-
2
-
-
33947581390
-
The impact of translocations and gene fusions on cancer causation
-
Mitelman F, Johansson B, Mertens F. The impact of translocations and gene fusions on cancer causation. Nat Rev Cancer 2007; 7: 233-245
-
(2007)
Nat Rev Cancer
, vol.7
, pp. 233-245
-
-
Mitelman, F.1
Johansson, B.2
Mertens, F.3
-
3
-
-
84864255882
-
The origin and evolution of mutations in acute myeloid leukemia
-
Welch JS, Ley TJ, Link DC, et al. The origin and evolution of mutations in acute myeloid leukemia. Cell 2012; 150: 264-278
-
(2012)
Cell
, vol.150
, pp. 264-278
-
-
Welch, J.S.1
Ley, T.J.2
Link, D.C.3
-
4
-
-
84887619842
-
Exomic analysis of myxoid liposarcomas, synovial sarcomas and osteosarcomas
-
Joseph CG, Hwang H, Jiao Y, et al. Exomic analysis of myxoid liposarcomas, synovial sarcomas and osteosarcomas. Genes Chromosomes Cancer 2014; 53: 15-24
-
(2014)
Genes Chromosomes Cancer
, vol.53
, pp. 15-24
-
-
Joseph, C.G.1
Hwang, H.2
Jiao, Y.3
-
5
-
-
34548446433
-
Sarcomas: Genetics, signalling, and cellular origins Part 1: The fellowship of TET
-
Riggi N, Cironi L, Suvà ML, et al. Sarcomas: genetics, signalling, and cellular origins. Part 1: the fellowship of TET. J Pathol 2007; 213: 4-20
-
(2007)
J Pathol
, vol.213
, pp. 4-20
-
-
Riggi, N.1
Cironi, L.2
Suvà, M.L.3
-
6
-
-
84873595647
-
Modeling clear cell sarcomagenesis in the mouse: Cell of origin differentiation state impacts tumor characteristics
-
Straessler KM, Jones KB, Hu H, et al. Modeling clear cell sarcomagenesis in the mouse: cell of origin differentiation state impacts tumor characteristics. Cancer Cell 2013; 23: 215-227
-
(2013)
Cancer Cell
, vol.23
, pp. 215-227
-
-
Straessler, K.M.1
Jones, K.B.2
Hu, H.3
-
7
-
-
84889635690
-
Evolving techniques for gene fusion detection in soft tissue tumours
-
Mertens F, Tayebwa J. Evolving techniques for gene fusion detection in soft tissue tumours. Histopathology 2013; 64: 151-162
-
(2013)
Histopathology
, vol.64
, pp. 151-162
-
-
Mertens, F.1
Tayebwa, J.2
-
8
-
-
78751570979
-
RNA sequencing: Advances, challenges and opportunities
-
Ozsolak F, Milos PM. RNA sequencing: advances, challenges and opportunities. Nat Rev Genet 2011; 12: 87-98
-
(2011)
Nat Rev Genet
, vol.12
, pp. 87-98
-
-
Ozsolak, F.1
Milos, P.M.2
-
9
-
-
84876996918
-
TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim D, Pertea G, Trapnell C, et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 2013; 14: R36
-
(2013)
Genome Biol
, vol.14
, pp. R36
-
-
Kim, D.1
Pertea, G.2
Trapnell, C.3
-
10
-
-
84873606413
-
SOAPfuse: An algorithm for identifying fusion transcripts from paired-end RNA-Seq data
-
Jia W, Qiu K, He M, et al. SOAPfuse: an algorithm for identifying fusion transcripts from paired-end RNA-Seq data. Genome Biol 2013; 14: R12
-
(2013)
Genome Biol
, vol.14
, pp. R12
-
-
Jia, W.1
Qiu, K.2
He, M.3
-
11
-
-
80054003528
-
ChimeraScan: A tool for identifying chimeric transcription in sequencing data
-
Iyer MK, Chinnaiyan AM, Maher CA. ChimeraScan: a tool for identifying chimeric transcription in sequencing data. Bioinformatics 2011; 27: 2903-2904
-
(2011)
Bioinformatics
, vol.27
, pp. 2903-2904
-
-
Iyer, M.K.1
Chinnaiyan, A.M.2
Maher, C.A.3
-
12
-
-
0027971444
-
A new cytogenetic subgroup in lipomas: Loss of chromosome 16 material in spindle and pleomorphic lipomas
-
Mandahl N, Mertens F, Willén H, et al. A new cytogenetic subgroup in lipomas: loss of chromosome 16 material in spindle and pleomorphic lipomas. J Cancer Res Oncol 1994; 120: 707-711
-
(1994)
J Cancer Res Oncol
, vol.120
, pp. 707-711
-
-
Mandahl, N.1
Mertens, F.2
Willén, H.3
-
14
-
-
84895928246
-
A novel SERPINE1-FOSB fusion gene results in transcriptional up-regulation of FOSB in pseudomyogenic haemangioendothelioma
-
Walther C, Tayebwa J, Lilljebjorn H, et al. A novel SERPINE1-FOSB fusion gene results in transcriptional up-regulation of FOSB in pseudomyogenic haemangioendothelioma. J Pathol 2014; 232: 534-540
-
(2014)
J Pathol
, vol.232
, pp. 534-540
-
-
Walther, C.1
Tayebwa, J.2
Lilljebjorn, H.3
-
16
-
-
2342576390
-
The chimeric FUS/CREB3L2 gene is specific for low-grade fibromyxoid sarcoma
-
Panagopoulos I, Storlazzi CT, Fletcher CD, et al. The chimeric FUS/CREB3L2 gene is specific for low-grade fibromyxoid sarcoma. Genes Chromosomes Cancer 2004; 40: 218-228
-
(2004)
Genes Chromosomes Cancer
, vol.40
, pp. 218-228
-
-
Panagopoulos, I.1
Storlazzi, C.T.2
Fletcher, C.D.3
-
17
-
-
84883055136
-
Comprehensive genetic analysis identifies a pathognomonic NAB2/STAT6 fusion gene non-random secondary genomic imbalances, and a characteristic gene expression profile in solitary fibrous tumor
-
Mohajeri A, Tayebwa J, Collin A, et al. Comprehensive genetic analysis identifies a pathognomonic NAB2/STAT6 fusion gene, non-random secondary genomic imbalances, and a characteristic gene expression profile in solitary fibrous tumor. Genes Chromosomes Cancer 2013; 52: 873-886
-
(2013)
Genes Chromosomes Cancer
, vol.52
, pp. 873-886
-
-
Mohajeri, A.1
Tayebwa, J.2
Collin, A.3
-
18
-
-
80051507403
-
TopHat-Fusion: An algorithm for discovery of novel fusion transcripts
-
Kim D, Salzberg SL. TopHat-Fusion: an algorithm for discovery of novel fusion transcripts. Genome Biol; 12: R72
-
Genome Biol
, vol.12
, pp. R72
-
-
Kim, D.1
Salzberg, S.L.2
-
19
-
-
78751650428
-
Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples
-
Nacu S, Yuan W, Kan Z, et al. Deep RNA sequencing analysis of readthrough gene fusions in human prostate adenocarcinoma and reference samples. BMC Med Genomics 2011; 4: 11
-
(2011)
BMC Med Genomics
, vol.4
, pp. 11
-
-
Nacu, S.1
Yuan, W.2
Kan, Z.3
-
20
-
-
84889000676
-
Application of next generation sequencing to human gene fusion detection: Computational tools, features and perspectives
-
Wang Q, Xia J, Jia P, et al. Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives. Brief Bioinform 2012; 14: 506-519
-
(2012)
Brief Bioinform
, vol.14
, pp. 506-519
-
-
Wang, Q.1
Xia, J.2
Jia, P.3
-
21
-
-
84874867981
-
State-of-The-Art fusion-finder algorithms sensitivity and specificity
-
Carrara M, Beccuit M, Lazzarato F, et al. State-of-The-Art fusion-finder algorithms sensitivity and specificity. Biomed Res Int 2013; 2013: 340620
-
(2013)
Biomed Res Int
, vol.2013
, pp. 340620
-
-
Carrara, M.1
Beccuit, M.2
Lazzarato, F.3
-
22
-
-
84903288770
-
The 'grep' command but not fusionmap fusionfinder or chimerascan captures the cic-dux4 fusion gene from whole transcriptome sequencing data on a small round cell tumor with t(4; 19)(q35; q13
-
Panagopoulos I, Gorunova L, Bjerkehagen B, et al. The 'Grep' command but not FusionMap, FusionFinder or ChimeraScan captures the CIC-DUX4 fusion gene from whole transcriptome sequencing data on a small round cell tumor with t(4; 19)(q35; q13). PLoS One 2014; 9: e99439
-
(2014)
PLoS One
, vol.9
, pp. e99439
-
-
Panagopoulos, I.1
Gorunova, L.2
Bjerkehagen, B.3
-
23
-
-
84898466517
-
RNA-seq identifies clinically relevant fusion genes in leukemia including a novel MEF2D/CSF1R fusion responsive to imatinib
-
Lilljebjorn H, Agerstam H, Orsmark-Pietras C, et al. RNA-seq identifies clinically relevant fusion genes in leukemia including a novel MEF2D/CSF1R fusion responsive to imatinib. Leukemia 2014; 28: 977-979
-
(2014)
Leukemia
, vol.28
, pp. 977-979
-
-
Lilljebjorn, H.1
Agerstam, H.2
Orsmark-Pietras, C.3
-
26
-
-
84892960740
-
Integrative genome and transcriptome analyses reveal two distinct types of ring chromosome in soft tissue sarcomas
-
Nord KH, Macchia G, Tayebwa J, et al. Integrative genome and transcriptome analyses reveal two distinct types of ring chromosome in soft tissue sarcomas. Hum Mol Genet 2014; 23: 878-888
-
(2014)
Hum Mol Genet
, vol.23
, pp. 878-888
-
-
Nord, K.H.1
MacChia, G.2
Tayebwa, J.3
-
27
-
-
44349103099
-
A polycomb group protein, PHF1, is involved in the response to DNA double-strand breaks in human cell
-
Hong Z, Jiang J, Lan L, et al. A polycomb group protein, PHF1, is involved in the response to DNA double-strand breaks in human cell. Nucleic Acids Res 2008; 36: 2939-2947
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 2939-2947
-
-
Hong, Z.1
Jiang, J.2
Lan, L.3
-
28
-
-
84865268959
-
Recurrent rearrangement of the PHF1 gene in ossifying fibromyxoid tumors
-
Gebre-Medhin S, Nord KH, Möller E, et al. Recurrent rearrangement of the PHF1 gene in ossifying fibromyxoid tumors. Am J Pathol 2012; 181: 1069-1077
-
(2012)
Am J Pathol
, vol.181
, pp. 1069-1077
-
-
Gebre-Medhin, S.1
Nord, K.H.2
Möller, E.3
-
29
-
-
84890127103
-
Novel zc3h7b-bcor meaf6-phf1, and epc1-phf1 fusions in ossifying fibromyxoid tumors-molecular characterization shows genetic overlap with endometrial stromal sarcoma
-
Antonescu CR, Sung YS, Chen CL, et al. Novel ZC3H7B-BCOR, MEAF6-PHF1, and EPC1-PHF1 fusions in ossifying fibromyxoid tumors-molecular characterization shows genetic overlap with endometrial stromal sarcoma. Genes Chromosomes Cancer 2014; 53: 183-193
-
(2014)
Genes Chromosomes Cancer
, vol.53
, pp. 183-193
-
-
Antonescu, C.R.1
Sung, Y.S.2
Chen, C.L.3
-
30
-
-
50849112779
-
Ring chromosomes in human neoplasias
-
Gebhart E. Ring chromosomes in human neoplasias. Cytogenet Genome Res 2008; 121: 149-173
-
(2008)
Cytogenet Genome Res
, vol.121
, pp. 149-173
-
-
Gebhart, E.1
-
31
-
-
0345711466
-
The structure and dynamics of ring chromosomes in human neoplastic and non-neoplastic cells
-
Gisselsson D, Hoglund M, Mertens F, et al. The structure and dynamics of ring chromosomes in human neoplastic and non-neoplastic cells. Hum Genet 1999; 104: 315-325
-
(1999)
Hum Genet
, vol.104
, pp. 315-325
-
-
Gisselsson, D.1
Hoglund, M.2
Mertens, F.3
-
32
-
-
84902680254
-
Low-grade fibromyxoid sarcoma
-
Fletcher CDM, Bridge JA, Hogendoorn PCW, Mertens F eds. 4th (ed.) IARC Press: Lyon
-
Folpe AL, Hornick JL, Mertens F. Low-grade fibromyxoid sarcoma. In: Fletcher CDM, Bridge JA, Hogendoorn PCW, Mertens F eds. WHO Classification of Tumours of Soft Tissue and Bone. 4th (ed.) IARC Press: Lyon, 2013, p 95-96
-
(2013)
WHO Classification of Tumours of Soft Tissue and Bone
, pp. 95-96
-
-
Folpe, A.L.1
Hornick, J.L.2
Mertens, F.3
-
33
-
-
84884703736
-
Novel MIR143-NOTCH fusions in benign and malignant glomus tumors
-
Mosquera JM, Sboner A, Zhang L, et al. Novel MIR143-NOTCH fusions in benign and malignant glomus tumors. Genes Chromosomes Cancer 2013; 52: 1075-1087
-
(2013)
Genes Chromosomes Cancer
, vol.52
, pp. 1075-1087
-
-
Mosquera, J.M.1
Sboner, A.2
Zhang, L.3
|