-
1
-
-
19944390941
-
Microevolution and history of the plague bacillus, Yersinia pestis
-
Achtman, M., Morelli G., Zhu, P., Wirth, T., Diehl, I., Kusecek, B., Vogler, A.J., Wagner, D.M., Allender, C.J., Easterday, W.R., Chenal-Francisque, V., Worsham, P., Thomson, N.R., Parkhill, J., Lindler, L.E., Carniel, E. and Keim, P. (2004) Microevolution and history of the plague bacillus, Yersinia pestis. Proc. Natl. Acad. Sci. USA 101, 17837-17842.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 17837-17842
-
-
Achtman, M.1
Morelli, G.2
Zhu, P.3
Wirth, T.4
Diehl, I.5
Kusecek, B.6
Vogler, A.J.7
Wagner, D.M.8
Allender, C.J.9
Easterday, W.R.10
Chenal-Francisque, V.11
Worsham, P.12
Thomson, N.R.13
Parkhill, J.14
Lindler, L.E.15
Carniel, E.16
Keim, P.17
-
2
-
-
0033598784
-
-
Achtman, M., Zurth, K., Morelli, G., Torrea, G., Guiyoule, A. and Carniel, E. (1999) Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis [published erratum appears in Proc. Natl. Acad. Sci. USA 2000 97, 8192]. Proc. Natl. Acad. Sci. USA 96, 14043-14048.
-
Achtman, M., Zurth, K., Morelli, G., Torrea, G., Guiyoule, A. and Carniel, E. (1999) Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis [published erratum appears in Proc. Natl. Acad. Sci. USA 2000 97, 8192]. Proc. Natl. Acad. Sci. USA 96, 14043-14048.
-
-
-
-
3
-
-
2042522696
-
Intraspecific diversity of Yersinia pestis
-
Anisimov, A.P., Lindler, L.E. and Pier, G.B. (2004) Intraspecific diversity of Yersinia pestis. Clin. Microbiol. Rev. 17, 434-464.
-
(2004)
Clin. Microbiol. Rev
, vol.17
, pp. 434-464
-
-
Anisimov, A.P.1
Lindler, L.E.2
Pier, G.B.3
-
4
-
-
33646227714
-
-
Brudey, K, Driscoll, J.R, Rigouts, L, Prodinger, W.M, Gori, A, Al-Hajoj, S.A, Allix, C, Aristimuno, L, Arora, J, Baumanis, V, Binder, L, Cafrune, P, Cataldi, A, Cheong, S, Diel, R, Ellermeier, C, Evans, J.T, Fauville-Dufaux, M, Ferdinand, S, Garcia de Viedma, D, Garzelli, C, Gazzola, L, Gomes, H.M, Guttierez, M.C, Hawkey, P.M, van Helden, P.D, Kadival, G.V, Kreiswirth, B.N, Kremer, K, Kubin, M, Kulkarni, S.P, Liens, B, Lillebaek, T, Ho, M.L, Martin, C, Martin, C, Mokrousov, I, Narvskaia, O, Ngeow, Y.F, Naumann, L, Niemann, S, Parwati, I, Rahim, Z, Rasolofo-Razanamparany, V, Rasolonavalona, T, Rossetti, M.L, Rusch-Gerdes, S, Sajduda, A, Samper, S, Shemyakin, I.G, Singh, U.B, Somoskovi, A, Skuce, R.A, van Soolingen, D, Streicher, E.M, Suffys, P.N, Tortoli, E, Tracevska, T, Vincent, V. Victor, T.C. Warren, R.M, Yap, S.F, Zaman, K, Portaels, F, Rastogi, N. and Sola, C, 2006 Mycobacterium tuberculosis complex genetic div
-
Brudey, K., Driscoll, J.R., Rigouts, L., Prodinger, W.M., Gori, A., Al-Hajoj, S.A., Allix, C., Aristimuno, L., Arora, J., Baumanis, V., Binder, L., Cafrune, P., Cataldi, A., Cheong, S., Diel, R., Ellermeier, C., Evans, J.T., Fauville-Dufaux, M., Ferdinand, S., Garcia de Viedma, D., Garzelli, C., Gazzola, L., Gomes, H.M., Guttierez, M.C., Hawkey, P.M., van Helden, P.D., Kadival, G.V., Kreiswirth, B.N., Kremer, K., Kubin, M., Kulkarni, S.P., Liens, B., Lillebaek, T., Ho, M.L., Martin, C., Martin, C., Mokrousov, I., Narvskaia, O., Ngeow, Y.F., Naumann, L., Niemann, S., Parwati, I., Rahim, Z., Rasolofo-Razanamparany, V., Rasolonavalona, T., Rossetti, M.L., Rusch-Gerdes, S., Sajduda, A., Samper, S., Shemyakin, I.G., Singh, U.B., Somoskovi, A., Skuce, R.A., van Soolingen, D., Streicher, E.M., Suffys, P.N., Tortoli, E., Tracevska, T., Vincent, V. Victor, T.C. Warren, R.M., Yap, S.F., Zaman, K., Portaels, F., Rastogi, N. and Sola, C. (2006) Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol. 6, 23.
-
-
-
-
5
-
-
4444274596
-
Genotyping, Orientalis-like Yersinia pestis, and plague pandemics
-
Drancourt, M., Roux, V., Dang, L.V., Tran-Hung, L., Castex, D., Chenal-Francisque, V., Ogata, H., Fournier, P-E., Crubézy, E. and Raoult, D. (2004) Genotyping, Orientalis-like Yersinia pestis, and plague pandemics. Emerg. Infect. Dis. 10, 1585-1592.
-
(2004)
Emerg. Infect. Dis
, vol.10
, pp. 1585-1592
-
-
Drancourt, M.1
Roux, V.2
Dang, L.V.3
Tran-Hung, L.4
Castex, D.5
Chenal-Francisque, V.6
Ogata, H.7
Fournier, P.-E.8
Crubézy, E.9
Raoult, D.10
-
6
-
-
1242273715
-
Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims
-
Gilbert, M.T., Cuccui, J., White, W., Lynnerup, N., Titball, R.W., Cooper, A. and Prentice, M.B. (2004) Absence of Yersinia pestis-specific DNA in human teeth from five European excavations of putative plague victims. Microbiology 150, 341-354.
-
(2004)
Microbiology
, vol.150
, pp. 341-354
-
-
Gilbert, M.T.1
Cuccui, J.2
White, W.3
Lynnerup, N.4
Titball, R.W.5
Cooper, A.6
Prentice, M.B.7
-
7
-
-
0036267740
-
Identification of genes that are associated with DNA repeats in prokaryotes
-
Jansen, R., Embden, J.D., Gaastra, W. and Schouls, L.M. (2002) Identification of genes that are associated with DNA repeats in prokaryotes. Mol. Microbiol. 43, 1565-1575.
-
(2002)
Mol. Microbiol
, vol.43
, pp. 1565-1575
-
-
Jansen, R.1
Embden, J.D.2
Gaastra, W.3
Schouls, L.M.4
-
8
-
-
19044366369
-
A tandem repeats database for bacterial genomes: Application to the genotyping of Yersinia pestis and Bacillus anthracis
-
Le Flèche, P., Hauck, Y., Onteniente, L., Prieur, A. Denoeud, F., Ramisse, V., Sylvestre, P., Benson, G. Ramisse, F. and Vergnaud, G. (2001) A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. BMC Microbiol. 1, 2.
-
(2001)
BMC Microbiol
, vol.1
, pp. 2
-
-
Le Flèche, P.1
Hauck, Y.2
Onteniente, L.3
Prieur, A.4
Denoeud, F.5
Ramisse, V.6
Sylvestre, P.7
Benson, G.8
Ramisse, F.9
Vergnaud, G.10
-
9
-
-
33748096466
-
A putative viral defence mechanism in archaeal cells
-
Lillestol, R.K., Redder, P., Garrett, R.A. and Brugger, K. (2006) A putative viral defence mechanism in archaeal cells. Archaea 2, 59-72.
-
(2006)
Archaea
, vol.2
, pp. 59-72
-
-
Lillestol, R.K.1
Redder, P.2
Garrett, R.A.3
Brugger, K.4
-
10
-
-
34248374277
-
-
Makarova, K.S., Grishin, N.V., Shabalina, S.A., Wolf, Y.I. and Koonin, E.V. (2006) A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1, 7.
-
Makarova, K.S., Grishin, N.V., Shabalina, S.A., Wolf, Y.I. and Koonin, E.V. (2006) A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1, 7.
-
-
-
-
11
-
-
16444385662
-
Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
-
Mojica, F.J., Diez-Villasenor, C., Garcia-Martinez, J. and Soria, E. (2005) Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J. Mol. Evol. 60, 174-182.
-
(2005)
J. Mol. Evol
, vol.60
, pp. 174-182
-
-
Mojica, F.J.1
Diez-Villasenor, C.2
Garcia-Martinez, J.3
Soria, E.4
-
12
-
-
4844223197
-
Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis
-
Pourcel, C., Andre-Mazeaud, F., Neubauer, H., Ramisse, F. and Vergnaud, G. (2004) Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol. 4, 22.
-
(2004)
BMC Microbiol
, vol.4
, pp. 22
-
-
Pourcel, C.1
Andre-Mazeaud, F.2
Neubauer, H.3
Ramisse, F.4
Vergnaud, G.5
-
13
-
-
15844390228
-
CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
-
Pourcel, C., Salvignol, G. and Vergnaud, G. (2005) CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. Microbiology 151, 653-663.
-
(2005)
Microbiology
, vol.151
, pp. 653-663
-
-
Pourcel, C.1
Salvignol, G.2
Vergnaud, G.3
-
14
-
-
0842305175
-
Was the Black Death caused by Yersinia pestis?
-
Prentice, M.B., Gilbert, T. and Cooper, A. (2004) Was the Black Death caused by Yersinia pestis? Lancet Infect. Dis. 4, 72.
-
(2004)
Lancet Infect. Dis
, vol.4
, pp. 72
-
-
Prentice, M.B.1
Gilbert, T.2
Cooper, A.3
-
15
-
-
33744911380
-
-
Shapiro, B., Rambaut, A. and Gilbert, M.T. (2006) No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis et al.). Int. J. Infect. Dis. 10, 334-335; author reply 335-336.
-
Shapiro, B., Rambaut, A. and Gilbert, M.T. (2006) No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis et al.). Int. J. Infect. Dis. 10, 334-335; author reply 335-336.
-
-
-
-
16
-
-
5444264410
-
Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans
-
Song, Y., Tong, Z., Wang, J., Wang, L., Guo, Z., Han, Y., Zhang, J., Pei, D., Zhou, D., Qin, H., Pang, X., Zhai, J., Li, M., Cui, B., Qi, Z., Jin, L., Dai, R., Chen, F., Li, S., Ye, C., Du, Z., Lin, W., Yu, J., Yang, H., Huang, P. and Yang, R. (2004) Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans. DNA Res. 11, 179-197.
-
(2004)
DNA Res
, vol.11
, pp. 179-197
-
-
Song, Y.1
Tong, Z.2
Wang, J.3
Wang, L.4
Guo, Z.5
Han, Y.6
Zhang, J.7
Pei, D.8
Zhou, D.9
Qin, H.10
Pang, X.11
Zhai, J.12
Li, M.13
Cui, B.14
Qi, Z.15
Jin, L.16
Dai, R.17
Chen, F.18
Li, S.19
Ye, C.20
Du, Z.21
Lin, W.22
Yu, J.23
Yang, H.24
Huang, P.25
Yang, R.26
more..
-
17
-
-
0037188531
-
Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus
-
Tang, T.H., Bachellerie, J.P., Rozhdestvensky, T., Bortolin, M.L., Huber, H., Drungowski, M., Elge, T., Brosius, J. and Huttenhofer, A. (2002) Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus. Proc. Natl. Acad. Sci. USA 99, 7536-7541.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7536-7541
-
-
Tang, T.H.1
Bachellerie, J.P.2
Rozhdestvensky, T.3
Bortolin, M.L.4
Huber, H.5
Drungowski, M.6
Elge, T.7
Brosius, J.8
Huttenhofer, A.9
-
18
-
-
84991315942
-
Yersinia pestis genotyping
-
author reply 1318-1319
-
Vergnaud, G. (2005) Yersinia pestis genotyping. Emerg. Infect. Dis. 11: 1317-1318; author reply 1318-1319.
-
(2005)
Emerg. Infect. Dis
, vol.11
, pp. 1317-1318
-
-
Vergnaud, G.1
-
19
-
-
5644235022
-
Comparative and evolutionary genomics of Yersinia pestis
-
Zhou, D., Han Y., Song, Y., Huang, P. and Yang, R. (2004a) Comparative and evolutionary genomics of Yersinia pestis. Microbes Infect. 6, 1226-1234.
-
(2004)
Microbes Infect
, vol.6
, pp. 1226-1234
-
-
Zhou, D.1
Han, Y.2
Song, Y.3
Huang, P.4
Yang, R.5
-
20
-
-
3242776180
-
DNA microarray analysis of genome dynamics in Yersinia pestis: Insights into bacterial genome microevolution and niche adaptation
-
Zhou, D., Han, Y., Song, Y., Tong, Z., Wang, J., Guo, Z., Pei, D., Pang, X., Zhai, J., Li, M., Cui, B., Qi, Z., Jin, L., Dai, R., Du, Z., Bao, J., Zhang, X., Yu, J., Wang, J., Huang, P. and Yang, R. (2004b) DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation. J. Bacteriol. 186, 5138-5146.
-
(2004)
J. Bacteriol
, vol.186
, pp. 5138-5146
-
-
Zhou, D.1
Han, Y.2
Song, Y.3
Tong, Z.4
Wang, J.5
Guo, Z.6
Pei, D.7
Pang, X.8
Zhai, J.9
Li, M.10
Cui, B.11
Qi, Z.12
Jin, L.13
Dai, R.14
Du, Z.15
Bao, J.16
Zhang, X.17
Yu, J.18
Wang, J.19
Huang, P.20
Yang, R.21
more..
-
21
-
-
12244277890
-
Characterization of Mycobacterium tuberculosis complex DNAs from Egyptian mummies by spoligotyping
-
Zink, A.R., Sola, C., Reischl, U., Grabner, W., Rastogi, N., Wolf, H. and Nerlich, A.G. (2003) Characterization of Mycobacterium tuberculosis complex DNAs from Egyptian mummies by spoligotyping. J. Clin. Microbiol. 41, 359-367.
-
(2003)
J. Clin. Microbiol
, vol.41
, pp. 359-367
-
-
Zink, A.R.1
Sola, C.2
Reischl, U.3
Grabner, W.4
Rastogi, N.5
Wolf, H.6
Nerlich, A.G.7
|