Differentially expressed genes in aortic smooth muscle cells from atherosclerosis-susceptible and atherosclerosis-resistant pigeons

Poultry Science

Volumn 91, Issue 6, 2012, Pages 1315-1325

  Anderson, J L ^a   Taylor, Jr ^a   Smith, E C ^a   Thomas, W K ^a   Smith, S C ^a  

^a UNIVERSITY OF NEW HAMPSHIRE   (United States)

Author keywords

Columba livia; Gene expression; Representational difference analysis; Spontaneous atherogenesis

Indexed keywords

COLUBER; COLUMBA; COLUMBA LIVIA;

EID: 84930542215     PISSN: 00325791     EISSN: 15253171     Source Type: Journal    
DOI: 10.3382/ps.2011-01975     Document Type: Article

References (57)

1. Archacki, S. R., G. Angheloiu, X. L. Tian, F. L. Tan, N. DiPaola, G. Q. Shen, C. Moravec, S. Ellis, E. J. Topol, and Q. Wang. 2003. Identification of new genes differentially expressed in coronary artery disease by expression profiling. Physiol. Genomics 15:65-74.
2. Arnett, D. K., A. E. Baird, R. A. Barkley, C. T. Basson, and E. Boer-winckle. 2007. Relevance of genetics and genomics for prevention and treatment of cardiovascular disease: A scientific statement from the American Heart Association council on epidemiology and prevention, the stroke council, and the functional genomics and translational biology interdisciplinary working group. Circulation 115:2878-2901.
3. Bassiouny, H. S., C. Zarins, M. Kadowaki, and S. Glagov. 1994. Hemodynamic stress and experimental aortoiliac atherosclerosis. J. Vasc. Surg. 19:426-434.
4. Berne, R. M., M. N. Levy, and B. M. Koeppen. 2004. Physiology. 5th ed. Mosby, St. Louis, MO.
5. Boyd, C. D., J. Y. Song, A. C. Kniep, H. S. Park, and C. Fastnacht. 1991. A restriction length polymorphism in the pigeon pro alpha 2(1) collagen gene: Lack of allelic association with an atherogenic phenotype in pigeons genetically susceptible to the development of spontaneous atherosclerosis. Connect. Tissue Res. 26:187-197.
6. Clarkson, T. B., R. W. Prichard, M. G. Netsky, and H. B. Lofland. 1959. Atherosclerosis in pigeons: Its spontaneous occurrence and resemblance to human atherosclerosis. AMA Arch. Pathol. 68:143-147.
7. Cooke, P. H., and S. C. Smith. 1968. Smooth muscle cells: Source of foam cells in atherosclerotic White Carneau pigeons. Exp. Mol. Pathol. 8:171-189.
8. Cornhill, J. F., M. J. Levesque, and R. M. Nerem. 1980. Quantitative study of the localization of sudanophilic coeliac lesions in the White Carneau pigeon. Atherosclerosis 35:103-110.
9. Edwards, I. J., and W. D. Wagner. 1988. Distinct synthetic and structural characteristics of proteoglycans produced by cultured artery smooth muscle cells of atherosclerosis-susceptible pigeons. J. Biol. Chem. 263:9612-9620.
10. Everts, R. E., S. Versteeg, C. Renier, F. Vignaux, and P. C. Groot. 2000. Isolation of DNA markers informative in purebred dog families by genomic representational difference analysis (gRDA). Mamm. Genome 11:741-747.
11. Feng, Y., J. H. Yang, H. Huang, S. P. Kennedy, T. G. Turi, J. F. Thompson, P. Libby, and R. T. Lee. 1999. Transcriptional profile of mechanically induced genes in human vascular smooth muscle cells. Circ. Res. 85:1118-1123.
12. Gizard, F., C. Amant, O. Barbier, S. Bellosta, R. Robillard, F. Per-cevault, H. Sevestre, P. Krimpenfort, A. Corsini, J. Rochette, C. Glineur, J. C. Fruchart, G. Torpier, and B. Staels. 2005. PPARα inhibits vascular smooth muscle cell proliferation underlying intimal hyperplasia by inducing the tumor suppressor p16INK4a. J. Clin. Invest. 115:3228-3238.
13. Guo, F., C. Zarella, and W. D. Wagner. 2006. STAT4 and the proliferation of artery smooth muscle cells in atherosclerosis. Exp. Mol. Pathol. 81:15-22.
14. Gurr, M. I. 1992. Dietary lipids and coronary heart disease: Old evidence, new perspective. Prog. Lipid Res. 31:195-243.
15. Hajjar, D. P., I. Farber, and S. C. Smith. 1988. Oxygen tension within the arterial wall: Relationship to altered bioenergetic metabolism and lipid accumulation. Arch. Biochem. Biophys. 262:375-380.
16. Hajjar, D. P., and S. C. Smith. 1980. Focal differences in bioenergetic metabolism of atherosclerosis-susceptible and -resistant pigeon aortas. Atherosclerosis 36:209-222.
17. Hansen, J. 1977. Spontaneous atherosclerosis: An ultrastructural study in the White Carneau pigeon. Virchows Arch. A Pathol. Anat. Histol. 375:147-157.
18. Hiltunen, M. O., M. P. Turunen, T. P. Häkkinen, J. Rutanen, M. Hedman, K. Mäkinen, A. Turunen, K. Aalto-Setalä, and S. Ylä-Herttuala. 2002. DNA hypomethylation and methyltransferase expression in atherosclerotic lesions. Vasc. Med. 7:5-11.
19. Hubank, M., and D. G. Schatz. 1994. Identifying differences in mRNA expression by representational difference analysis of cDNA. Nucleic Acids Res. 22:5640-5648.
20. Kanehisa, M., S. Goto, M. Hattori, K. F. Aoki-Kinoshita, and M. Itoh. 2006. From genomics to chemical genomics: New developments in KEGG. Nucleic Acids Res. 34:D354-D357.
21. Kim, J. W., and C. Dang. 2005. Multifaceted roles of glycolytic enzymes. Trends Biochem. Sci. 30:142-150.
22. Kjaernes, M., A. Svindland, L. Walloe, and S. Wille. 1981. Localization of early atherosclerotic lesions in an arterial bifurcation in humans. Acta Pathol. Microbiol. Scand. A 89:35-40.
23. Kuykindoll, R. J., H. Nishimura, D. Thomason, and S. Nishimoto. 2000. Osteopontin expression in spontaneously developed neointima in fowl (Gallus gallus). J. Exp. Biol. 203:273-282.
24. Lisitsyn, N., N. Lisitsyn, and M. Wigler. 1993. Cloning the differences between two complex genomes. Science 259:946-951.
25. Loscalzo, J. 2004. Molecular Mechanisms of Atherosclerosis. Taylor and Francis, New York, NY.
26. Löw, P., R. A. Hastings, S. P. Dawson, M. Sass, M. A. Billett, R. J. Mayer, and S. E. Reynolds. 2000. Localization of 26S proteasomes with different subunit composition in insect muscles undergoing programmed cell death. Cell Death Differ. 7:1210-1217.
27. M. H. Maoghdasian, J. J. Frohlich, and B. M. McManus. 2001. Advances in experimental dyslipidemia and atherosclerosis. Lab. Invest. 81:1173-1183.
28. Nikitin, A., S. Egorov, N. Daraselia, and I. Mazo. 2003. Pathway studio-The analysis and navigation of molecular networks. Bio-informatics 19:2155-2157.
29. O'Hara, E. F., M. B. Williams, L. Rott, P. Abola, N. Hansen, T. Jones, M. R. Gurjal, N. Federspiel, and E. C. Butcher. 2005. Modified representational difference analysis: Isolation of differentially expressed mRNAs from rare cell populations. Anal. Biochem. 336:221-230.
30. Onda, M., T. Ishiwata, K. Kawahara, R. Wang, and Z. Naito. 2002. Expression of lumican in thickened intima and smooth muscle cells in human coronary atherosclerosis. Exp. Mol. Pathol. 72:142-149.
31. Owens, G. K., S. Vernon, and C. Madsen. 1996. Molecular regulation of smooth muscle cell differentiation. J. Hypertens. Suppl. 14:S55-S64.
32. Owens, G. K. 1996. Role of alterations in the differentiated state of smooth muscle cell in atherogenesis. Pages 401-420 in Atherosclerosis and Coronary Artery Disease. V. Fuster, R. Ross, and E. Topol, ed. Lippincott-Raven, Philadelphia, PA.
33. Owens, G. K., M. S. Kumar, and B. R. Wamhoff. 2004. Molecular regulation of vascular smooth muscle cell differentiation in development and disease. Physiol. Rev. 84:767-801.
34. Pastorian, K., L. Hawel, and C. Byus. 2000. Optimization of cDNA representational difference analysis for the identification of differentially expressed mRNAs. Anal. Biochem. 283:89-98.
35. Prichard, R. W., T. B. Clarkson, H. Goodman, and H. Lofland. 1964. Aortic atherosclerosis in pigeons and its complications. Arch. Pathol. 77:244-257.
36. Ridker, P. 2000. New clue to an old killer: Inflammation and heart disease. Nutrition Action 27:3-5.
37. Rong, J. X., M. Shapiro, E. Trogan, and E. A. Fisher. 2003. Trans-differentiation of mouse aortic smooth muscle cells to a macro-phage-like state after cholesterol loading. Proc. Natl. Acad. Sci. USA 100:13531-13536.
38. Santerre, R. F., T. N. Wight, S. C. Smith, and D. Brannigan. 1972. Spontaneous atherosclerosis in pigeons. A model system for studying metabolic parameters associated with atherogenesis. Am. J. Pathol. 67:1-22.
39. Schwartz, S. M., G. Campbell, and J. Campbell. 1986. Replication of smooth muscle cells in vascular disease. Circ. Res. 58:427-444.
40. Shanahan, C. M., and P. L. Weissberg. 1998. Smooth muscle cell heterogeneity: Patterns of gene expression in vascular smooth muscle cells in vitro and in vivo. Arterioscler. Thromb. Vasc. Biol. 18:333-338.
41. Smith, S. C., E. C. Smith, M. L. Gilman, J. L. Anderson, and R. L. Taylor Jr. 2008. Differentially expressed soluble proteins in aortic cells from atherosclerosis-susceptible and resistant pigeons. Poult. Sci. 87:1328-1334.
42. Smith, S. C., E. C. Smith, and R. L. Taylor Jr. 2001. Susceptibility to spontaneous atherosclerosis in pigeons: An autosomal recessive trait. J. Hered. 92:439-442.
43. Smith, S. C., R. G. Strout, W. R. Dunlop, and E. C. Smith. 1965. Fatty acid composition of cultured aortic smooth muscle cells from White Carneau and Show Racer pigeons. J. Atheroscler. Res. 5:379-387.
44. St. Clair, R. W. 1998. The contribution of avian models to our understanding of atherosclerosis and their promise for the future. Lab. Anim. Sci. 48:565-568.
45. St. Clair, R. W., M. Leight, and H. Barakat. 1986. Metabolism of low density lipoproteins by pigeon skin fibroblasts and aortic smooth muscle cells: Comparison of cells from atherosclerosis-susceptible and atherosclerosis-resistant pigeons. Arteriosclerosis 6:170-177.
46. Troup, S., N. Njue, E. V. Kliewer, M. Parisien, and C. Roskelley. 2003. Reduced expression of the small leucinerich proteoglycans, lumican and decorin is associated with poor outcome in node-negative invasive breast cancer. Clin. Cancer Res. 9:207-214.
47. Tyson, K. L., and C. M. Shanahan. 2000. Use of cDNA representational difference analysis to identify disease specific genes in human atherosclerosis. Pages 83-98 in Methods in Molecular Medicine. A. H. Baker, ed. Humana Press, Clifton, NJ.
48. Unneberg, P., A. Wennborg, and M. Larsson. 2003. Transcript identification by analysis of short sequence tags-Influence of tag length, restriction site and transcript database. Nucleic Acids Res. 31:2217-2226.
49. Wagner, W. D. 1978. Risk factors in pigeons genetically selected for increased atherosclerosis susceptibility. Atherosclerosis 31:453-463.
50. Wagner, W. D., T. B. Clarkson, M. A. Feldner, and R. W. Prichard. 1973. The development of pigeon strains with selected atherosclerosis characteristics. Exp. Mol. Pathol. 19:304-319.
51. Wagner, W. D., F. Guo, and M. Jokinen. 2007. Artery regional properties and atherosclerosis susceptibility. Life Sci. 80:299-306.
52. Wang, J., D. L. Adelson, A. Yilmaz, S. H. Sze, Y. Jin, and J. L. Zhu. 2005. Genomic organization, annotation, and ligand-receptor inferences of chicken chemokines and chemokine receptor genes based on comparative genomics. BMC Genomics 6:45.
53. Weiss, J. N., L. Yang, and Z. Qu. 2006. Systems biology approaches to metabolic and cardiovascular disorders: Network perspectives of cardiovascular metabolism. J. Lipid Res. 47:2355-2366.
54. Wellcome Trust. 2007. Case control consortium: Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 447:661-678.
55. Wight, T. N., P. Cooke, and S. C. Smith. 1977. An electron microscopic study of pigeon aorta cell cultures: Cytodifferentiation and intracellular lipid accumulation. Exp. Mol. Pathol. 27:1-18.
56. Wight, T. N., and M. J. Merrilees. 2004. Proteoglycans in atherosclerosis and restenosis: Key roles for versican. Circ. Res. 94:1158-1167.
57. Zemplenyi, T., and A. Rosenstein. 1975. Arterial enzymes and their relation to atherosclerosis in pigeons. Exp. Mol. Pathol. 22:225-241.