Binding interaction of sorafenib with bovine serum albumin: Spectroscopic methodologies and molecular docking

Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy

Volumn 149, Issue , 2015, Pages 630-637

  Shi, Jie Hua ^a   Chen, Jun ^a   Wang, Jing ^a   Zhu, Ying Yao ^a   Wang, Qi ^a  

^a ZHEJIANG UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

Bovine serum albumin; Circular dichroism; Fluorescence spectroscopy; Molecular docking; Sorafenib

Indexed keywords

BINDING ENERGY; CIRCULAR DICHROISM SPECTROSCOPY; DICHROISM; FLUORESCENCE; FLUORESCENCE SPECTROSCOPY; HYDROGEN BONDS; MAMMALS; MOLECULAR MODELING; SURFACE PLASMON RESONANCE; VAN DER WAALS FORCES;

BINDING INTERACTION; BOVINE SERUM ALBUMINS; CIRCULAR DICHROSIM; COMPETITIVE EXPERIMENTS; HYDROGEN BONDING INTERACTIONS; MOLECULAR DOCKING; PHYSIOLOGICAL CONDITION; SORAFENIB;

BODY FLUIDS;

BOVINE SERUM ALBUMIN; CARBANILAMIDE DERIVATIVE; NICOTINAMIDE; PROTEIN BINDING; SORAFENIB;

ANALOGS AND DERIVATIVES; ANIMAL; BINDING SITE; BOVINE; CHEMISTRY; CIRCULAR DICHROISM; ENERGY TRANSFER; KINETICS; METABOLISM; MOLECULAR DOCKING; PROTEIN CONFORMATION; THERMODYNAMICS; ULTRAVIOLET SPECTROPHOTOMETRY;

ANIMALS; BINDING SITES; CATTLE; CIRCULAR DICHROISM; ENERGY TRANSFER; KINETICS; MOLECULAR DOCKING SIMULATION; NIACINAMIDE; PHENYLUREA COMPOUNDS; PROTEIN BINDING; PROTEIN CONFORMATION; SERUM ALBUMIN, BOVINE; SPECTROPHOTOMETRY, ULTRAVIOLET; THERMODYNAMICS;

EID: 84929326649     PISSN: 13861425     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.saa.2015.04.034     Document Type: Article

References (37)

1. S. Sugio, A. Kashima, S. Mochizuki, M. Noda, and K. Kobayashi Protein Eng. 12 1999 439 466
2. X.L. Han, F.F. Tian, Y.S. Ge, F.L. Jiang, L. Lai, D.W. Li, J. Wang, L. Chen, and Y. Liu J. Photochem. Photobiol. B 109 2012 1 11
3. S. Bakkialakshmi, and D. Chandrakala Spectrochim. Acta Part A 88 2012 2 9
4. S. Dhar, D.K. Rana, A. Pal, and S.C. Bhattacharya J. Photochem. Photobiol. B 129 2013 69 77
5. H.W. Sun, Y.J. Wu, X.H. Xia, X.Y. Liu, and Z.H. Shi Monatsh. Chem. 144 2013 739 746
6. J.H. Shi, Y.Y. Zhu, J. Wang, J. Chen, and Y.J. Shen Spectrochim. Acta Part A 103 2013 287 294
7. M.D. Meti, S.D. Gunagi, S.T. Nandibewoor, and S.A. Chimatadar Monatsh. Chem. 144 2013 1253 1259
8. N. Shahabadi, and S.M. Fili Spectrochim. Acta Part A 118 2014 422 429
9. J.H. Shi, J. Wang, Y.Y. Zhu, and J. Chen J. Lumin. 145 2014 643 650
10. S.M. Wilhelm, L. Adnane, P. Newell, A. Villanueva, J.M. Llovet, and M. Lynch Mol. Cancer Ther. 7 2008 3129 3140
11. G.M. Keating, and A. Santoro Drugs 69 2009 223 240
12. S.G. Waguespack, S.I. Sherman, M.D. Williams, G.L. Clayman, and C.E. Herzog Thyroid 19 2008 407 412
13. A. Dasari, L. Gore, W.A. Messersmith, S. Diab, A. Jimeno, C.D. Weekes, K.D. Lewis, H.A. Drabkin, T.W. Flaig, and D.R. Camidge Invest. New Drug 31 2013 115 125
14. C.H. Takimoto, and A. Awada Cancer Chemother. Pharmacol. 61 2008 535 548
15. M. Tod, O. Mir, N. Bancelin, R. Coriat, A. Thomas-Schoemann, F. Taieb, P. Boudou-Rouquette, S. Ropert, J. Michels, H. Abbas, J.P. Durand, A. Dauphin, M. Vidal, F. Goldwasser, and B. Blanchet Pharm. Res. 28 2011 3199 3207
16. M.C. Villarroel, K.W. Pratz, L.P. Xu, J.J. Wright, B.D. Smith, and M.A. Rudek Invest. New Drug 30 2012 2096 2102
17. J.H. Shi, J. Wang, Y.Y. Zhu, and J. Chen J. Lumin. 29 2014 522 530
18. A. Mendonca, A.C. Rocha, A.C. Duarte, and E.B.H. Santos Anal. Chim. Acta 788 2013 99 107
19. J.B. Foresman, and A. Frisch Exploring Chemistry with Electronic Structure Methods 1966 Gaussian Inc. Pittsburgh, PA, USA
20. G.M. Morris, R. Huey, W. Lindstrom, M.F. Sanner, R.K. Belew, D.S. Goodsell, and A.J. Olson J. Comput. Chem. 30 2009 2785 2791
21. G.M. Morris, D.S. Goodsell, R.S. Halliday, R. Huey, W.E. Hart, R.K. Belew, and A.J. Olson J. Comput. Chem. 19 1998 1639 1662
22. J. Gasteiger, and M. Marsili Tetrahedron 36 1980 3219 3228
23. R. Tiwari, K. Mahasenan, R. Pavlovicz, C.L. Li, and W. Tjarks J. Chem. Inf. Comput. Sci. 49 2009 1581 1589
24. Y. Moriyama, D. Ohta, K. Hachiya, Y. Mitsui, and K. Takeda J. Protein Chem. 15 1996 265 272
25. J.R. Lakowicz, and G. Weber Biochemistry 12 1973 4161 4170
26. J.R. Lakowicz Principles of Fluorescence Spectroscopy second ed. 1999 Kluwer Academic/Plenum New York
27. Y.J. Hu, Y. Liu, H.B. Wang, X.H. Xiao, and S.S. Qu J. Pharm. Biomed. Anal. 36 2004 915 919
28. P.D. Ross, and S. Subramanian Biochemistry 20 1981 3096 3102
29. T. Karabencheva, and C. Christov Adv. Protein Chem. Struct. Biol. 80 2010 85 115
30. R.W. Woody Circular Dichroism of Protein-Folding Intermediates 2004 Academic Press Inc. USA
31. Z.X. Lu, T. Cui, and Q.L. Shi Applications of Circulardichroism and Optical Rotatory Dispersion in Molecular Biology first ed. 1987 Science Press China
32. H.C. Huang, Z.F. Jiang, and H.J. Zhu Chemistry 70 2007 501 506
33. X.C. Shen, H. Liang, X. He, and X.S. Wang J. Anal. Chem. 32 2004 388 394
34. X.Y. Yu, Z.L. Liao, Y. Qing, H. Liu, X.F. Li, and P.G. Yi Spectrochim. Acta Part A 118 2014 331 336
35. N. Sreerama, and R.W. Woody Anal. Biochem. 209 1993 32 44
36. A.R. Clapp, I.L. Medintz, J.M. Mauro, B.R. Fisher, M.G. Bawendi, and H. Mattoussi J. Am. Chem. Soc. 126 2004 301 310
37. W.G. Gerald, B. Gail, H.L. Xiao, L. Beth, and H. Brian Biophys. J. 74 1998 2702 2713