C., Salvignol, G. and Vergnaud, G. (2005) CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. Microbiology 151, 653-663.
    • (2005) Microbiology , vol.151 , pp. 653-663
    • Pourcel, C.1    Salvignol, G.2    Vergnaud, G.3
  • 15
    • 33744911380 scopus 로고    scopus 로고
    • Shapiro, B., Rambaut, A. and Gilbert, M.T. (2006) No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis et al.). Int. J. Infect. Dis. 10, 334-335; author reply 335-336.
    • Shapiro, B., Rambaut, A. and Gilbert, M.T. (2006) No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis et al.). Int. J. Infect. Dis. 10, 334-335; author reply 335-336.
  • 18
    • 84991315942 scopus 로고    scopus 로고
    • Yersinia pestis genotyping
    • author reply 1318-1319
    • Vergnaud, G. (2005) Yersinia pestis genotyping. Emerg. Infect. Dis. 11: 1317-1318; author reply 1318-1319.
    • (2005) Emerg. Infect. Dis , vol.11 , pp. 1317-1318
    • Vergnaud, G.1
  • 19
    • 5644235022 scopus 로고    scopus 로고
    • Comparative and evolutionary genomics of Yersinia pestis
    • Zhou, D., Han Y., Song, Y., Huang, P. and Yang, R. (2004a) Comparative and evolutionary genomics of Yersinia pestis. Microbes Infect. 6, 1226-1234.
    • (2004) Microbes Infect , vol.6 , pp. 1226-1234
    • Zhou, D.1    Han, Y.2    Song, Y.3    Huang, P.4    Yang, R.5
  • 21
    • 12244277890 scopus 로고    scopus 로고
    • Characterization of Mycobacterium tuberculosis complex DNAs from Egyptian mummies by spoligotyping
    • Zink, A.R., Sola, C., Reischl, U., Grabner, W., Rastogi, N., Wolf, H. and Nerlich, A.G. (2003) Characterization of Mycobacterium tuberculosis complex DNAs from Egyptian mummies by spoligotyping. J. Clin. Microbiol. 41, 359-367.
    • (2003) J. Clin. Microbiol , vol.41 , pp. 359-367
    • Zink, A.R.1    Sola, C.2    Reischl, U.3    Grabner, W.4    Rastogi, N.5    Wolf, H.6    Nerlich, A.G.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.