-
1
-
-
33947221422
-
Environmental shotgun sequencing: Its potential and challenges for studying the hidden world of microbes
-
Eisen, J.A. Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes. PLoS Biol. 5, e82 (2007).
-
(2007)
PLoS Biol.
, vol.5
, pp. e82
-
-
Eisen, J.A.1
-
2
-
-
78149272458
-
Genomic and functional adaptation in surface ocean planktonic prokaryotes
-
Yooseph, S. et al. Genomic and functional adaptation in surface ocean planktonic prokaryotes. Nature 468, 60-66 (2010).
-
(2010)
Nature
, vol.468
, pp. 60-66
-
-
Yooseph, S.1
-
3
-
-
84906544965
-
A microbial ecosystem beneath the West Antarctic ice sheet
-
Christner, B.C. et al. A microbial ecosystem beneath the West Antarctic ice sheet. Nature 512, 310-313 (2014).
-
(2014)
Nature
, vol.512
, pp. 310-313
-
-
Christner, B.C.1
-
4
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin, J. et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464, 59-65 (2010).
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
-
5
-
-
84871826193
-
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
-
Fierer, N. et al. Cross-biome metagenomic analyses of soil microbial communities and their functional attributes. Proc. Natl. Acad. Sci. USA 109, 21390-21395 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 21390-21395
-
-
Fierer, N.1
-
6
-
-
84859911168
-
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
-
Fierer, N. et al. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 6, 1007-1017 (2012).
-
(2012)
ISME J
, vol.6
, pp. 1007-1017
-
-
Fierer, N.1
-
7
-
-
67349191015
-
Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay Bahamas
-
Foster, J.S. et al. Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas. ISME J. 3, 573-587 (2009).
-
(2009)
ISME J
, vol.3
, pp. 573-587
-
-
Foster, J.S.1
-
8
-
-
84893535422
-
Inhalable microorganisms in Beijing?s PM2.5 and PM10 pollutants during a severe smog event
-
Cao, C. et al. Inhalable microorganisms in Beijing?s PM2.5 and PM10 pollutants during a severe smog event. Environ. Sci. Technol. 48, 1499-1507 (2014).
-
(2014)
Environ. Sci. Technol.
, vol.48
, pp. 1499-1507
-
-
Cao, C.1
-
9
-
-
84878013119
-
Temporal variability and effect of environmental variables on airborne bacterial communities in an urban area of Northern Italy
-
Bertolini, V. et al. Temporal variability and effect of environmental variables on airborne bacterial communities in an urban area of Northern Italy. Appl. Microbiol. Biotechnol. 97, 6561-6570 (2013).
-
(2013)
Appl. Microbiol. Biotechnol.
, vol.97
, pp. 6561-6570
-
-
Bertolini, V.1
-
10
-
-
79953023907
-
Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments
-
Bowers, R.M., McLetchie, S., Knight, R. & Fierer, N. Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments. ISME J. 5, 601-612 (2011).
-
(2011)
ISME J.
, vol.5
, pp. 601-612
-
-
Bowers, R.M.1
McLetchie, S.2
Knight, R.3
Fierer, N.4
-
11
-
-
33846035747
-
Urban aerosols harbor diverse and dynamic bacterial populations
-
Brodie, E.L. et al. Urban aerosols harbor diverse and dynamic bacterial populations. Proc. Natl. Acad. Sci. USA 104, 299-304 (2007).
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 299-304
-
-
Brodie, E.L.1
-
12
-
-
84873743151
-
Microbiome of the upper troposphere: Species composition and prevalence, effects of tropical storms, and atmospheric implications
-
Deleon-Rodriguez, N. et al. Microbiome of the upper troposphere: species composition and prevalence, effects of tropical storms, and atmospheric implications. Proc. Natl. Acad. Sci. USA 110, 2575-2580 (2013).
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 2575-2580
-
-
Deleon-Rodriguez, N.1
-
13
-
-
84877153099
-
Culture-independent analysis of aerosol microbiology in a metropolitan subway system
-
Robertson, C.E. et al. Culture-independent analysis of aerosol microbiology in a metropolitan subway system. Appl. Environ. Microbiol. 79, 3485-3493 (2013).
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 3485-3493
-
-
Robertson, C.E.1
-
14
-
-
84887856511
-
Seasonal variability in bacterial and fungal diversity of the near-surface atmosphere
-
Bowers, R.M. et al. Seasonal variability in bacterial and fungal diversity of the near-surface atmosphere. Environ. Sci. Technol. 47, 12097-12106 (2013).
-
(2013)
Environ. Sci. Technol.
, vol.47
, pp. 12097-12106
-
-
Bowers, R.M.1
-
15
-
-
84865576257
-
Comparative metagenomics of toxic freshwater cyanobacteria bloom communities on two continents
-
Steffen, M.M. et al. Comparative metagenomics of toxic freshwater cyanobacteria bloom communities on two continents. PloS ONE 7, e44002 (2012).
-
(2012)
PloS ONE
, vol.7
, pp. e44002
-
-
Steffen, M.M.1
-
16
-
-
84899507119
-
Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics
-
Rinke, C. et al. Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics. Nat. Protoc. 9, 1038-1048 (2014).
-
(2014)
Nat. Protoc.
, vol.9
, pp. 1038-1048
-
-
Rinke, C.1
-
17
-
-
33644698248
-
Control and management of hospital indoor air quality
-
Leung, M. & Chan, A.H. Control and management of hospital indoor air quality. Med. Sci. Monit. 12, SR17-23 (2006).
-
(2006)
Med. Sci. Monit.
, vol.12
, pp. SR17-23
-
-
Leung, M.1
Chan, A.H.2
-
18
-
-
0242717589
-
Coronavirus as a possible cause of severe acute respiratory syndrome
-
Peiris, J.S. et al. Coronavirus as a possible cause of severe acute respiratory syndrome. Lancet 361, 1319-1325 (2003).
-
(2003)
Lancet
, vol.361
, pp. 1319-1325
-
-
Peiris, J.S.1
-
19
-
-
84929455227
-
Global concerns regarding novel influenza A (H7N9) virus infections
-
Uyeki, T.M. & Cox, N.J. Global concerns regarding novel influenza A (H7N9) virus infections. N. Engl. J. Med. 11, 11 (2013).
-
(2013)
N. Engl. J. Med.
, vol.11
, pp. 11
-
-
Uyeki, T.M.1
Cox, N.J.2
-
20
-
-
0034740218
-
The characteristics of PM2.5 in Beijing
-
He, K. et al. The characteristics of PM2.5 in Beijing, China. Atmos. Environ. 35, 4959-4970 (2001).
-
(2001)
China. Atmos. Environ.
, vol.35
, pp. 4959-4970
-
-
He, K.1
-
21
-
-
77950429143
-
Quantifying the air pollutants emission reduction during the 2008 Olympic games in Beijing
-
Wang, S. et al. Quantifying the air pollutants emission reduction during the 2008 Olympic games in Beijing. Environ. Sci. Technol. 44, 2490-2496 (2010).
-
(2010)
Environ. Sci. Technol.
, vol.44
, pp. 2490-2496
-
-
Wang, S.1
-
22
-
-
79957940907
-
Characteristics of PM2.5 speciation in representative megacities and across China
-
Yang, F. et al. Characteristics of PM2.5 speciation in representative megacities and across China. Atmos. Chem. Phys. 11, 5207-5219 (2011).
-
(2011)
Atmos. Chem. Phys.
, vol.11
, pp. 5207-5219
-
-
Yang, F.1
-
23
-
-
0035036497
-
On the modification of the low-flow-rate PM10 dichotomous sampler inlet
-
Tolocka, M.P., Peters, T.M., Vanderpool, R.W., Chen, F.L. & Wiener, R.W. On the modification of the low-flow-rate PM10 dichotomous sampler inlet. Aerosol. Sci. Technol. 34, 407-415 (2001).
-
(2001)
Aerosol. Sci. Technol.
, vol.34
, pp. 407-415
-
-
Tolocka, M.P.1
Peters, T.M.2
Vanderpool, R.W.3
Chen, F.L.4
Wiener, R.W.5
-
24
-
-
72849144434
-
Sequencing technologies-the next generation
-
Metzker, M.L. Sequencing technologies-the next generation. Nat. Rev. Genet. 11, 31-46 (2010).
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 31-46
-
-
Metzker, M.L.1
-
25
-
-
28844463698
-
Emerging technologies in DNA sequencing
-
Metzker, M.L. Emerging technologies in DNA sequencing. Genome Res. 15, 1767-1776 (2005).
-
(2005)
Genome Res.
, vol.15
, pp. 1767-1776
-
-
Metzker, M.L.1
-
26
-
-
84864440400
-
Metagenomic microbial community profiling using unique clade-specific marker genes
-
Segata, N. et al. Metagenomic microbial community profiling using unique clade-specific marker genes. Nat. Methods 9, 811-814 (2012).
-
(2012)
Nat. Methods
, vol.9
, pp. 811-814
-
-
Segata, N.1
-
27
-
-
84881548286
-
Computational meta?omics for microbial community studies
-
Segata, N. et al. Computational meta?omics for microbial community studies. Mol. Syst. Biol. 9, 666 (2013).
-
(2013)
Mol. Syst. Biol.
, vol.9
, pp. 666
-
-
Segata, N.1
-
28
-
-
53549118607
-
The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer, F. et al. The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9, 1-8 (2008).
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 1-8
-
-
Meyer, F.1
-
29
-
-
67650711615
-
SOAP2: An improved ultrafast tool for short read alignment
-
Li, R. et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 25, 1966-1967 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 1966-1967
-
-
Li, R.1
-
30
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso, J.G. et al. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc. Natl. Acad. Sci. USA 108, 4516-4522 (2011).
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
|