The "grep" command but not FusionMap, FusionFinder or ChimeraScan captures the CIC-DUX4 fusion gene from whole transcriptome sequencing data on a small round cell tumor with t(4;19)(q35;q13)

PLoS ONE

Volumn 9, Issue 6, 2014, Pages

  Panagopoulos, Ioannis ^a,b   Gorunova, Ludmila ^a,b   Bjerkehagen, Bodil ^a   Heim, Sverre ^a,b  

^a OSLO UNIVERSITY HOSPITAL   (Norway)

^b UNIVERSITY OF OSLO   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; CASE REPORT; CHROMOSOME TRANSLOCATION 19; CIC DUX4 GENE; CNFN GENE; DNA SEQUENCE; DNA TEMPLATE; ERF GENE; EXON; FEMALE; FUSION GENE; GENE AMPLIFICATION; GENE EXPRESSION; GENE IDENTIFICATION; GENE LOCATION; GSK3A GENE; HUMAN; KARYOTYPE 46,XX; LIPE GENE; MEGF8 GENE; NUCLEOTIDE SEQUENCE; PAFAH1B3 GENE; PRR19 GENE; RNA SEQUENCE; SMALL CELL SARCOMA; TMEM145 GENE; BIOSYNTHESIS; FLUORESCENCE IN SITU HYBRIDIZATION; GENE TRANSLOCATION; GENETICS; KARYOTYPE; PATHOLOGY; SEQUENCE ANALYSIS; SOFT TISSUE TUMOR;

CIC-DUX4 FUSION PROTEIN, HUMAN; ONCOPROTEIN; TRANSCRIPTOME;

ADULT; FEMALE; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; KARYOTYPE; ONCOGENE PROTEINS, FUSION; SEQUENCE ANALYSIS, RNA; SOFT TISSUE NEOPLASMS; TRANSCRIPTOME; TRANSLOCATION, GENETIC;

EID: 84903288770     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0099439     Document Type: Article

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