-
1
-
-
84901358163
-
The placenta harbors a unique microbiome
-
Aagaard K, Ma J, Antony KM, Ganu R, Petrosino J, Versa- lovic J. 2014. The placenta harbors a unique microbiome. Sci Transl Med 6: 237 ra65
-
(2014)
Sci Transl Med
, vol.6
, Issue.237
-
-
Aagaard, K.1
Ma, J.2
Antony, K.M.3
Ganu, R.4
Petrosino, J.5
Versa-Lovic, J.6
-
2
-
-
84868568180
-
Differences in microbial signatures between rectal mucosal biopsies and rectal swabs
-
Araújo-Pérez F, McCoy AN, Okechukwu C, Carroll IM, Smith KM, Jeremiah K, Sandler RS, Asher GN, Keku TO. 2012. Differences in microbial signatures between rectal mucosal biopsies and rectal swabs. Gut Microbes 3: 530-535
-
(2012)
Gut Microbes
, vol.3
, pp. 530-535
-
-
Araújo-Pérez, F.1
McCoy, A.N.2
Okechukwu, C.3
Carroll, I.M.4
Smith, K.M.5
Jeremiah, K.6
Sandler, R.S.7
Asher, G.N.8
Keku, T.O.9
-
3
-
-
77954834323
-
Bacterial diversity in the oral cavity of 10 healthy individuals
-
Bik EM, Long CD, Armitage GC, Loomer P, Emerson J, Mongodin EF, Nelson KE, Gill SR, Fraser-Liggett CM, Relman DA. 2010. Bacterial diversity in the oral cavity of 10 healthy individuals. ISME J 4: 962-974
-
(2010)
ISME J
, vol.4
, pp. 962-974
-
-
Bik, E.M.1
Long, C.D.2
Armitage, G.C.3
Loomer, P.4
Emerson, J.5
Mongodin, E.F.6
Nelson, K.E.7
Gill, S.R.8
Fraser-Liggett, C.M.9
Relman, D.A.10
-
4
-
-
84867563577
-
Microbiome diversity in the bronchial tracts of patients with chronic obstructive pul- monary disease
-
Cabrera-Rubio R, Garcia-Núñez M, Setó L, Antó JM, Moya A, Monsó E, Mira A. 2012. Microbiome diversity in the bronchial tracts of patients with chronic obstructive pul- monary disease. J Clin Microbiol 50: 3562-3568
-
(2012)
J Clin Microbiol
, vol.50
, pp. 3562-3568
-
-
Cabrera-Rubio, R.1
Garcia-Núñez, M.2
Setó, L.3
Antó, J.M.4
Moya, A.5
Monsó, E.6
Mira, A.7
-
5
-
-
84893770837
-
Intracellular bacteria in placen-tal basal plate localize to extravillous trophoblasts
-
Cao B, Mysorekar IU. 2014. Intracellular bacteria in placen-tal basal plate localize to extravillous trophoblasts. Pla- centa 35: 139-142
-
(2014)
Pla- Centa
, vol.35
, pp. 139-142
-
-
Cao, B.1
Mysorekar, I.U.2
-
6
-
-
77952243141
-
QIIME allows analysis of high- throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bush- man FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, et al. 2010. QIIME allows analysis of high- throughput community sequencing data. Nat Methods 7: 335-336
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bush-Man, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
7
-
-
84866429095
-
Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant
-
Charlson ES, Diamond JM, Bittinger K, Fitzgerald AS, Yadav A, Haas AR, Bushman FD, Collman RG. 2012. Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant. Am J Respir Crit Care Med 186: 536-545
-
(2012)
Am J Respir Crit Care Med
, vol.186
, pp. 536-545
-
-
Charlson, E.S.1
Diamond, J.M.2
Bittinger, K.3
Fitzgerald, A.S.4
Yadav, A.5
Haas, A.R.6
Bushman, F.D.7
Collman, R.G.8
-
8
-
-
80052365606
-
Pathobionts of the gastrointestinal microbiota and inflammatory disease
-
Chow J, Tang H, Mazmanian SK. 2011. Pathobionts of the gastrointestinal microbiota and inflammatory disease. Curr Opin Immunol 23: 473-480
-
(2011)
Curr Opin Immunol
, vol.23
, pp. 473-480
-
-
Chow, J.1
Tang, H.2
Mazmanian, S.K.3
-
9
-
-
0037251969
-
The Ribosomal Database Project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole JR, Chai B, Marsh TL, Farris RJ, Wang Q, Kulam SA, Chandra S, McGarrell DM, Schmidt TM, Garrity GM, et al. 2003. The Ribosomal Database Project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31: 442-443
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 442-443
-
-
Cole, J.R.1
Chai, B.2
Marsh, T.L.3
Farris, R.J.4
Wang, Q.5
Kulam, S.A.6
Chandra, S.7
McGarrell, D.M.8
Schmidt, T.M.9
Garrity, G.M.10
-
10
-
-
84888884169
-
High throughput sequencing methods and analysis for micro-biome research
-
Di Bella JM, Bao Y, Gloor GB, Burton JP, Reid G. 2013. High throughput sequencing methods and analysis for micro-biome research. J Microbiol Methods 95: 401-414
-
(2013)
J Microbiol Methods
, vol.95
, pp. 401-414
-
-
Di Bella, J.M.1
Bao, Y.2
Gloor, G.B.3
Burton, J.P.4
Reid, G.5
-
11
-
-
84863227435
-
A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples
-
Dollive S, Peterfreund GL, Sherrill-Mix S, Bittinger K, Sinha R, Hoffmann C, Nabel CS, Hill DA, Artis D, Bachman MA, et al. 2012. A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples. Genome Biol 13: R60
-
(2012)
Genome Biol
, vol.13
, pp. 60
-
-
Dollive, S.1
Peterfreund, G.L.2
Sherrill-Mix, S.3
Bittinger, K.4
Sinha, R.5
Hoffmann, C.6
Nabel, C.S.7
Hill, D.A.8
Artis, D.9
Bachman, M.A.10
-
12
-
-
84872765293
-
Characterization of the vaginal micro- and mycobiome in asymptomatic reproductive-age Estonian women
-
Drell T, Lillsaar T, Tummeleht L, Simm J, Aaspõllu A, Väin E, Saarma I, Salumets A, Donders GGG, Metsis M. 2013. Characterization of the vaginal micro- and mycobiome in asymptomatic reproductive-age Estonian women. PLoS ONE 8: e54379
-
(2013)
Plos ONE
, vol.8
-
-
Drell, T.1
Lillsaar, T.2
Tummeleht, L.3
Simm, J.4
Aaspõllu, A.5
Väin, E.6
Saarma, I.7
Salumets, A.8
Donders, G.9
Metsis, M.10
-
13
-
-
84897545954
-
Redefining the human oral mycobiome with improved practices in amplicon-based taxonomy: Dis- covery of Malassezia as a prominent commensal
-
Dupuy AK, David MS, Li L, Heider TN, Peterson JD, Mon- tano EA, Dongari-Bagtzoglou A, Diaz PI, Strausbaugh LD. 2014. Redefining the human oral mycobiome with improved practices in amplicon-based taxonomy: Dis- covery of Malassezia as a prominent commensal. PLoS ONE 9: e90899
-
(2014)
Plos ONE
, vol.9
-
-
Dupuy, A.K.1
David, M.S.2
Li, L.3
Heider, T.N.4
Peterson, J.D.5
Mon-Tano, E.A.6
Dongari-Bagtzoglou, A.7
Diaz, P.I.8
Strausbaugh, L.D.9
-
14
-
-
78049427245
-
Interaction between pathogenic bacteria and intra- uterine leukocytes triggers alternative molecular signal- ing cascades leading to labor in women
-
Estrada-Gutierrez G, Gomez-Lopez N, Zaga-Clavellina V, Giono-Cerezo S, Espejel-Nuñez A, Gonzalez-Jimenez MA, Espino Y, Sosa S, Olson DM, Vadillo-Ortega F. 2010. Interaction between pathogenic bacteria and intra- uterine leukocytes triggers alternative molecular signal- ing cascades leading to labor in women. Infect Immun 78: 4792-4799
-
(2010)
Infect Immun
, vol.78
, pp. 4792-4799
-
-
Estrada-Gutierrez, G.1
Gomez-Lopez, N.2
Zaga-Clavellina, V.3
Giono-Cerezo, S.4
Espejel-Nuñez, A.5
Gonzalez-Jimenez, M.A.6
Espino, Y.7
Sosa, S.8
Olson, D.M.9
Vadillo-Ortega, F.10
-
15
-
-
84879414990
-
Topographic diversity of fungal and bacterial com- munities in human skin
-
Findley K, Oh J, Yang J, Conlan S, Deming C, Meyer JA, Schoenfeld D, Nomicos E, Park M, Kong HH, et al. 2013. Topographic diversity of fungal and bacterial com- munities in human skin. Nature 498: 367-370
-
(2013)
Nature
, vol.498
, pp. 367-370
-
-
Findley, K.1
Oh, J.2
Yang, J.3
Conlan, S.4
Deming, C.5
Meyer, J.A.6
Schoenfeld, D.7
Nomicos, E.8
Park, M.9
Kong, H.H.10
-
16
-
-
77649230349
-
Characterization of the oral fungal microbiome (Mycobiome) in healthy individ- uals
-
Ghannoum MA, Jurevic RJ, Mukherjee PK, Cui F, Sikaroodi M, Naqvi A, Gillevet PM. 2010. Characterization of the oral fungal microbiome (mycobiome) in healthy individ- uals. PLoS Pathog 6: e1000713
-
(2010)
Plos Pathog
, vol.6
-
-
Ghannoum, M.A.1
Jurevic, R.J.2
Mukherjee, P.K.3
Cui, F.4
Sikaroodi, M.5
Naqvi, A.6
Gillevet, P.M.7
-
17
-
-
79960045904
-
Gene expression profiling: Metatranscriptomics
-
Gilbert JA, Hughes M. 2011. Gene expression profiling: Metatranscriptomics. Methods Mol Biol 733: 195-205
-
(2011)
Methods Mol Biol
, vol.733
, pp. 195-205
-
-
Gilbert, J.A.1
Hughes, M.2
-
18
-
-
84859723328
-
Genetic deletion of dectin-1 does not affect the course of murine experimental co-litis
-
Heinsbroek SE, Oei A, Roelofs JJTH, Dhawan S, te Velde A, Gordon S, de Jonge WJ. 2012. Genetic deletion of dectin-1 does not affect the course of murine experimental co-litis. BMC Gastroenterol 12: 33
-
(2012)
BMC Gastroenterol
, vol.12
, pp. 33
-
-
Heinsbroek, S.E.1
Oei, A.2
Roelofs, J.3
Dhawan, S.4
Te Velde, A.5
Gordon, S.6
De Jonge, W.J.7
-
19
-
-
77649119443
-
Dis-ordered microbial communities in asthmatic airways
-
Hilty M, Burke C, Pedro H, Cardenas P, Bush A, Bossley C, Davies J, Ervine A, Poulter L, Pachter L, et al. 2010. Dis-ordered microbial communities in asthmatic airways. PLoS ONE 5: e8578
-
(2010)
Plos ONE
, vol.5
-
-
Hilty, M.1
Burke, C.2
Pedro, H.3
Cardenas, P.4
Bush, A.5
Bossley, C.6
Davies, J.7
Ervine, A.8
Poulter, L.9
Pachter, L.10
-
20
-
-
84879148662
-
Archaea and fungi of the human gut microbiome: Correlations with diet and bac-terial residents
-
Hoffmann C, Dollive S, Grunberg S, Chen J, Li H, Wu GD, Lewis JD, Bushman FD. 2013. Archaea and fungi of the human gut microbiome: Correlations with diet and bac-terial residents. PLoS ONE 8: e66019
-
(2013)
Plos ONE
, vol.8
-
-
Hoffmann, C.1
Dollive, S.2
Grunberg, S.3
Chen, J.4
Li, H.5
Wu, G.D.6
Lewis, J.D.7
Bushman, F.D.8
-
21
-
-
84936929376
-
Comparison of brush and biopsy sam- pling methods of the ileal pouch for assessment of mu- cosa-associated microbiota of human subjects
-
Huse SM, Young VB, Morrison HG, Antonopoulos DA, Kwon J, Dalal S, Arrieta R, Hubert NA, Shen L, Vineis JH, et al. 2014. Comparison of brush and biopsy sam- pling methods of the ileal pouch for assessment of mu- cosa-associated microbiota of human subjects. Micro- biome 2: 5
-
(2014)
Micro- Biome
, vol.2
, pp. 5
-
-
Huse, S.M.1
Young, V.B.2
Morrison, H.G.3
Antonopoulos, D.A.4
Kwon, J.5
Dalal, S.6
Arrieta, R.7
Hubert, N.A.8
Shen, L.9
Vineis, J.H.10
-
23
-
-
84861964286
-
Interactions between commensal fungi and the C-type lectin receptor Dectin-1 influence colitis
-
Iliev ID, Funari VA, Taylor KD, Nguyen Q, Reyes CN, Strom SP, Brown J, Becker CA, Fleshner PR, Dubinsky M, et al. 2012. Interactions between commensal fungi and the C-type lectin receptor Dectin-1 influence colitis. Science 336: 1314-1317
-
(2012)
Science
, vol.336
, pp. 1314-1317
-
-
Iliev, I.D.1
Funari, V.A.2
Taylor, K.D.3
Nguyen, Q.4
Reyes, C.N.5
Strom, S.P.6
Brown, J.7
Becker, C.A.8
Fleshner, P.R.9
Dubinsky, M.10
-
24
-
-
0035212275
-
Recovery of Candida dubliniensis and other yeasts from human immunodeficiency virus- associated periodontal lesions
-
Jabra-Rizk MA, Ferreira SM, Sabet M, Falkler WA, Merz WG, Meiller TF. 2001. Recovery of Candida dubliniensis and other yeasts from human immunodeficiency virus- associated periodontal lesions. J Clin Microbiol 39: 4520-4522
-
(2001)
J Clin Microbiol
, vol.39
, pp. 4520-4522
-
-
Jabra-Rizk, M.A.1
Ferreira, S.M.2
Sabet, M.3
Falkler, W.A.4
Merz, W.G.5
Meiller, T.F.6
-
25
-
-
33747484543
-
Probiotics for pe- diatric antibiotic-associated diarrhea: A meta-analysis of randomized placebo-controlled trials
-
Johnston BC, Supina AL, Vohra S. 2006. Probiotics for pe- diatric antibiotic-associated diarrhea: A meta-analysis of randomized placebo-controlled trials. CMAJ 175: 377-383
-
(2006)
CMAJ
, vol.175
, pp. 377-383
-
-
Johnston, B.C.1
Supina, A.L.2
Vohra, S.3
-
26
-
-
33746707591
-
Patterns of fungal colonization in preterm infants weighing less than 1000 grams at birth
-
Kaufman DA, Gurka MJ, Hazen KC, Boyle R, Robinson M, Grossman LB. 2006. Patterns of fungal colonization in preterm infants weighing less than 1000 grams at birth. Pediatr Infect Dis J 25: 733-737
-
(2006)
Pediatr Infect Dis J
, vol.25
, pp. 733-737
-
-
Kaufman, D.A.1
Gurka, M.J.2
Hazen, K.C.3
Boyle, R.4
Robinson, M.5
Grossman, L.B.6
-
27
-
-
19344366809
-
UNITE: A database providing web- based methods for the molecular identification of ecto- mycorrhizal fungi
-
Kõljalg U, Larsson K-H, Abarenkov K, Nilsson RH, Alexan- der IJ, Eberhardt U, Erland S, Høiland K, Kjøller R, Lars-son E, et al. 2005. UNITE: A database providing web- based methods for the molecular identification of ecto- mycorrhizal fungi. New Phytol 166: 1063-1068
-
(2005)
New Phytol
, vol.166
, pp. 1063-1068
-
-
Kõljalg, U.1
Larsson, K.-H.2
Abarenkov, K.3
Nilsson, R.H.4
Alexan-Der, I.J.5
Eberhardt, U.6
Erland, S.7
Høiland, K.8
Kjøller, R.9
Lars-Son, E.10
-
28
-
-
82955201588
-
Beyond bacteria: A study of the enteric microbial consortium in extremely low birth weight infants
-
LaTuga MS, Ellis JC, Cotton CM, Goldberg RN, Wynn JL, Jackson RB, Seed PC. 2011. Beyond bacteria: A study of the enteric microbial consortium in extremely low birth weight infants. PLoS ONE 6: e27858
-
(2011)
Plos ONE
, vol.6
-
-
Latuga, M.S.1
Ellis, J.C.2
Cotton, C.M.3
Goldberg, R.N.4
Wynn, J.L.5
Jackson, R.B.6
Seed, P.C.7
-
30
-
-
84872260955
-
Vaginal microbiome: Re- thinking health and disease
-
Ma B, Forney LJ, Ravel J. 2012. Vaginal microbiome: Re- thinking health and disease. Annu Rev Microbiol 66: 371-389
-
(2012)
Annu Rev Microbiol
, vol.66
, pp. 371-389
-
-
Ma, B.1
Forney, L.J.2
Ravel, J.3
-
31
-
-
84866389483
-
PHYMYCO-DB: A curated database for analyses of fungal diversity and evolution
-
Mahé S, Duhamel M, Le Calvez T, Guillot L, Sarbu L, Bre- taudeau A, Collin O, Dufresne A, Kiers ET, Vandenkoorn-huyse P. 2012. PHYMYCO-DB: A curated database for analyses of fungal diversity and evolution. PLoS ONE 7: e43117
-
(2012)
Plos ONE
, vol.7
-
-
Mahé, S.1
Duhamel, M.2
Le Calvez, T.3
Guillot, L.4
Sarbu, L.5
Bre-Taudeau, A.6
Collin, O.7
Dufresne, A.8
Kiers, E.T.9
Vandenkoorn-Huyse, P.10
-
32
-
-
84872347038
-
Does Candida species over- growth protect against Clostridium difficile infection?
-
Manian FA, Bryant A. 2013. Does Candida species over- growth protect against Clostridium difficile infection? Clin Infect Dis 56: 464-465
-
(2013)
Clin Infect Dis
, vol.56
, pp. 464-465
-
-
Manian, F.A.1
Bryant, A.2
-
33
-
-
79951535930
-
Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG
-
Mitra S, Rupek P, Richter DC, Urich T, Gilbert JA, Meyer F, Wilke A, Huson DH. 2011. Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG. BMC Bioinformatics 12: S21
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Mitra, S.1
Rupek, P.2
Richter, D.C.3
Urich, T.4
Gilbert, J.A.5
Meyer, F.6
Wilke, A.7
Huson, D.H.8
-
34
-
-
84862299664
-
The mycobiome: Influencing IBD severity
-
Moyes DL, Naglik JR. 2012. The mycobiome: Influencing IBD severity. Cell Host Microbe 11: 551-552
-
(2012)
Cell Host Microbe
, vol.11
, pp. 551-552
-
-
Moyes, D.L.1
Naglik, J.R.2
-
35
-
-
84897392010
-
Oral mycobiome analysis of HIV- infected patients: Identification of Pichia as an antagonist of opportunistic fungi
-
Mukherjee PK, Chandra J, Retuerto M, Sikaroodi M, Brown RE, Jurevic R, Salata RA, Lederman MM, Gillevet PM, Ghannoum MA. 2014. Oral mycobiome analysis of HIV- infected patients: Identification of Pichia as an antagonist of opportunistic fungi. PLoS Pathog 10: e1003996
-
(2014)
Plos Pathog
, vol.10
-
-
Mukherjee, P.K.1
Chandra, J.2
Retuerto, M.3
Sikaroodi, M.4
Brown, R.E.5
Jurevic, R.6
Salata, R.A.7
Lederman, M.M.8
Gillevet, P.M.9
Ghannoum, M.A.10
-
36
-
-
34547129847
-
Development of the human infant intestinal micro- biota
-
Palmer C, Bik EM, DiGiulio DB, Relman DA, Brown PO. 2007. Development of the human infant intestinal micro- biota. PLoS Biol 5: e177
-
(2007)
Plos Biol
, vol.5
-
-
Palmer, C.1
Bik, E.M.2
Digiulio, D.B.3
Relman, D.A.4
Brown, P.O.5
-
37
-
-
84863288251
-
Characterization of the fungal microbiota (Myco-biome) in healthy and dandruff-afflicted human scalps
-
Park HK, Ha M-H, Park S-G, Kim MN, Kim BJ, Kim W. 2012. Characterization of the fungal microbiota (myco-biome) in healthy and dandruff-afflicted human scalps. PLoS ONE 7: e32847
-
(2012)
Plos ONE
, vol.7
-
-
Park, H.K.1
Ha, M.-H.2
Park, S.-G.3
Kim, M.N.4
Kim, B.J.5
Kim, W.6
-
39
-
-
70349213718
-
Review article: Anti-inflammatory mechanisms of action of Saccharomyces boulardii
-
Pothoulakis C. 2009. Review article: Anti-inflammatory mechanisms of action of Saccharomyces boulardii. Ali- ment Pharmacol Ther 30: 826-833
-
(2009)
Ali- Ment Pharmacol Ther
, vol.30
, pp. 826-833
-
-
Pothoulakis, C.1
-
40
-
-
84867427320
-
The lung microbiome in moderate and severe chronic obstructive pulmonary disease
-
Pragman AA, Kim HB, Reilly CS, Wendt C, Isaacson RE. 2012. The lung microbiome in moderate and severe chronic obstructive pulmonary disease. PLoS ONE 7: e47305
-
(2012)
Plos ONE
, vol.7
-
-
Pragman, A.A.1
Kim, H.B.2
Reilly, C.S.3
Wendt, C.4
Isaacson, R.E.5
-
41
-
-
37549027613
-
SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Glöckner FO. 2007. SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.5
Peplies, J.6
Glöckner, F.O.7
-
42
-
-
0035077712
-
Saccharomyces boulardii stim-ulates intestinal immunoglobulin A immune response to Clostridium difficile toxin A in mice
-
Qamar A, Aboudola S, Warny M, Michetti P, Pothoulakis C, LaMont JT, Kelly CP. 2001. Saccharomyces boulardii stim-ulates intestinal immunoglobulin A immune response to Clostridium difficile toxin A in mice. Infect Immun 69: 2762-2765
-
(2001)
Infect Immun
, vol.69
, pp. 2762-2765
-
-
Qamar, A.1
Aboudola, S.2
Warny, M.3
Michetti, P.4
Pothoulakis, C.5
Lamont, J.T.6
Kelly, C.P.7
-
43
-
-
77950251400
-
A human gut microbial gene catalogue established by meta- genomic sequencing
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, et al. 2010. A human gut microbial gene catalogue established by meta- genomic sequencing. Nature 464: 59-65
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
Nielsen, T.7
Pons, N.8
Levenez, F.9
Yamada, T.10
-
44
-
-
79952750340
-
Vaginal microbiome of reproductive- age women
-
Ravel J, Gajer P, Abdo Z, Schneider GM, Koenig SSK, McCulle SL, Karlebach S, Gorle R, Russell J, Tacket CO, et al. 2011. Vaginal microbiome of reproductive- age women. Proc Natl Acad Sci 108: 4680-4687
-
(2011)
Proc Natl Acad Sci
, vol.108
, pp. 4680-4687
-
-
Ravel, J.1
Gajer, P.2
Abdo, Z.3
Schneider, G.M.4
Koenig, S.5
McCulle, S.L.6
Karlebach, S.7
Gorle, R.8
Russell, J.9
Tacket, C.O.10
-
45
-
-
0033848975
-
Fungal colonization of haematological patients receiving cyto- toxic chemotherapy: Emergence of azole-resistant Sac- charomyces cerevisiae
-
Salonen JH, Richardson MD, Gallacher K, Issakainen J, He-lenius H, Lehtonen OP, Nikoskelainen J. 2000. Fungal colonization of haematological patients receiving cyto- toxic chemotherapy: Emergence of azole-resistant Sac- charomyces cerevisiae. J Hosp Infect 45: 293-301
-
(2000)
J Hosp Infect
, vol.45
, pp. 293-301
-
-
Salonen, J.H.1
Richardson, M.D.2
Gallacher, K.3
Issakainen, J.4
He-Lenius, H.5
Lehtonen, O.P.6
Nikoskelainen, J.7
-
46
-
-
84869045574
-
Reference databases for taxonomic assignment in metagenomics
-
Santamaria M, Fosso B, Consiglio A, De Caro G, Grillo G, Licciulli F, Liuni S, Marzano M, Alonso-Alemany D, Va- liente G, et al. 2012. Reference databases for taxonomic assignment in metagenomics. Brief Bioinform 13: 682-695
-
(2012)
Brief Bioinform
, vol.13
, pp. 682-695
-
-
Santamaria, M.1
Fosso, B.2
Consiglio, A.3
De Caro, G.4
Grillo, G.5
Licciulli, F.6
Liuni, S.7
Marzano, M.8
Alonso-Alemany, D.9
Va-Liente, G.10
-
47
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Rob-inson CJ, et al. 2009. Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Env Microbiol 75: 7537-7541
-
(2009)
Appl Env Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Rob-Inson, C.J.10
-
48
-
-
0032733628
-
Oral flora and pathogenic organisms
-
Schuster GS. 1999. Oral flora and pathogenic organisms. Infect Dis Clin North Am 13: 757-774
-
(1999)
Infect Dis Clin North Am
, vol.13
, pp. 757-774
-
-
Schuster, G.S.1
-
49
-
-
84930453612
-
A novel role of Dectin-1 signaling in promoting intestinal inflamma-tion
-
Tang C, Kamiya T, Kadoki M, Iwakura Y. 2012. A novel role of Dectin-1 signaling in promoting intestinal inflamma-tion. Cytokine 59: 516
-
(2012)
Cytokine
, vol.59
, pp. 516
-
-
Tang, C.1
Kamiya, T.2
Kadoki, M.3
Iwakura, Y.4
-
50
-
-
73349142966
-
Prevention of Clos- tridium difficile infectionwith Saccharomyces boulardii: A systematic review
-
Tung JM, Dolovich LR, Lee CH. 2009. Prevention of Clos- tridium difficile infectionwith Saccharomyces boulardii: A systematic review. Can J Gastroenterol 23: 817-821
-
(2009)
Can J Gastroenterol
, vol.23
, pp. 817-821
-
-
Tung, J.M.1
Dolovich, L.R.2
Lee, C.H.3
-
51
-
-
84873708523
-
The oral microbiome in health and disease
-
Wade WG. 2013. The oral microbiome in health and disease. Pharmacol Res 69: 137-143
-
(2013)
Pharmacol Res
, vol.69
, pp. 137-143
-
-
Wade, W.G.1
-
52
-
-
84855713981
-
Spectrum of mycoses
-
4th ed. (ed. Baron S). University of Texas, Galveston, TX
-
Walsh TJ, Dixon D. 1996. Spectrum of mycoses. In Medical microbiology, 4th ed. (ed. Baron S). University of Texas, Galveston, TX
-
(1996)
Medical Microbiology
-
-
Walsh, T.J.1
Dixon, D.2
-
53
-
-
84897542122
-
CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characteriza- tion of fungal microbiota
-
White JR, Maddox C, White O, Angiuoli SV, Fricke WF. 2013. CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characteriza- tion of fungal microbiota. Microbiome 1: 6
-
(2013)
Microbiome
, vol.1
, pp. 6
-
-
White, J.R.1
Maddox, C.2
White, O.3
Angiuoli, S.V.4
Fricke, W.F.5
-
54
-
-
0033950176
-
Isolation and identification of Candida from the oral cavity
-
Williams DW, Lewis MA. 2000. Isolation and identification of Candida from the oral cavity. Oral Dis 6: 3-11
-
(2000)
Oral Dis
, vol.6
, pp. 3-11
-
-
Williams, D.W.1
Lewis, M.A.2
-
55
-
-
74949134895
-
Defining the healthy “core microbiome” of oral microbial commu- nities
-
Zaura E, Keijser BJF, Huse SM, Crielaard W. 2009. Defining the healthy “core microbiome” of oral microbial commu- nities. BMC Microbiol 9: 259
-
(2009)
BMC Microbiol
, vol.9
, pp. 259
-
-
Zaura, E.1
Keijser, B.2
Huse, S.M.3
Crielaard, W.4
|