메뉴 건너뛰기




Volumn 42, Issue 1, 2015, Pages 71-83

Deviations in human gut microbiota: A novel diagnostic test for determining dysbiosis in patients with IBS or IBD

Author keywords

[No Author keywords available]

Indexed keywords

ACTINOBACTERIA; ADOLESCENT; ADULT; AGED; ANALYZER; ARTICLE; BACTEROIDETES; COMPUTER MODEL; CONTROLLED STUDY; CROHN DISEASE; DEEP SEQUENCING; DIAGNOSTIC KIT; DIAGNOSTIC TEST ACCURACY STUDY; DIAGNOSTIC VALUE; DNA PROBE; DYSBIOSIS; FECES ANALYSIS; FEMALE; FIRMICUTES; GA MAP DYSBIOSIS TEST; HUMAN; IN VITRO STUDY; INFLAMMATORY BOWEL DISEASE; INSTRUMENT VALIDATION; INTERMETHOD COMPARISON; INTESTINE FLORA; IRRITABLE COLON; MAJOR CLINICAL STUDY; MALE; MOLLICUTES; POLYMERASE CHAIN REACTION; POPULATION ABUNDANCE; PRIORITY JOURNAL; PROCESS DEVELOPMENT; PROTEOBACTERIA; REMISSION; SEQUENCE ANALYSIS; ULCERATIVE COLITIS; VERRUCOMICROBIA; BACTERIUM; DIAGNOSTIC TEST; FECES; ISOLATION AND PURIFICATION; MICROBIOLOGY; MIDDLE AGED; NORWAY; PROCEDURES; VALIDATION STUDY; YOUNG ADULT;

EID: 84930486219     PISSN: 02692813     EISSN: 13652036     Source Type: Journal    
DOI: 10.1111/apt.13236     Document Type: Article
Times cited : (219)

References (40)
  • 1
    • 85027927719 scopus 로고    scopus 로고
    • Enterotypes of the human gut microbiome
    • Arumugam M, Raes J, Pelletier E, et al,. Enterotypes of the human gut microbiome. Nature 2011; 473: 174-80.
    • (2011) Nature , vol.473 , pp. 174-180
    • Arumugam, M.1    Raes, J.2    Pelletier, E.3
  • 2
    • 79951811014 scopus 로고    scopus 로고
    • Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach
    • Sekelja M, Berget I, Naes T, Rudi K,. Unveiling an abundant core microbiota in the human adult colon by a phylogroup-independent searching approach. ISME J 2011; 5: 519-31.
    • (2011) ISME J , vol.5 , pp. 519-531
    • Sekelja, M.1    Berget, I.2    Naes, T.3    Rudi, K.4
  • 3
    • 84900535804 scopus 로고    scopus 로고
    • Dynamics and associations of microbial community types across the human body
    • Ding T, Schloss PD,. Dynamics and associations of microbial community types across the human body. Nature 2014; 509: 357-60.
    • (2014) Nature , vol.509 , pp. 357-360
    • Ding, T.1    Schloss, P.D.2
  • 4
    • 33845901507 scopus 로고    scopus 로고
    • Microbial ecology: Human gut microbes associated with obesity
    • Ley RE, Turnbaugh PJ, Klein S, Gordon JI,. Microbial ecology: human gut microbes associated with obesity. Nature 2006; 444: 1022-3.
    • (2006) Nature , vol.444 , pp. 1022-1023
    • Ley, R.E.1    Turnbaugh, P.J.2    Klein, S.3    Gordon, J.I.4
  • 5
    • 30944466824 scopus 로고    scopus 로고
    • Reduced diversity of faecal microbiota in Cohn's disease revealed by a metagenomic approach
    • Manichanh C, Rigottier-Gois L, Bonnaud E, et al,. Reduced diversity of faecal microbiota in Cohn's disease revealed by a metagenomic approach. Gut 2006; 55: 205-11.
    • (2006) Gut , vol.55 , pp. 205-211
    • Manichanh, C.1    Rigottier-Gois, L.2    Bonnaud, E.3
  • 6
    • 77949393654 scopus 로고    scopus 로고
    • Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
    • Larsen N, Vogensen FK, van den Berg FW, et al,. Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. PLoS ONE 2010; 5: e9085.
    • (2010) PLoS ONE , vol.5 , pp. e9085
    • Larsen, N.1    Vogensen, F.K.2    Van Den Berg, F.W.3
  • 7
    • 84898809123 scopus 로고    scopus 로고
    • The microbiome in inflammatory bowel disease: Current status and the future ahead
    • Kostic AD, Xavier RJ, Gevers D,. The microbiome in inflammatory bowel disease: current status and the future ahead. Gastroenterology 2014; 146: 1489-99.
    • (2014) Gastroenterology , vol.146 , pp. 1489-1499
    • Kostic, A.D.1    Xavier, R.J.2    Gevers, D.3
  • 8
    • 84896825642 scopus 로고    scopus 로고
    • Unraveling the ties between irritable bowel syndrome and intestinal microbiota
    • Hong SN, Rhee PL,. Unraveling the ties between irritable bowel syndrome and intestinal microbiota. World J Gastroenterol 2014; 20: 2470-81.
    • (2014) World J Gastroenterol , vol.20 , pp. 2470-2481
    • Hong, S.N.1    Rhee, P.L.2
  • 9
    • 63849116466 scopus 로고    scopus 로고
    • Methodology and indications of H2-breath testing in gastrointestinal diseases: The Rome Consensus Conference
    • Gasbarrini A, Corazza GR, Gasbarrini G, et al,. Methodology and indications of H2-breath testing in gastrointestinal diseases: the Rome Consensus Conference. Aliment Pharmacol Ther 2009; 29 (Suppl 1): 1-49.
    • (2009) Aliment Pharmacol Ther , vol.29 , pp. 1-49
    • Gasbarrini, A.1    Corazza, G.R.2    Gasbarrini, G.3
  • 11
    • 84871120114 scopus 로고    scopus 로고
    • Intestinal microbiota in functional bowel disorders: A Rome foundation report
    • Simren M, Barbara G, Flint HJ, et al,. Intestinal microbiota in functional bowel disorders: a Rome foundation report. Gut 2013; 62: 159-76.
    • (2013) Gut , vol.62 , pp. 159-176
    • Simren, M.1    Barbara, G.2    Flint, H.J.3
  • 12
    • 70449710320 scopus 로고    scopus 로고
    • Small intestinal bacterial overgrowth in irritable bowel syndrome: Systematic review and meta-analysis
    • Ford AC, Spiegel BM, Talley NJ, Moayyedi P,. Small intestinal bacterial overgrowth in irritable bowel syndrome: systematic review and meta-analysis. Clin Gastroenterol Hepatol 2009; 7: 1279-86.
    • (2009) Clin Gastroenterol Hepatol , vol.7 , pp. 1279-1286
    • Ford, A.C.1    Spiegel, B.M.2    Talley, N.J.3    Moayyedi, P.4
  • 13
    • 78049496695 scopus 로고    scopus 로고
    • Gastrointestinal microbiota in irritable bowel syndrome: Present state and perspectives
    • Salonen A, de Vos WM, Palva A,. Gastrointestinal microbiota in irritable bowel syndrome: present state and perspectives. Microbiology 2010; 156: 3205-15.
    • (2010) Microbiology , vol.156 , pp. 3205-3215
    • Salonen, A.1    De Vos, W.M.2    Palva, A.3
  • 14
    • 50249169511 scopus 로고    scopus 로고
    • The small intestinal bacterial overgrowth. Irritable bowel syndrome hypothesis: Implications for treatment
    • Vanner S,. The small intestinal bacterial overgrowth. Irritable bowel syndrome hypothesis: implications for treatment. Gut 2008; 57: 1315-21.
    • (2008) Gut , vol.57 , pp. 1315-1321
    • Vanner, S.1
  • 15
    • 78649883215 scopus 로고    scopus 로고
    • IS-pro: High-throughput molecular fingerprinting of the intestinal microbiota
    • Budding AE, Grasman ME, Lin F, et al,. IS-pro: high-throughput molecular fingerprinting of the intestinal microbiota. FASEB J 2010; 24: 4556-64.
    • (2010) FASEB J , vol.24 , pp. 4556-4564
    • Budding, A.E.1    Grasman, M.E.2    Lin, F.3
  • 16
    • 84890069587 scopus 로고    scopus 로고
    • Dominant fecal microbiota in newly diagnosed untreated inflammatory bowel disease patients
    • Thorkildsen LT, Nwosu FC, Avershina E, et al,. Dominant fecal microbiota in newly diagnosed untreated inflammatory bowel disease patients. Gastroenterol Res Pract 2013; 2013: 636785.
    • (2013) Gastroenterol Res Pract , vol.2013 , pp. 636785
    • Thorkildsen, L.T.1    Nwosu, F.C.2    Avershina, E.3
  • 17
    • 84902150181 scopus 로고    scopus 로고
    • Alterations in the intestinal microbiome (dysbiosis) as a predictor of relapse after infliximab withdrawal in Cohn's disease
    • Rajca S, Grondin V, Louis E, et al,. Alterations in the intestinal microbiome (dysbiosis) as a predictor of relapse after infliximab withdrawal in Cohn's disease. Inflamm Bowel Dis 2014; 20: 978-86.
    • (2014) Inflamm Bowel Dis , vol.20 , pp. 978-986
    • Rajca, S.1    Grondin, V.2    Louis, E.3
  • 18
    • 84873038467 scopus 로고    scopus 로고
    • Fecal microbiota transplantation - An old therapy comes of age
    • Kelly CP,. Fecal microbiota transplantation-an old therapy comes of age. N Engl J Med 2013; 368: 474-5.
    • (2013) N Engl J Med , vol.368 , pp. 474-475
    • Kelly, C.P.1
  • 19
    • 84902097383 scopus 로고    scopus 로고
    • Ehealth monitoring in irritable bowel syndrome patients treated with low fermentable oligo-, di-, mono-saccharides and polyols diet
    • Pedersen N, Vegh Z, Burisch J, et al,. Ehealth monitoring in irritable bowel syndrome patients treated with low fermentable oligo-, di-, mono-saccharides and polyols diet. World J Gastroenterol 2014; 20: 6680-4.
    • (2014) World J Gastroenterol , vol.20 , pp. 6680-6684
    • Pedersen, N.1    Vegh, Z.2    Burisch, J.3
  • 20
    • 85044552330 scopus 로고    scopus 로고
    • Gut microbiota in IBD patients with IBS before and after 6 weeks of low FODMAP diet
    • Pedersen N, Vinding K, Vegh Z, et al,. Gut microbiota in IBD patients with IBS before and after 6 weeks of low FODMAP diet. Gastroenterology 2014; 146: S-241.
    • (2014) Gastroenterology , vol.146 , pp. S-241
    • Pedersen, N.1    Vinding, K.2    Vegh, Z.3
  • 21
    • 84883473232 scopus 로고    scopus 로고
    • Synbiotic consumption changes the metabolism and composition of the gut microbiota in older people and modifies inflammatory processes: A randomised, double-blind, placebo-controlled crossover study
    • Macfarlane S, Cleary S, Bahrami B, Reynolds N, Macfarlane GT,. Synbiotic consumption changes the metabolism and composition of the gut microbiota in older people and modifies inflammatory processes: a randomised, double-blind, placebo-controlled crossover study. Aliment Pharmacol Ther 2013; 38: 804-16.
    • (2013) Aliment Pharmacol Ther , vol.38 , pp. 804-816
    • Macfarlane, S.1    Cleary, S.2    Bahrami, B.3    Reynolds, N.4    Macfarlane, G.T.5
  • 22
    • 79961113106 scopus 로고    scopus 로고
    • Temporal development of the infant gut microbiota in immunoglobulin E-sensitized and nonsensitized children determined by the GA-map infant array
    • Vebø HC, Sekelja M, Nestestog R, et al,. Temporal development of the infant gut microbiota in immunoglobulin E-sensitized and nonsensitized children determined by the GA-map infant array. Clin Vaccine Immunol 2011; 18: 1326-35.
    • (2011) Clin Vaccine Immunol , vol.18 , pp. 1326-1335
    • Vebø, H.C.1    Sekelja, M.2    Nestestog, R.3
  • 23
    • 0027967514 scopus 로고
    • RNA/DNA hybrid duplexes with identical nearest-neighbor base-pairs have identical stability
    • Sugimoto N, Katoh M, Nakano S, Ohmichi T, Sasaki M,. RNA/DNA hybrid duplexes with identical nearest-neighbor base-pairs have identical stability. FEBS Lett 1994; 354: 74-8.
    • (1994) FEBS Lett , vol.354 , pp. 74-78
    • Sugimoto, N.1    Katoh, M.2    Nakano, S.3    Ohmichi, T.4    Sasaki, M.5
  • 26
    • 0010233038 scopus 로고    scopus 로고
    • 50-50 multivariate analysis of variance for collinear responses
    • Langsrud Ø,. 50-50 multivariate analysis of variance for collinear responses. J R Stat Soc Ser D 2002; 51: 305-17.
    • (2002) J R Stat Soc ser D , vol.51 , pp. 305-317
    • Langsrud Ø1
  • 27
    • 84904411548 scopus 로고    scopus 로고
    • Correlation between the human fecal microbiota and depression
    • Naseribafrouei A, Hestad K, Avershina E, et al,. Correlation between the human fecal microbiota and depression. Neurogastroenterol Motil 2014; 26: 1155-62.
    • (2014) Neurogastroenterol Motil , vol.26 , pp. 1155-1162
    • Naseribafrouei, A.1    Hestad, K.2    Avershina, E.3
  • 28
    • 44849128805 scopus 로고    scopus 로고
    • Species divergence and the measurement of microbial diversity
    • Lozupone CA, Knight R,. Species divergence and the measurement of microbial diversity. FEMS Microbiol Rev 2008; 32: 557-78.
    • (2008) FEMS Microbiol Rev , vol.32 , pp. 557-578
    • Lozupone, C.A.1    Knight, R.2
  • 30
    • 84861578319 scopus 로고    scopus 로고
    • An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota
    • Jeffery IB, O'Toole PW, Ohman L, et al,. An irritable bowel syndrome subtype defined by species-specific alterations in faecal microbiota. Gut 2012; 61: 997-1006.
    • (2012) Gut , vol.61 , pp. 997-1006
    • Jeffery, I.B.1    O'Toole, P.W.2    Ohman, L.3
  • 31
    • 84879744885 scopus 로고    scopus 로고
    • The long-term stability of the human gut microbiota
    • Faith JJ, Guruge JL, Charbonneau M, et al,. The long-term stability of the human gut microbiota. Science 2013; 341: 1237439.
    • (2013) Science , vol.341 , pp. 1237439
    • Faith, J.J.1    Guruge, J.L.2    Charbonneau, M.3
  • 32
    • 84885971335 scopus 로고    scopus 로고
    • Ultradeep 16S rRNA sequencing analysis of geographically similar but diverse unexplored marine samples reveal varied bacterial community composition
    • Aravindraja C, Viszwapriya D, Karutha PS,. Ultradeep 16S rRNA sequencing analysis of geographically similar but diverse unexplored marine samples reveal varied bacterial community composition. PLoS ONE 2013; 8: e76724.
    • (2013) PLoS ONE , vol.8 , pp. e76724
    • Aravindraja, C.1    Viszwapriya, D.2    Karutha, P.S.3
  • 33
    • 84905716488 scopus 로고    scopus 로고
    • A role for the gut microbiota in IBS
    • Collins SM,. A role for the gut microbiota in IBS. Nat Rev Gastroenterol Hepatol 2014; 11: 497-505.
    • (2014) Nat Rev Gastroenterol Hepatol , vol.11 , pp. 497-505
    • Collins, S.M.1
  • 35
    • 84899074874 scopus 로고    scopus 로고
    • Review article: Evidence for the role of gut microbiota in irritable bowel syndrome and its potential influence on therapeutic targets
    • Dupont HL,. Review article: evidence for the role of gut microbiota in irritable bowel syndrome and its potential influence on therapeutic targets. Aliment Pharmacol Ther 2014; 39: 1033-42.
    • (2014) Aliment Pharmacol Ther , vol.39 , pp. 1033-1042
    • Dupont, H.L.1
  • 36
    • 84904048875 scopus 로고    scopus 로고
    • A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis
    • Machiels K, Joossens M, Sabino J, et al,. A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis. Gut 2014; 63: 1275-83.
    • (2014) Gut , vol.63 , pp. 1275-1283
    • Machiels, K.1    Joossens, M.2    Sabino, J.3
  • 37
    • 84881295719 scopus 로고    scopus 로고
    • Melancholic microbes: A link between gut microbiota and depression?
    • Dinan TG, Cryan JF,. Melancholic microbes: a link between gut microbiota and depression? Neurogastroenterol Motil 2013; 25: 713-9.
    • (2013) Neurogastroenterol Motil , vol.25 , pp. 713-719
    • Dinan, T.G.1    Cryan, J.F.2
  • 38
    • 77956057409 scopus 로고    scopus 로고
    • Pyrosequencing study of fecal microflora of autistic and control children
    • Finegold SM, Dowd SE, Gontcharova V, et al,. Pyrosequencing study of fecal microflora of autistic and control children. Anaerobe 2010; 16: 444-53.
    • (2010) Anaerobe , vol.16 , pp. 444-453
    • Finegold, S.M.1    Dowd, S.E.2    Gontcharova, V.3
  • 39
    • 84898906169 scopus 로고    scopus 로고
    • Systematic review: Faecal microbiota transplantation therapy for digestive and nondigestive disorders in adults and children
    • Sha S, Liang J, Chen M, et al,. Systematic review: faecal microbiota transplantation therapy for digestive and nondigestive disorders in adults and children. Aliment Pharmacol Ther 2014; 39: 1003-32.
    • (2014) Aliment Pharmacol Ther , vol.39 , pp. 1003-1032
    • Sha, S.1    Liang, J.2    Chen, M.3
  • 40
    • 84872132821 scopus 로고    scopus 로고
    • Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: Evaluation of effective study designs
    • Mizrahi-Man O, Davenport ER, Gilad Y,. Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs. PLoS ONE 2013; 8: e53608.
    • (2013) PLoS ONE , vol.8 , pp. e53608
    • Mizrahi-Man, O.1    Davenport, E.R.2    Gilad, Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.