Inputs for subject-specific computational fluid dynamics simulation of blood flow in the mouse aorta

Journal of Biomechanical Engineering

Volumn 136, Issue 10, 2014, Pages

  Doormaal, Mark Van ^a   Zhou, Yu Qing ^a   Zhang, Xiaoli ^a   Steinman, David A ^b   Henkelman, R Mark ^a  

^a HOSPITAL FOR SICK CHILDREN   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

Author keywords

CFD; microCT; mouse aorta; MRI; RRT; subject specific; ultrasound

Indexed keywords

BLOOD VESSELS; COMPUTATIONAL FLUID DYNAMICS; HEMODYNAMICS; MAGNETIC RESONANCE IMAGING; MAMMALS; RESIDENCE TIME DISTRIBUTION; ULTRASONICS;

ATHEROSCLEROTIC LESIONS; COMPUTATIONAL FLUID DYNAMICS SIMULATIONS; MICRO CT; MICROCOMPUTED TOMOGRAPHY; MOUSE AORTA; RRT; SUBJECT-SPECIFIC; TEMPORAL CHARACTERISTICS;

COMPUTERIZED TOMOGRAPHY;

ABDOMINAL AORTA; ANIMAL EXPERIMENT; AORTA; AORTA ARCH; AORTA FLOW; ARTICLE; ASCENDING AORTA; BLOOD VESSEL DIAMETER; CALCULATION; COMPUTATIONAL FLUID DYNAMICS; COMPUTED TOMOGRAPHY SCANNER; DESCENDING AORTA; ECHOGRAPHY; EXPERIMENTAL MODEL; IMAGING; M MODE ECHOGRAPHY; MICRO-COMPUTED TOMOGRAPHY; MOUSE; NONHUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; PHASE CONTRAST MAGNETIC RESONANCE IMAGING; RELATIVE RESIDENCE TIME; SIMULATION; STATISTICAL PARAMETERS; THORACIC AORTA; WAVEFORM; ANIMAL; BIOLOGICAL MODEL; HEMODYNAMICS; HYDRODYNAMICS; IMAGE PROCESSING; PHYSIOLOGY;

ANIMALS; AORTA; AORTA, THORACIC; HEMODYNAMICS; HYDRODYNAMICS; IMAGE PROCESSING, COMPUTER-ASSISTED; MICE; MODELS, CARDIOVASCULAR;

EID: 84930762076     PISSN: 01480731     EISSN: 15288951     Source Type: Journal    
DOI: 10.1115/1.4028104     Document Type: Article

References (18)

1. Zhou, Y. Q., Zhu, S. N., Foster, F. S., Cybulsky, M. I., and Henkelman, R. M., 2010, "Aortic Regurgitation Dramatically Alters the Distribution of Atherosclerotic Lesions and Enhances Atherogenesis in Mice," Arterioscler. Thromb. Vasc. Biol., 30(6), pp. 1181-1188.
2. Hoi, Y., Zhou, Y. Q., Zhang, X., Henkelman, R. M., and Steinman, D. A., 2011, "Correlation Between Local Hemodynamics and Lesion Distribution in a Novel Aortic Regurgitation Murine Model of Atherosclerosis," Ann. Biomed. Eng., 39(5), pp. 1414-1422.
3. Sharpe, J., Ahlgren, U., Perry, P., Hill, B., Ross, A., Hecksher-Sorensen, J., Baldock, R., and Davidson, D., 2002, "Optical Projection Tomography as a Tool for 3D Microscopy and Gene Expression Studies," Science, 296(5567), pp. 541-545. (Pubitemid 34408675)
4. Wong, M. D., Dazai, J., Walls, J. R., Gale, N. W., and Henkelman, R. M., 2013, "Design and Implementation of a Custom Built Optical Projection Tomography System," PLoS One, 8(9), p. e73491.
5. Van Doormaal, M. A., Kazakidi, A., Wylezinska, M., Hunt, A., Tremoleda, J. L., Protti, A., Bohraus, Y., Gsell, W., Weinberg, P. D., and Ethier, C. R., 2012, "Haemodynamics in the Mouse Aortic Arch Computed From MRI-Derived Velocities at the Aortic Root," J. R. Soc. Interface, 9(76), pp. 2834-2844.
6. Feintuch, A., Ruengsakulrach, P., Lin, A., Zhang, J., Zhou, Y. Q., Bishop, J., Davidson, L., Courtman, D., Foster, F. S., Steinman, D. A., Henkelman, R. M., and Ethier, C. R., 2007, "Hemodynamics in the Mouse Aortic Arch as Assessed by MRI, Ultrasound, and Numerical Modeling," Am. J. Physiol. Heart Circ. Physiol., 292(2), pp. H884-892.
7. Suo, J., Ferrara, D. E., Sorescu, D., Guldberg, R. E., Taylor, W. R., and Giddens, D. P., 2007, "Hemodynamic Shear Stresses in Mouse Aortas: Implications for Atherogenesis," Arterioscler. Thromb. Vasc. Biol., 27(2), pp. 346-351. (Pubitemid 46143050)
8. Vandeghinste, B., 2011, "Replacing Vascular Corrosion Casting by in Vivo Micro-CT Imaging for Building 3D Cardiovascular Models in Mice," Mol. Imaging Biol., 13(1), pp. 78-86.
9. Greve, J. M., Les, A. S., Tang, B. T., Draney Blomme, M. T., Wilson, N. M., Dalman, R. L., Pelc, N. J., and Taylor, C. A., 2006, "Allometric Scaling of Wall Shear Stress From Mice to Humans: Quantification Using Cine Phase-Contrast MRI and Computational Fluid Dynamics," Am. J. Physiol. Heart Circ. Physiol., 291(4), pp. H1700-1708. (Pubitemid 44497675)
10. Feintuch, A., Zhu, Y., Bishop, J., Davidson, L., Dazai, J., Bruneau, B. G., and Henkelman, R. M., 2007, "4D Cardiac MRI in the Mouse," NMR Biomed., 20(3), pp. 360-365. (Pubitemid 46824536)
11. Zhou, Y. Q., Davidson, L., Henkelman, R. M., Nieman, B. J., Foster, F. S., Yu, L. X., and Chen, X. J., 2004, "Ultrasound-Guided Left-Ventricular Catheterization: A Novel Method of Whole Mouse Perfusion for Microimaging," Lab. Invest., 84(3), pp. 385-389. (Pubitemid 41656494)
12. Hoi, Y., Van Doormaal, M., Zhou, Y.-Q., Zhang, X., Henkelman, R. M., and Steinman, D. A., 2011, "Degree of Retrograde Flow and Its Effects on Local Hemodynamics and Plaque Distribution in an Aortic Regurgitation Mouse Model of Atherosclerosis," ASME Paper No. SBC2011-53161.
13. Trachet, B., Bols, J., De Santis, G., Vandenberghe, S., Loeys, B., and Segers, P., 2011, "The Impact of Simplified Boundary Conditions and Aortic Arch Inclusion on CFD Simulations in the Mouse Aorta: A Comparison With Mouse-Specific Reference Data," ASME J. Biomech. Eng., 133(12), p. 121006.
14. Minev, P. D., 1998, "A Characteristic/Finite Element Algorithm for the 3-D Navier-Stokes Equations Using Unstructured Grids," Comput. Methods Appl. Mech. Eng., 178(1), pp. 39-50.
15. Lee, S. W., Antiga, L., and Steinman, D. A., 2009, "Correlations Among Indicators of Disturbed Flow at the Normal Carotid Bifurcation," ASME J. Biomech. Eng., 131(6), p. 061013.
16. Himburg, H. A., Grzybowski, D. M., Hazel, A. L., LaMack, J. A., Li, X. M., and Friedman, M. H., 2004, "Spatial Comparison Between Wall Shear Stress Measures and Porcine Arterial Endothelial Permeability," Am. J. Physiol. Heart Circ. Physiol., 286(5), pp. H1916-1922. (Pubitemid 38525482)
17. Dean, W. R., 1927, "Note on the Motion of Fluid in a Curved Pipe," Philos. Mag., 4(20), pp. 208-223.
18. Moore, J. A., Rutt, B. K., Karlik, S. J., Yin, K., and Ethier, C. R., 1999, "Computational Blood Flow Modeling Based on In Vivo Measurements," Ann. Biomed. Eng., 27(5), pp. 627-640. (Pubitemid 129586494)