-
1
-
-
0040460179
-
List of bacterial names with standing in nomenclature: A folder available on the internet
-
Euzéby JP (1997) List of bacterial names with standing in nomenclature: a folder available on the internet. Int J Syst Bacteriol 47(2):590-592
-
(1997)
Int J Syst Bacteriol
, vol.47
, Issue.2
, pp. 590-592
-
-
Euzéby, J.P.1
-
3
-
-
83155173573
-
16-the use of rRNA gene sequence data in the classification and identification of prokaryotes
-
Fred R, Aharon O (eds) Academic, Amsterdam
-
Ludwig W, Glöckner FO, Yilmaz P (2011) 16-the use of rRNA gene sequence data in the classification and identification of prokaryotes. In: Fred R, Aharon O (eds) Taxonomy of prokaryotes. Academic, Amsterdam, pp 349-384
-
(2011)
Taxonomy of Prokaryotes
, pp. 349-384
-
-
Ludwig, W.1
Glöckner, F.O.2
Yilmaz, P.3
-
4
-
-
0027998116
-
Bacterial phylogeny based on 16S and 23S rRNA sequence analysis
-
Ludwig W, Schleifer KH (1994) Bacterial phylogeny based on 16S and 23S rRNA sequence analysis. FEMS Microbiol Rev 15:155-173
-
(1994)
FEMS Microbiol Rev
, vol.15
, pp. 155-173
-
-
Ludwig, W.1
Schleifer, K.H.2
-
5
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar, Buchner A, Lai T, Steppi S, Jobb G, Förster W, Brettske I, Gerber S, Ginhart AW, Gross O, Grumann S, Hermann S, Jost R, König A, Liss T, Lüssmann R, May M, Nonhoff B, Reichel B, Strehlow R, Stamatakis A, Stuckmann N, Vilbig A, Lenke M, Ludwig T, Bode A, Schleifer K-H (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32(4):1363-1371
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.4
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar Buchner, A.6
Lai, T.7
Steppi, S.8
Jobb, G.9
Förster, W.10
Brettske, I.11
Gerber, S.12
Ginhart, A.W.13
Gross, O.14
Grumann, S.15
Hermann, S.16
Jost, R.17
König, A.18
Liss, T.19
Lüssmann, R.20
May, M.21
Nonhoff, B.22
Reichel, B.23
Strehlow, R.24
Stamatakis, A.25
Stuckmann, N.26
Vilbig, A.27
Lenke, M.28
Ludwig, T.29
Bode, A.30
Schleifer, K.-H.31
more..
-
6
-
-
84891817929
-
LPSN-list of prokaryotic names with standing in nomenclature
-
Parte AC (2014) LPSN-list of prokaryotic names with standing in nomenclature. Nucleic Acids Res 42(1):D613-D616
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.1
, pp. D613-D616
-
-
Parte, A.C.1
-
7
-
-
84864134721
-
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
-
Pruesse E, Peplies J, Glöckner FO (2012) SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics 28(14):1823-1829
-
(2012)
Bioinformatics
, vol.28
, Issue.14
, pp. 1823-1829
-
-
Pruesse, E.1
Peplies, J.2
Glöckner, F.O.3
-
8
-
-
84873739311
-
The SILVA ribosomal RNA gene database project: Improved data processing and web-based tools
-
Database issue
-
Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, Peplies J, Glöckner FO (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res 41(Database issue):D590-D596
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
Peplies, J.7
Glöckner, F.O.8
-
9
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):406-425
-
(1987)
Mol Biol Evol
, vol.4
, Issue.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
10
-
-
0035989633
-
Report of the AdHoc committee for the re-evaluation of the species definition in bacteriology
-
Stackebrandt E, Frederiksen W, Garrity GM, Grimont PAD, Kämpfer P, Maiden MCJ, Nesme X, Rosselló-Mora R, Swings J, Trüper HG, Vauterin L, Ward A, Whitman WB (2002) Report of the AdHoc committee for the re-evaluation of the species definition in bacteriology. Int J Sys Evol Microbiol 52:1043-1047
-
(2002)
Int J Sys Evol Microbiol
, vol.52
, pp. 1043-1047
-
-
Stackebrandt, E.1
Frederiksen, W.2
Garrity, G.M.3
Grimont, P.A.D.4
Kämpfer, P.5
Maiden, M.C.J.6
Nesme, X.7
Rosselló-Mora, R.8
Swings, J.9
Trüper, H.G.10
Vauterin, L.11
Ward, A.12
Whitman, W.B.13
-
11
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22(21):2688-2690
-
(2006)
Bioinformatics
, vol.22
, Issue.21
, pp. 2688-2690
-
-
Stamatakis, A.1
-
13
-
-
76849088617
-
Notes on the characterization of prokaryote strains for taxonomic purposes
-
Tindall BJ, Rosselló-Móra R, Busse H-J, Ludwig W, Kämpfer P (2010) Notes on the characterization of prokaryote strains for taxonomic purposes. Int J Syst Evol Microbiol 60:249-266
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 249-266
-
-
Tindall, B.J.1
Rosselló-Móra, R.2
Busse, H.-J.3
Ludwig, W.4
Kämpfer, P.5
-
14
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky L, Moore LH, Moore WC, Murray RGE, Stackebrandt E, Starr MP, Trüper HG (1987) Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463-464
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, L.6
Moore, L.H.7
Moore, W.C.8
Murray, R.G.E.9
Stackebrandt, E.10
Starr, M.P.11
Trüper, H.G.12
-
15
-
-
0023184331
-
Bacterial evolution
-
Woese CR (1987) Bacterial evolution. Microbiol Rev 51:221-271
-
(1987)
Microbiol Rev
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
-
16
-
-
52149085893
-
The all-species living tree project: A regularly updated 16S rRNA-based phylogenetic tree of all sequenced type strains
-
Yarza P, Richter M, Peplies J, Euzéby J, Amann R, Schleifer K-H, Ludwig W, Glöckner FO, Rosselló-Móra R (2008) The all-species living tree project: a regularly updated 16S rRNA-based phylogenetic tree of all sequenced type strains. System Appl Microbiol 31:241-250
-
(2008)
System Appl Microbiol
, vol.31
, pp. 241-250
-
-
Yarza, P.1
Richter, M.2
Peplies, J.3
Euzéby, J.4
Amann, R.5
Schleifer, K.-H.6
Ludwig, W.7
Glöckner, F.O.8
Rosselló-Móra, R.9
-
17
-
-
84874333859
-
Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names
-
Yarza P, Spröer C, Swiderski J, Mrotzek N, Spring S, Tindall BJ, Gronow S, Pukall R, Klenk H-P, Lang E, Verbarg S, Crouch A, Lilburn T, Beck B, Unosson C, Cardew S, Moore ERB, Gomila M, Nakagawa Y, Janssens D, De Vos P, Peiren J, Suttels T, Clermont D, Bizet C, Sakamoto M, Iida T, Kudo T, Kosako Y, Oshida Y, Ohkuma M, Arahal DR, Spieck E, Pommerening Roeser A, Figge M, Park D, Buchanan P, Cifuentes A, Munoz R, Euzéby J, Schleifer K-H, Ludwig W, Amann R, Glöckner FO, Rosselló-Móra R (2013) Sequencing orphan species initiative (SOS): filling the gaps in the 16S rRNA gene sequence database for all species with validly published names. Syst Appl Microbiol 36:69-73
-
(2013)
Syst Appl Microbiol
, vol.36
, pp. 69-73
-
-
Yarza, P.1
Spröer, C.2
Swiderski, J.3
Mrotzek, N.4
Spring, S.5
Tindall, B.J.6
Gronow, S.7
Pukall, R.8
Klenk, H.-P.9
Lang, E.10
Verbarg, S.11
Crouch, A.12
Lilburn, T.13
Beck, B.14
Unosson, C.15
Cardew, S.16
Moore, E.R.B.17
Gomila, M.18
Nakagawa, Y.19
Janssens, D.20
De Vos, P.21
Peiren, J.22
Suttels, T.23
Clermont, D.24
Bizet, C.25
Sakamoto, M.26
Iida, T.27
Kudo, T.28
Kosako, Y.29
Oshida, Y.30
Ohkuma, M.31
Arahal, D.R.32
Spieck, E.33
Pommerening Roeser, A.34
Figge, M.35
Park, D.36
Buchanan, P.37
Cifuentes, A.38
Munoz, R.39
Euzéby, J.40
Schleifer, K.-H.41
Ludwig, W.42
Amann, R.43
Glöckner, F.O.44
Rosselló-Móra, R.45
more..
-
18
-
-
84891813947
-
The SILVA and "all-species Living Tree Project (LTP)" taxonomic frameworks
-
Yilmaz P, Parfrey LW, Yarza P, Gerken J, Pruesse E, Quast C, Schweer T, Peplies J, Ludwig W, Glöckner FO (2014) The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks. Nucleic Acids Res 42(1): D643-D648
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.1
, pp. D643-D648
-
-
Yilmaz, P.1
Parfrey, L.W.2
Yarza, P.3
Gerken, J.4
Pruesse, E.5
Quast, C.6
Schweer, T.7
Peplies, J.8
Ludwig, W.9
Glöckner, F.O.10
|