Linkage mapping, molecular cloning and functional analysis of soybean gene Fg3 encoding flavonol 3-O-glucoside/galactoside (1 → 2) glucosyltransferase

BMC Plant Biology

Volumn 15, Issue 1, 2015, Pages

  Di, Shaokang ^a   Yan, Fan ^a   Rodas, Felipe Rojas ^a,e   Rodriguez, Tito O ^a   Murai, Yoshinori ^b   Iwashina, Tsukasa ^b   Sugawara, Satoko ^c   Mori, Tetsuya ^c   Nakabayashi, Ryo ^c   Yonekura Sakakibara, Keiko ^c   Saito, Kazuki ^c   Takahashi, Ryoji ^a,d  

^a UNIVERSITY OF TSUKUBA   (Japan)

^b DEPARTMENT OF BOTANY   (Japan)

^c Elements Chemistry Laboratory   (Japan)

^d NATIONAL INSTITUTE OF CROP SCIENCE   (Japan)

^e Laboratory of Limnology   (Colombia)

Author keywords

Fg3 gene; Flavonol 3 O glucoside galactoside (1 2) glucosyltransferase; Flavonol glycoside; Glycine max; Soybean

Indexed keywords

GLYCINE MAX;

FLAVONOL DERIVATIVE; GLUCOSYLTRANSFERASE; GLYCOSIDE;

AMINO ACID SEQUENCE; CHEMISTRY; CHROMOSOMAL MAPPING; ENZYME SPECIFICITY; GENE EXPRESSION REGULATION; GENETIC POLYMORPHISM; GENETIC RECOMBINATION; GENETICS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; INBREEDING; INHERITANCE; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; PHYLOGENY; PLANT GENE; PROCEDURES; SOYBEAN;

AMINO ACID SEQUENCE; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CHROMOSOME MAPPING; CLONING, MOLECULAR; FLAVONOLS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GLUCOSYLTRANSFERASES; GLYCOSIDES; INBREEDING; INHERITANCE PATTERNS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; RECOMBINATION, GENETIC; SOYBEANS; SUBSTRATE SPECIFICITY;

EID: 84929430368     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/s12870-015-0504-7     Document Type: Article

References (32)

1. Buttery BR, Buzzell RI. Varietal differences in leaf flavonoids of soybeans. Crop Sci. 1973;13:103-6.
2. Buzzell RI, Buttery BR. Flavonol glycoside genes in soybeans. Can J Genet Cytol. 1974;16:897-9.
3. Buzzell RI, Buttery BR. Inheritance of an anomalous flavonol glycoside gene in soybean. Genome. 1992;35:636-8.
4. Buzzell RI. Soybean linkage tests. Soyb Genet Newsl. 1974;1:11-4.
5. Buttery BR, Buzzell RI. Flavonol glycoside genes and photosynthesis in soybeans. Crop Sci. 1976;16:547-50.
6. Buzzell RI, Buttery BR. Genetics of leaf waviness in soybean. Soyb Genet Newsl. 1998;25:23-4.
7. Lairson LL, Henrissat B, Davies GJ, Withers SG. Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem. 2008;77:521-55.
8. Yonekura-Sakakibara K, Hanada K. An evolutionary view of functional diversity in family 1 glycosyltransferases. Plant J. 2011;66:182-93.
9. Rojas Rodas F, Rodriguez TO, Murai Y, Iwashina T, Sugawara S, Suzuki M, et al. Linkage mapping, molecular cloning and functional analysis of soybean gene Fg2 encoding flavonol 3-O-glucoside (1 → 6) rhamnosyltransferase. Plant Mol Biol. 2014;84:287-300.
10. Buttery BR, Buzzell RI. Soybean flavonol glycosides: identification and biochemical genetics. Can J Bot. 1975;53:219-24.
11. Murai Y, Takahashi R, Rodas FR, Kitajima J, Iwashina T. New flavonol triglycosides from the leaves of soybean cultivars. Natl Prod Commun. 2013;8:453-6.
12. Fehr WR, Caviness CE, Burmood DT, Pennington JS. Stage of development descriptions for soybeans, Glycine max (L.) Merrill. Crop Sci. 1971;11:929-31.
13. Murray MG, Thompson WF. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 1980;8:4321-5.
14. Song QJ, Marek LF, Shoemaker RC, Lark KG, Concibido VC, Delannay X, et al. A new integrated genetic linkage map of the soybean. Theor Appl Genet. 2004;109:122-8.
15. Hisano H, Sato S, Isobe S, Sasamoto S, Wada T, Matsuno A, et al. Characterization of the soybean genome using EST-derived microsatellite markers. DNA Res. 2007;14:271-81.
16. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, et al. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics. 1987;1:174-81.
17. Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG, Kahler AL, et al. An integrated genetic linkage map of the soybean genome. Crop Sci. 1999;39:1464-90.
18. Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997;25:3389-402.
19. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731-9.
20. Offen W, Martinez-Fleites C, Yang M, Kiat-Lim E, Davis BG, Tarling CA, et al. Structure of a flavonoid glucosyltransferase reveals the basis for plant natural product modification. EMBO J. 2006;25:1396-405.
21. Standley DM, Toh H, Nakamura H. GASH: an improved algorithm for maximizing the number of equivalent residues between two protein structures. BMC Bioinformatics 2005;6:221.
22. Yonekura-Sakakibara K, Nakabayashi R, Sugawara S, Tohge T, Ito T, Koyanagi M, et al. A flavonoid 3-O-glucoside:2"-O-glucosyltransferase responsible for terminal modification of pollen-specific flavonols in Arabidopsis thaliana. Plant J. 2014;79:769-82.
23. Yang Z, Nakabayashi R, Okazaki Y, Mori T, Takamatsu S, Kitanaka S, et al. Toward better annotation in plant metabolomics: isolation and structure elucidation of 36 specialized metabolites from (rice) by using MS/MS and NMR analyses. Metabolomics. 2014;10:543-55.
24. Shah DM, Hightower RC, Meagher RB. Genes encoding actin in higher plants: intron positions are highly conserved but the coding sequences are not. J Mol Appl Genet. 1983;2:111-26.
25. Mackenzie PI, Owens IS, Burchell B, Bock KW, Bairoch A, Belanger A, et al. The UDP glycosyltransferase gene superfamily: recommended nomenclature update based on evolutionary divergence. Pharmacogenetics. 1997;7:255-69.
26. Morita Y, Hoshino A, Kikuchi Y, Okuhara H, Ono E, Tanaka Y, et al. Japanese morning glory dusky mutants displaying reddish-brown or purplish-gray flowers are deficient in a novel glycosylation enzyme for anthocyanin biosynthesis, UDP-glucose: anthocyanidin 3-O-glucoside-2"'-O-glucosyltransferase, due to 4-bp insertions in the gene. Plant J. 2005;42:353-63.
27. Iwashina T, Benitez ER, Takahashi R. Analysis of flavonoids in pubescence of soybean near-isogenic lines for pubescence color loci. J Hered. 2006;97:438-43.
28. Buzzell RI. Soybean linkage tests. Soyb Genet Newsl. 1977;472-3.
29. Buzzell RI, Palmer RG. Soybean linkage group 1 tests. Soyb Genet Newsl. 1985;12:32-3.
30. Masada S, Terasawa K, Mizukami H. A single amino acid in the PSPG-box plays an important role in the catalytic function of CaUGT2 (Curcumin glucosyltransferase), a Group D Family 1 glucosyltransferase from Catharanthus roseus. FEBS Lett. 2007;581:2605-10.
31. Sayama T, Ono E, Takagi K, Takada Y, Horikawa M, Nakamoto Y, et al. The Sg-1 glycosyltransferase locus regulates structural diversity of triterpenoid saponins of soybean. Plant Cell. 2012;24:2123-38.
32. Paquette S, Moller BL, Bak S. On the origin of family 1 plant glycosyltransferases. Phytochemistry. 2003;62:399-413.