메뉴 건너뛰기




Volumn 157, Issue 4, 2015, Pages 191-201

Development of a real-time RT-PCR for detection of equine influenza virus;Entwicklung einer real-time RT-PCR zum nachweis von equinem influenzavirus

Author keywords

Diagnosis; Equine influenza virus; MGB probe; Molecular epidemiology; Real time RT PCR

Indexed keywords

AVES; EQUIDAE; EQUINE INFLUENZA VIRUS; INFLUENZA A VIRUS; ORTHOMYXOVIRIDAE; SUS;

EID: 84931331728     PISSN: 00367281     EISSN: 16642848     Source Type: Journal    
DOI: 10.17236/sat00015     Document Type: Article
Times cited : (6)

References (32)
  • 2
    • 77950634257 scopus 로고    scopus 로고
    • Isolation and characterization of highly pathogenic avian influenza virus subtype H5N1 from donkeys
    • Abdel-Moneim A. S., Abdel-Ghany A. E., Shany S. A.: Isolation and characterization of highly pathogenic avian influenza virus subtype H5N1 from donkeys. J.Biomed.Sci. 2010, 17: 25.
    • (2010) J.Biomed.Sci , vol.17 , pp. 25
    • Abdel-Moneim, A.S.1    Abdel-Ghany, A.E.2    Shany, S.A.3
  • 5
    • 84889080547 scopus 로고    scopus 로고
    • Equine influenza - a global perspective
    • Cullinane A., Newton J. R.: Equine influenza - a global perspective. Vet.Microbiol. 2013, 167: 205-214.
    • (2013) Vet.Microbiol , vol.167 , pp. 205-214
    • Cullinane, A.1    Newton, J.R.2
  • 7
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar R. C.: MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 8
    • 67349212226 scopus 로고    scopus 로고
    • Real-time RT-PCR for detection of equine influenza and evaluation using samples from horses infected with A/equine/Sydney/2007 (H3N8)
    • Foord A. J., Selleck P., Colling A., Klippel J., Middleton D., Heine H. G.: Real-time RT-PCR for detection of equine influenza and evaluation using samples from horses infected with A/equine/Sydney/2007 (H3N8). Vet.Microbiol. 2009, 137: 1-9.
    • (2009) Vet.Microbiol , vol.137 , pp. 1-9
    • Foord, A.J.1    Selleck, P.2    Colling, A.3    Klippel, J.4    Middleton, D.5    Heine, H.G.6
  • 9
    • 0034461675 scopus 로고    scopus 로고
    • Detection of influenza A viruses from different species by PCR amplification of conserved sequences in the matrix gene
    • Fouchier R. A., Bestebroer T. M., Herfst S., Van Der Kemp L., Rimmelzwaan G. F., Osterhaus A. D.: Detection of influenza A viruses from different species by PCR amplification of conserved sequences in the matrix gene. J.Clin.Microbiol. 2000, 38: 4096-4101.
    • (2000) J.Clin.Microbiol , vol.38 , pp. 4096-4101
    • Fouchier, R.A.1    Bestebroer, T.M.2    Herfst, S.3    Van Der Kemp, L.4    Rimmelzwaan, G.F.5    Osterhaus, A.D.6
  • 10
    • 34247601707 scopus 로고    scopus 로고
    • Rapid detection of highly pathogenic avian influenza H5N1 virus by TaqMan reverse transcriptase-polymerase chain reaction
    • Heine H. G., Trinidad L., Selleck P., Lowther S.: Rapid detection of highly pathogenic avian influenza H5N1 virus by TaqMan reverse transcriptase-polymerase chain reaction. Avian Dis. 2007, 51: 370-372.
    • (2007) Avian Dis , vol.51 , pp. 370-372
    • Heine, H.G.1    Trinidad, L.2    Selleck, P.3    Lowther, S.4
  • 11
    • 0035559445 scopus 로고    scopus 로고
    • Universal primer set for the full-length amplification of all influenza A viruses
    • Hoffmann E., Stech J., Guan Y., Webster R. G., Perez D. R.: Universal primer set for the full-length amplification of all influenza A viruses. Arch.Virol. 2001, 146: 2275-2289.
    • (2001) Arch.Virol , vol.146 , pp. 2275-2289
    • Hoffmann, E.1    Stech, J.2    Guan, Y.3    Webster, R.G.4    Perez, D.R.5
  • 12
    • 22944457912 scopus 로고    scopus 로고
    • Influenza: Lessons from past pandemics, warnings from current incidents
    • Horimoto T., Kawaoka Y.: Influenza: lessons from past pandemics, warnings from current incidents. Nat.Rev.Microbiol. 2005, 3: 591-600.
    • (2005) Nat.Rev.Microbiol , vol.3 , pp. 591-600
    • Horimoto, T.1    Kawaoka, Y.2
  • 13
    • 34250971354 scopus 로고
    • Beitrag zur kollektiven Behandlung pharmakologischer Reihenversuche
    • Kaerber G.: Beitrag zur kollektiven Behandlung pharmakologischer Reihenversuche. Arch.exp.Pathol.Pharmakol. 1931, 162: 480-487.
    • (1931) Arch.Exp.Pathol.Pharmakol , vol.162 , pp. 480-487
    • Kaerber, G.1
  • 15
    • 68049142320 scopus 로고    scopus 로고
    • Multiple alignment of DNA sequences with MAFFT
    • Katoh K., Asimenos G., Toh H.: Multiple alignment of DNA sequences with MAFFT. Methods Mol.Biol. 2009, 537: 39-64.
    • (2009) Methods Mol.Biol , vol.537 , pp. 39-64
    • Katoh, K.1    Asimenos, G.2    Toh, H.3
  • 19
    • 84897537106 scopus 로고    scopus 로고
    • Identification of Amino Acid Changes That May Have Been Critical for the Genesis of A(H7N9) Influenza Viruses
    • Neumann G., Macken C. A., Kawaoka Y.: Identification of Amino Acid Changes That May Have Been Critical for the Genesis of A(H7N9) Influenza Viruses. J.Virol. 2014, 88: 4877-4896.
    • (2014) J.Virol , vol.88 , pp. 4877-4896
    • Neumann, G.1    Macken, C.A.2    Kawaoka, Y.3
  • 21
    • 0033011029 scopus 로고    scopus 로고
    • A PCR based method for the identification of equine influenza virus from clinical samples
    • Oxburgh L., Hagstrom A.: A PCR based method for the identification of equine influenza virus from clinical samples. Vet.Microbiol. 1999, 67: 161-174.
    • (1999) Vet.Microbiol , vol.67 , pp. 161-174
    • Oxburgh, L.1    Hagstrom, A.2
  • 22
    • 84880512471 scopus 로고    scopus 로고
    • Duration of equine influenza virus shedding and infectivity in immunised horses after experimental infection with EIV A/eq2/Richmond/1/07
    • Paillot R., Prowse L., Montesso F., Stewart B., Jordon L., Newton J. R., Gilkerson J. R.: Duration of equine influenza virus shedding and infectivity in immunised horses after experimental infection with EIV A/eq2/Richmond/1/07. Vet.Microbiol. 2013, 166: 22-34.
    • (2013) Vet.Microbiol , vol.166 , pp. 22-34
    • Paillot, R.1    Prowse, L.2    Montesso, F.3    Stewart, B.4    Jordon, L.5    Newton, J.R.6    Gilkerson, J.R.7
  • 23
    • 26944462001 scopus 로고    scopus 로고
    • Real-time reverse transcription PCR for detection and quantitative analysis of equine influenza virus
    • Quinlivan M., Dempsey E., Ryan F., Arkins S., Cullinane A.: Real-time reverse transcription PCR for detection and quantitative analysis of equine influenza virus. J.Clin.Microbiol. 2005, 43: 5055-5057.
    • (2005) J.Clin.Microbiol , vol.43 , pp. 5055-5057
    • Quinlivan, M.1    Dempsey, E.2    Ryan, F.3    Arkins, S.4    Cullinane, A.5
  • 24
    • 0036708315 scopus 로고    scopus 로고
    • Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes
    • Spackman E., Senne D. A., Myers T. J., Bulaga L. L., Garber L. P., Perdue M. L., Lohman K., Daum L. T., Suarez D. L.: Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes. J.Clin.Microbiol. 2002, 40: 3256-3260.
    • (2002) J.Clin.Microbiol , vol.40 , pp. 3256-3260
    • Spackman, E.1    Senne, D.A.2    Myers, T.J.3    Bulaga, L.L.4    Garber, L.P.5    Perdue, M.L.6    Lohman, K.7    Daum, L.T.8    Suarez, D.L.9
  • 25
    • 84979120254 scopus 로고
    • The method of «right or wrong cases» (constant stimuli) without Gauss›s formulae
    • Spearman C.: The method of «right or wrong cases» (constant stimuli) without Gauss›s formulae. Brit.J.Psychol. 1908, 2: 227-242.
    • (1908) Brit.J.Psychol , vol.2 , pp. 227-242
    • Spearman, C.1
  • 26
    • 0026711010 scopus 로고
    • Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases
    • Tamura K.: Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases. Mol.Biol.Evol. 1992, 9: 678-687.
    • (1992) Mol.Biol.Evol , vol.9 , pp. 678-687
    • Tamura, K.1
  • 27
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S.: MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol.Biol.Evol. 2011, 28: 2731-2739.
    • (2011) Mol.Biol.Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 28
    • 0027692393 scopus 로고
    • Are equine 1 influenza viruses still present in horses?
    • Webster R. G.: Are equine 1 influenza viruses still present in horses? Equine Vet.J. 1993, 25: 537-538.
    • (1993) Equine Vet J , vol.25 , pp. 537-538
    • Webster, R.G.1
  • 30
    • 0026423588 scopus 로고
    • New influenza virus in horses
    • Webster R. G., Guo Y. J.: New influenza virus in horses. Nature 1991, 351: 527.
    • (1991) Nature , vol.351 , pp. 527
    • Webster, R.G.1    Guo, Y.J.2
  • 31
    • 40549109912 scopus 로고    scopus 로고
    • Evaluation of antigen detection kits for diagnosis of equine influenza
    • Yamanaka T., Tsujimura K., Kondo T., Matsumurao T.: Evaluation of antigen detection kits for diagnosis of equine influenza. J.Vet.Med.Sci. 2008, 70: 189-192.
    • (2008) J.Vet.Med.Sci , vol.70 , pp. 189-192
    • Yamanaka, T.1    Tsujimura, K.2    Kondo, T.3    Matsumurao, T.4
  • 32
    • 33746034491 scopus 로고    scopus 로고
    • Evaluation of minor groove binding probe and Taqman probe PCR assays: Influence of mismatches and template complexity on quantification
    • Yao Y., Nellaker C., Karlsson H.: Evaluation of minor groove binding probe and Taqman probe PCR assays: Influence of mismatches and template complexity on quantification. Mol.Cell.Probes 2006, 20: 311-316.
    • (2006) Mol.Cell.Probes , vol.20 , pp. 311-316
    • Yao, Y.1    Nellaker, C.2    Karlsson, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.