-
1
-
-
6444223584
-
Divergent adaptation of Escherichia coli to cyclic ultraviolet light exposures
-
Alcantara-Dfaz, D., M. Brena Valle, and J. Serment-Guerrero, 2004 Divergent adaptation of Escherichia coli to cyclic ultraviolet light exposures. Mutagenesis 19: 349-354.
-
(2004)
Mutagenesis
, vol.19
, pp. 349-354
-
-
Alcantara-Dfaz, D.1
Brena Valle, M.2
Serment-Guerrero, J.3
-
2
-
-
47349097264
-
Fixation probabilities depend on life history: Fecundity, generation time and survival in a burst-death model
-
Alexander, H. K., and L. M. Wahl, 2008 Fixation probabilities depend on life history: fecundity, generation time and survival in a burst-death model. Evolution 62: 1600-1609.
-
(2008)
Evolution
, vol.62
, pp. 1600-1609
-
-
Alexander, H.K.1
Wahl, L.M.2
-
3
-
-
84914814450
-
Evolutionary rescue: Linking theory for conservation and medicine
-
Alexander, H. K., G. Martin, O. Y. Martin, and S. Bonhoeffer, 2014 Evolutionary rescue: linking theory for conservation and medicine. Evol. Applications 7: 1161-1179.
-
(2014)
Evol. Applications
, vol.7
, pp. 1161-1179
-
-
Alexander, H.K.1
Martin, G.2
Martin, O.Y.3
Bonhoeffer, S.4
-
4
-
-
85054699475
-
An Introduction to Stochastic Processes with Applications to Biology
-
Boca Raton, FL
-
Allen, L. J. S., 2010 An Introduction to Stochastic Processes with Applications to Biology. Taylor & Francis, Boca Raton, FL.
-
(2010)
Taylor & Francis
-
-
Allen, L.1
-
5
-
-
84888001845
-
Genome dynamics during experimental evolution. Nat
-
Barrick, J. E., and R. E. Lenski, 2013 Genome dynamics during experimental evolution. Nat. Rev. Genet. 14: 827-839.
-
(2013)
Rev. Genet
, vol.14
, pp. 827-839
-
-
Barrick, J.E.1
Lenski, R.E.2
-
6
-
-
0027369371
-
The probability of fixation of a favoured allele in a subdivided population
-
Barton, N. H., 1993 The probability of fixation of a favoured allele in a subdivided population. Genet. Res. 62: 149-157.
-
(1993)
Genet. Res
, vol.62
, pp. 149-157
-
-
Barton, N.H.1
-
7
-
-
0025199548
-
Rapid evolution in response to high-temperature selection
-
Bennett, A. F., K. M. Dao, and R. E. Lenski, 1990 Rapid evolution in response to high-temperature selection. Nature 346: 79-81.
-
(1990)
Nature
, vol.346
, pp. 79-81
-
-
Bennett, A.F.1
Dao, K.M.2
Lenski, R.E.3
-
8
-
-
0038463589
-
Selection in a subdivided population with local extinction and recolonization
-
Cherry, J. L., 2003 Selection in a subdivided population with local extinction and recolonization. Genetics 164: 789-795.
-
(2003)
Genetics
, vol.164
, pp. 789-795
-
-
Cherry, J.L.1
-
9
-
-
2342575559
-
Observing growth and division of large numbers of individual bacteria by image analysis
-
Elfwing, A., Y. LeMarc, J. Baranyi, and A. Ballagi, 2004 Observing growth and division of large numbers of individual bacteria by image analysis. Appl. Environ. Microbiol. 70: 675-678.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 675-678
-
-
Elfwing, A.1
Lemarc, Y.2
Baranyi, J.3
Ballagi, A.4
-
10
-
-
0001122789
-
On the dominance ratio
-
Fisher, R. A., 1922 On the dominance ratio. Proc. R. Soc. Edinb. 50: 204-219.
-
(1922)
Proc. R. Soc. Edinb
, vol.50
, pp. 204-219
-
-
Fisher, R.A.1
-
11
-
-
2542583245
-
The fate of competing beneficial mutations in an asexual population
-
Gerrish, P. J., and R. E. Lenski, 1998 The fate of competing beneficial mutations in an asexual population. Genetica 102/103: 127-144.
-
(1998)
Genetica
, vol.102
, Issue.103
, pp. 127-144
-
-
Gerrish, P.J.1
Lenski, R.E.2
-
12
-
-
77953237121
-
Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in
-
Goodarzi, H., B. D. Bennett, S. Amini, M. L. Reaves, A. K. Hottes et al., 2010 Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli. Mol. Syst. Biol. 6: 378.
-
(2010)
E. Coli. Mol. Syst. Biol
, vol.6
, pp. 378
-
-
Goodarzi, H.1
Bennett, B.D.2
Amini, S.3
Reaves, M.L.4
Hottes, A.K.5
-
13
-
-
0030475823
-
Establishment probability in fluctuating environments: A branching process model
-
Haccou, P., and Y. Iwasa, 1996 Establishment probability in fluctuating environments: a branching process model. Theor. Popul. Biol. 50: 254-280.
-
(1996)
Theor. Popul. Biol
, vol.50
, pp. 254-280
-
-
Haccou, P.1
Iwasa, Y.2
-
14
-
-
84955349191
-
The mathematical theory of natural and artificial selection
-
Haldane, J. B. S., 1927 The mathematical theory of natural and artificial selection. Proc. Camb. Philos. Soc. 23: 838-844.
-
(1927)
Proc. Camb. Philos. Soc
, vol.23
, pp. 838-844
-
-
Haldane, J.1
-
15
-
-
61849084110
-
Surviving the bottleneck: Transmission mutants and the evolution of microbial populations
-
Handel, A., and M. R. Bennett, 2008 Surviving the bottleneck: transmission mutants and the evolution of microbial populations. Genetics 180: 2193-2200.
-
(2008)
Genetics
, vol.180
, pp. 2193-2200
-
-
Handel, A.1
Bennett, M.R.2
-
16
-
-
34547107897
-
Fixation probabilities when the generation times are variable: The burst-death model
-
Hubbarde, J. E., G. Wild, and L. M. Wahl, 2007 Fixation probabilities when the generation times are variable: the burst-death model. Genetics 176: 1703-1712.
-
(2007)
Genetics
, vol.176
, pp. 1703-1712
-
-
Hubbarde, J.E.1
Wild, G.2
Wahl, L.M.3
-
17
-
-
0036669559
-
The fixation probability of a beneficial allele in a population dividing by binary fission
-
Johnson, T., and P. J. Gerrish, 2002 The fixation probability of a beneficial allele in a population dividing by binary fission. Genetica 115: 283-287.
-
(2002)
Genetica
, vol.115
, pp. 283-287
-
-
Johnson, T.1
Gerrish, P.J.2
-
18
-
-
84865866440
-
Experimental evolution
-
Kawecki, T. J., R. E. Lenski, D. Ebert, B. Hollis, I. Olivieri et al., Experimental evolution. Trends Ecol. Evol. 27: 547-560.
-
Trends Ecol. Evol
, vol.27
, pp. 547-560
-
-
Kawecki, T.J.1
Lenski, R.E.2
Ebert, D.3
Hollis, B.4
Olivieri, I.5
-
19
-
-
0000660047
-
Diffusion models in population genetics
-
Kimura, M., 1964 Diffusion models in population genetics. J. Appl. Probab. 1: 177-232.
-
(1964)
J. Appl. Probab
, vol.1
, pp. 177-232
-
-
Kimura, M.1
-
20
-
-
84877729488
-
Evolution in microbes
-
Kussell, E., 2012 Evolution in microbes. Ann. Rev. Biophys. 42: 493-514.
-
(2012)
Ann. Rev. Biophys
, vol.42
, pp. 493-514
-
-
Kussell, E.1
-
21
-
-
33646136880
-
Probability of fixation under weak selection: A branching process unifying approach
-
Lambert, A., 2006 Probability of fixation under weak selection: a branching process unifying approach. Theor. Popul. Biol. 69: 419-441.
-
(2006)
Theor. Popul
, vol.69
, pp. 419-441
-
-
Lambert, A.1
-
22
-
-
34547702851
-
Expected relative fitness and the adaptive topography of fluctuating selection
-
Lande, R., 2007 Expected relative fitness and the adaptive topography of fluctuating selection. Evolution 61: 1835-1846.
-
(2007)
Evolution
, vol.61
, pp. 1835-1846
-
-
Lande, R.1
-
23
-
-
0031851030
-
Fixation probability of an allele in a subdivided population with asymmetric migration
-
Lundy, I. J., and H. P. Possingham, 1998 Fixation probability of an allele in a subdivided population with asymmetric migration. Genet. Res. 71: 237-245.
-
(1998)
Genet. Res
, vol.71
, pp. 237-245
-
-
Lundy, I.J.1
Possingham, H.P.2
-
24
-
-
84877155601
-
The probability of evolutionary rescue: Towards a quantitative comparison between theory and evolution experiments. Philos
-
Martin, G., R. Aguilee, J. Ramsayer, O. Kaltz, and O. Ronce, The probability of evolutionary rescue: towards a quantitative comparison between theory and evolution experiments. Philos. Trans. R. Soc. B 368: 1610-1622.
-
Trans. R. Soc. B
, vol.368
, pp. 1610-1622
-
-
Martin, G.1
Aguilee, R.2
Ramsayer, J.3
Kaltz, O.4
Ronce, O.5
-
25
-
-
84883555753
-
On the findability of genotypes
-
Mc Candlish, D. M., 2013 On the findability of genotypes. Evolution 67: 2592-2603.
-
(2013)
Evolution
, vol.67
, pp. 2592-2603
-
-
Mc Candlish, D.M.1
-
26
-
-
0030994606
-
The probability of fixation in populations of changing size
-
Otto, S. P., and M. C. Whitlock, 1997 The probability of fixation in populations of changing size. Genetics 146: 723-733.
-
(1997)
Genetics
, vol.146
, pp. 723-733
-
-
Otto, S.P.1
Whitlock, M.C.2
-
27
-
-
34249938400
-
Fixation in haploid popuations exhibiting density dependence I: The non-neutral case
-
Parsons, T., and C. Quince, 2007a Fixation in haploid popuations exhibiting density dependence I: the non-neutral case. Theor. Popul. Biol. 72: 121-135.
-
(2007)
Theor. Popul. Biol
, vol.72
, pp. 121-135
-
-
Parsons, T.1
Quince, C.2
-
28
-
-
35348948449
-
Fixation in haploid popuations exhibiting density dependence II: The quasi-neutral case
-
Parsons, T., and C. Quince, 2007b Fixation in haploid popuations exhibiting density dependence II: the quasi-neutral case. Theor. Popul. Biol. 72: 468-479.
-
(2007)
Theor. Popul. Biol
, vol.72
, pp. 468-479
-
-
Parsons, T.1
Quince, C.2
-
29
-
-
56049123655
-
Fixation probabilities for lytic viruses: The attachment-lysis model
-
Patwa, Z., and L. M. Wahl, 2008 Fixation probabilities for lytic viruses: the attachment-lysis model. Genetics 180: 459-470.
-
(2008)
Genetics
, vol.180
, pp. 459-470
-
-
Patwa, Z.1
Wahl, L.M.2
-
30
-
-
0001185068
-
An outline of the pattern of bacterial generation times
-
Powell, E. O., 1958 An outline of the pattern of bacterial generation times. J. Gen. Microbiol. 18: 382-417.
-
(1958)
J. Gen. Microbiol
, vol.18
, pp. 382-417
-
-
Powell, E.O.1
-
31
-
-
0034067586
-
Fixation probabilities when the population size undergoes cyclic fluctuations
-
Pollak, E., 2000 Fixation probabilities when the population size undergoes cyclic fluctuations. Theor. Popul. Biol. 57: 51-58.
-
(2000)
Theor. Popul. Biol
, vol.57
, pp. 51-58
-
-
Pollak, E.1
-
32
-
-
16844369125
-
An empirical test of the mutational landscape model of adaptation using a single-stranded DNA virus. Nat
-
Rokyta, D. R., P. Joyce, S. B. Caudle, and H. A. Wichman, 2005 An empirical test of the mutational landscape model of adaptation using a single-stranded DNA virus. Nat. Genet. 37: 441-444.
-
(2005)
Genet
, vol.37
, pp. 441-444
-
-
Rokyta, D.R.1
Joyce, P.2
Caudle, S.B.3
Wichman, H.A.4
-
33
-
-
33947512878
-
The role of life cycle and migration in selection for variance in offspring number
-
Shpak, M., and S. R. Proulx, 2007 The role of life cycle and migration in selection for variance in offspring number. Bull. Math. Biol. 69: 837-860.
-
(2007)
Bull. Math. Biol
, vol.69
, pp. 837-860
-
-
Shpak, M.1
Proulx, S.R.2
-
34
-
-
50349085576
-
Tightly regulated and heritable division control in single bacterial cells
-
Siegal-Gaskins, D., and S. Crosson, 2008 Tightly regulated and heritable division control in single bacterial cells. Biophys. J. 95: 2063-2072.
-
(2008)
Biophys. J
, vol.95
, pp. 2063-2072
-
-
Siegal-Gaskins, D.1
Crosson, S.2
-
35
-
-
80051501561
-
On the fixation process of a beneficial mutation in a variable environment
-
Uecker, H., and J. Hermisson, 2011 On the fixation process of a beneficial mutation in a variable environment. Genetics 188: 915-930.
-
(2011)
Genetics
, vol.188
, pp. 915-930
-
-
Uecker, H.1
Hermisson, J.2
-
36
-
-
0028163119
-
Long-term experimental evolution in Escherichia coli. II. Changes in life-history traits during adaptation to a seasonal environment
-
Vasi, F., M. Travisano, and R. E. Lenski, 1994 Long-term experimental evolution in Escherichia coli. II. Changes in life-history traits during adaptation to a seasonal environment. Am. Nat. 144: 432-456.
-
(1994)
Am. Nat
, vol.144
, pp. 432-456
-
-
Vasi, F.1
Travisano, M.2
Lenski, R.E.3
-
37
-
-
8544257386
-
Fixation probability favors increased fecundity over reduced generation time
-
Wahl, L. M., and C. S. DeHaan, 2004 Fixation probability favors increased fecundity over reduced generation time. Genetics 168: 1009-1018.
-
(2004)
Genetics
, vol.168
, pp. 1009-1018
-
-
Wahl, L.M.1
Dehaan, C.S.2
-
38
-
-
0035544558
-
The probability that beneficial mutations are lost in populations with periodic bottlenecks
-
Wahl, L. M., and P. J. Gerrish, 2001 The probability that beneficial mutations are lost in populations with periodic bottlenecks. Evolution 55(12): 2606-2610.
-
(2001)
Evolution
, vol.55
, Issue.12
, pp. 2606-2610
-
-
Wahl, L.M.1
Gerrish, P.J.2
-
39
-
-
0036811710
-
Evaluating the impact of population bottlenecks in experimental evolution
-
Wahl, L. M., P. J. Gerrish, and I. Saika-Voivod, 2002 Evaluating the impact of population bottlenecks in experimental evolution. Genetics 162: 961-971.
-
(2002)
Genetics
, vol.162
, pp. 961-971
-
-
Wahl, L.M.1
Gerrish, P.J.2
Saika-Voivod, I.3
-
40
-
-
15244358105
-
Single-cell growth and division dynamics showing epigenetic correlations
-
Wakamoto, Y., J. Ramsden, and K. Yasuda, 2005 Single-cell growth and division dynamics showing epigenetic correlations. Analyst 130: 311-317.
-
(2005)
Analyst
, vol.130
, pp. 311-317
-
-
Wakamoto, Y.1
Ramsden, J.2
Yasuda, K.3
-
41
-
-
80051511547
-
A unified treatment of the probability of fixation when population size and the strength of selection change over time
-
Waxman, D., 2011 A unified treatment of the probability of fixation when population size and the strength of selection change over time. Genetics 188: 907-913.
-
(2011)
Genetics
, vol.188
, pp. 907-913
-
-
Waxman, D.1
-
42
-
-
21044435697
-
Perspectives: Sign epistasis and constraint on evolutionary trajectories
-
Weinreich, D. M., R. A. Watson, and L. Chao, 2005 Perspectives: sign epistasis and constraint on evolutionary trajectories. Evolution 59: 1165-1174.
-
(2005)
Evolution
, vol.59
, pp. 1165-1174
-
-
Weinreich, D.M.1
Watson, R.A.2
Chao, L.3
-
43
-
-
0038124402
-
Fixation probability and time in subdivided populations
-
Whitlock, M. C., 2003 Fixation probability and time in subdivided populations. Genetics 164: 767-779.
-
(2003)
Genetics
, vol.164
, pp. 767-779
-
-
Whitlock, M.C.1
-
44
-
-
0001496671
-
Fisher’s theory of dominance
-
Wright, S., 1929 Fisher’s theory of dominance. Am. Nat. 63: 274-279.
-
(1929)
Am. Nat
, vol.63
, pp. 274-279
-
-
Wright, S.1
|