메뉴 건너뛰기




Volumn 6, Issue , 2015, Pages

Cellulosome stoichiometry in Clostridium cellulolyticum is regulated by selective RNA processing and stabilization

Author keywords

[No Author keywords available]

Indexed keywords

CELLULOSOME; CELLULASE; CELLULOSOME, CLOSTRIDIUM; MULTIENZYME COMPLEX;

EID: 84928813150     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms7900     Document Type: Article
Times cited : (47)

References (63)
  • 1
    • 0027386253 scopus 로고
    • The cellulosome: The exocellular organelle of Clostridium
    • Felix, C. R. & Ljungdahl, L. G. The cellulosome: the exocellular organelle of Clostridium. Annu. Rev. Microbiol. 47, 791-819 (1993).
    • (1993) Annu. Rev. Microbiol , vol.47 , pp. 791-819
    • Felix, C.R.1    Ljungdahl, L.G.2
  • 2
    • 0029582958 scopus 로고
    • Genetic analysis of the form and function of photosystem i and photosystem II
    • Pakrasi, H. B. Genetic analysis of the form and function of photosystem I and photosystem II. Annu. Rev. Genet. 29, 755-776 (1995).
    • (1995) Annu. Rev. Genet , vol.29 , pp. 755-776
    • Pakrasi, H.B.1
  • 3
    • 31044453145 scopus 로고    scopus 로고
    • Pretty subunits all in a row: Using concatenated subunit constructs to force the expression of receptors with defined subunit stoichiometry and spatial arrangement
    • White, M. M. Pretty subunits all in a row: using concatenated subunit constructs to force the expression of receptors with defined subunit stoichiometry and spatial arrangement. Mol. Pharmacol. 69, 407-410 (2006).
    • (2006) Mol. Pharmacol , vol.69 , pp. 407-410
    • White, M.M.1
  • 4
    • 84879501375 scopus 로고    scopus 로고
    • Gene expression control by selective RNA processing and stabilization in bacteria
    • Rochat, T., Bouloc, P. & Repoila, F. Gene expression control by selective RNA processing and stabilization in bacteria. FEMS Microbiol. Lett. 344, 104-113 (2013).
    • (2013) FEMS Microbiol. Lett , vol.344 , pp. 104-113
    • Rochat, T.1    Bouloc, P.2    Repoila, F.3
  • 5
    • 0025816349 scopus 로고
    • Differential decay of a polycistronic Escherichia coli transcript is initiated by RNaseE-dependent endonucleolytic processing
    • Nilsson, P. & Uhlin, B. E. Differential decay of a polycistronic Escherichia coli transcript is initiated by RNaseE-dependent endonucleolytic processing. Mol. Microbiol. 5, 1791-1799 (1991).
    • (1991) Mol. Microbiol , vol.5 , pp. 1791-1799
    • Nilsson, P.1    Uhlin, B.E.2
  • 6
    • 0023663908 scopus 로고
    • Differential mRNA stability controls relative gene expression within a polycistronic operon
    • Newbury, S. F., Smith, N. H. & Higgins, C. F. Differential mRNA stability controls relative gene expression within a polycistronic operon. Cell 51, 1131-1143 (1987).
    • (1987) Cell , vol.51 , pp. 1131-1143
    • Newbury, S.F.1    Smith, N.H.2    Higgins, C.F.3
  • 7
    • 0027131802 scopus 로고
    • Differential decay of RNA of the CFA/I fimbrial operon and control of relative gene expression
    • Jordi, B. J. A. M., Dencamp, I. E. L. O., Dehaan, L. A. M., Vanderzeijst, B. A. M. & Gaastra, W. Differential decay of RNA of the CFA/I fimbrial operon and control of relative gene expression. J. Bacteriol. 175, 7976-7981 (1993).
    • (1993) J. Bacteriol , vol.175 , pp. 7976-7981
    • Jordi, B.J.A.M.1    Dencamp, I.E.L.O.2    Dehaan, L.A.M.3    Vanderzeijst, B.A.M.4    Gaastra, W.5
  • 8
    • 0026623122 scopus 로고
    • RNase E-dependent cleavages in the 50 and 30 regions of the Escherichia coli unc mRNA
    • Patel, A. M. & Dunn, S. D. RNase E-dependent cleavages in the 50 and 30 regions of the Escherichia coli unc mRNA. J. Bacteriol. 174, 3541-3548 (1992).
    • (1992) J. Bacteriol , vol.174 , pp. 3541-3548
    • Patel, A.M.1    Dunn, S.D.2
  • 9
    • 0025305133 scopus 로고
    • Differential mRNA stability controls relative gene expression within the plasmid-encoded arsenical resistance operon
    • Owolabi, J. B. & Rosen, B. P. Differential mRNA stability controls relative gene expression within the plasmid-encoded arsenical resistance operon. J. Bacteriol. 172, 2367-2371 (1990).
    • (1990) J. Bacteriol , vol.172 , pp. 2367-2371
    • Owolabi, J.B.1    Rosen, B.P.2
  • 10
    • 0029744210 scopus 로고    scopus 로고
    • RNase e processing of essential cell division genes mRNA in Escherichia coli
    • Cam, K., Rome, G., Krisch, H. M. & Bouche, J. P. RNase E processing of essential cell division genes mRNA in Escherichia coli. Nucleic Acids Res. 24, 3065-3070 (1996).
    • (1996) Nucleic Acids Res , vol.24 , pp. 3065-3070
    • Cam, K.1    Rome, G.2    Krisch, H.M.3    Bouche, J.P.4
  • 11
    • 58149284237 scopus 로고    scopus 로고
    • Post-transcriptional processing of the LEE4 operon in enterohaemorrhagic Escherichia coli
    • Lodato, P. B. & Kaper, J. B. Post-transcriptional processing of the LEE4 operon in enterohaemorrhagic Escherichia coli. Mol. Microbiol. 71, 273-290 (2009).
    • (2009) Mol. Microbiol , vol.71 , pp. 273-290
    • Lodato, P.B.1    Kaper, J.B.2
  • 12
    • 0021978242 scopus 로고
    • Differential expression of photosynthesis genes in R. Capsulata results from segmental differences in stability within the polycistronic rxcA transcript
    • Belasco, J. G., Beatty, J. T., Adams, C. W., von Gabain, A. & Cohen, S. N. Differential expression of photosynthesis genes in R. capsulata results from segmental differences in stability within the polycistronic rxcA transcript. Cell 40, 171-181 (1985).
    • (1985) Cell , vol.40 , pp. 171-181
    • Belasco, J.G.1    Beatty, J.T.2    Adams, C.W.3    Von Gabain, A.4    Cohen, S.N.5
  • 13
    • 0027182142 scopus 로고
    • The role of mRNA degradation in the regulated expression of bacterial photosynthesis genes
    • Klug, G. The role of mRNA degradation in the regulated expression of bacterial photosynthesis genes. Mol. Microbiol. 9, 1-7 (1993).
    • (1993) Mol. Microbiol , vol.9 , pp. 1-7
    • Klug, G.1
  • 14
    • 0028987956 scopus 로고
    • Site-specific RNase e cleavage of oligonucleotides and inhibition by stem-loops
    • McDowall, K. J., Kaberdin, V. R., Wu, S. W., Cohen, S. N. & Lin-Chao, S. Site-specific RNase E cleavage of oligonucleotides and inhibition by stem-loops. Nature 374, 287-290 (1995).
    • (1995) Nature , vol.374 , pp. 287-290
    • McDowall, K.J.1    Kaberdin, V.R.2    Wu, S.W.3    Cohen, S.N.4    Lin-Chao, S.5
  • 15
    • 37249040135 scopus 로고    scopus 로고
    • Mechanism of mRNA destabilization by the glmS ribozyme
    • Collins, J. A., Irnov, I., Baker, S. & Winkler, W. C. Mechanism of mRNA destabilization by the glmS ribozyme. Genes Dev. 21, 3356-3368 (2007).
    • (2007) Genes Dev , vol.21 , pp. 3356-3368
    • Collins, J.A.1    Irnov, I.2    Baker, S.3    Winkler, W.C.4
  • 16
    • 33747078696 scopus 로고    scopus 로고
    • Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes
    • Pfleger, B. F., Pitera, D. J., Smolke, C. D. & Keasling, J. D. Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes. Nature Biotechnol. 24, 1027-1032 (2006).
    • (2006) Nature Biotechnol , vol.24 , pp. 1027-1032
    • Pfleger, B.F.1    Pitera, D.J.2    Smolke, C.D.3    Keasling, J.D.4
  • 17
    • 70849119931 scopus 로고    scopus 로고
    • Transcriptome complexity in a genome-reduced bacterium
    • Guell, M. et al. Transcriptome complexity in a genome-reduced bacterium. Science 326, 1268-1271 (2009).
    • (2009) Science , vol.326 , pp. 1268-1271
    • Guell, M.1
  • 18
    • 84055214198 scopus 로고    scopus 로고
    • Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp
    • Mitschke, J., Vioque, A., Haas, F., Hess, W. R. & Muro-Pastor, A. M. Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp. PCC7120. Proc. Natl Acad. Sci. USA 108, 20130-20135 (2011).
    • (2011) PCC7120. Proc. Natl Acad. Sci. USA , vol.108 , pp. 20130-20135
    • Mitschke, J.1    Vioque, A.2    Haas, F.3    Hess, W.R.4    Muro-Pastor, A.M.5
  • 19
    • 77955149193 scopus 로고    scopus 로고
    • The critical role of RNA processing and degradation in the control of gene expression
    • Arraiano, C. M. et al. The critical role of RNA processing and degradation in the control of gene expression. FEMS Microbiol. Rev. 34, 883-923 (2010).
    • (2010) FEMS Microbiol. Rev , vol.34 , pp. 883-923
    • Arraiano, C.M.1
  • 20
    • 0034910795 scopus 로고    scopus 로고
    • Transcription of glycolytic genes and operons in Bacillus subtilis: Evidence for the presence of multiple levels of control of the gapA operon
    • Ludwig, H. et al. Transcription of glycolytic genes and operons in Bacillus subtilis: evidence for the presence of multiple levels of control of the gapA operon. Mol. Microbiol. 41, 409-422 (2001).
    • (2001) Mol. Microbiol , vol.41 , pp. 409-422
    • Ludwig, H.1
  • 21
    • 23744447992 scopus 로고    scopus 로고
    • Clostridium cellulolyticum: Model organism of mesophilic cellulolytic clostridia
    • Desvaux, M. Clostridium cellulolyticum: model organism of mesophilic cellulolytic clostridia. FEMS Microbiol. Rev. 29, 741-764 (2005).
    • (2005) FEMS Microbiol. Rev , vol.29 , pp. 741-764
    • Desvaux, M.1
  • 23
    • 65549102556 scopus 로고    scopus 로고
    • The cellulosomes from Clostridium cellulolyticum: Identification of new components and synergies between complexes
    • Fendri, I. et al. The cellulosomes from Clostridium cellulolyticum: identification of new components and synergies between complexes. FEBS J. 276, 3076-3086 (2009).
    • (2009) FEBS J. , vol.276 , pp. 3076-3086
    • Fendri, I.1
  • 24
    • 4143139469 scopus 로고    scopus 로고
    • The cellulosomes: Multienzyme machines for degradation of plant cell wall polysaccharides
    • Bayer, E. A., Belaich, J. P., Shoham, Y. & Lamed, R. The cellulosomes: multienzyme machines for degradation of plant cell wall polysaccharides. Annu. Rev. Microbiol. 58, 521-554 (2004).
    • (2004) Annu. Rev. Microbiol , vol.58 , pp. 521-554
    • Bayer, E.A.1    Belaich, J.P.2    Shoham, Y.3    Lamed, R.4
  • 26
    • 84878083304 scopus 로고    scopus 로고
    • Structure and regulation of the cellulose degradome in Clostridium cellulolyticum
    • Xu, C. et al. Structure and regulation of the cellulose degradome in Clostridium cellulolyticum. Biotechnol. Biofuels 6, 73 (2013).
    • (2013) Biotechnol. Biofuels , vol.6 , pp. 73
    • Xu, C.1
  • 27
    • 78649689623 scopus 로고    scopus 로고
    • Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production
    • Hemme, C. L. et al. Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production. J. Bacteriol. 192, 6494-6496 (2010).
    • (2010) J. Bacteriol , vol.192 , pp. 6494-6496
    • Hemme, C.L.1
  • 28
    • 84872775014 scopus 로고    scopus 로고
    • Regulation of cel genes of C. Cellulolyticum: Identification of GlyR2, a transcriptional regulator regulating cel5D gene expression
    • Fendri, I. et al. Regulation of cel genes of C. cellulolyticum: identification of GlyR2, a transcriptional regulator regulating cel5D gene expression. PLoS One 8, e44708 (2013).
    • (2013) PLoS One , vol.8 , pp. e44708
    • Fendri, I.1
  • 29
    • 0033956060 scopus 로고    scopus 로고
    • The COG database: A tool for genome-scale analysis of protein functions and evolution
    • Tatusov, R. L., Galperin, M. Y., Natale, D. A. & Koonin, E. V. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28, 33-36 (2000).
    • (2000) Nucleic Acids Res , vol.28 , pp. 33-36
    • Tatusov, R.L.1    Galperin, M.Y.2    Natale, D.A.3    Koonin, E.V.4
  • 30
  • 31
    • 0026949636 scopus 로고
    • The Fo complex of the protontranslocating F-type ATPase of Escherichia coli
    • Deckers-Hebestreit, G. & Altendorf, K. The Fo complex of the protontranslocating F-type ATPase of Escherichia coli. J. Exp. Biol. 172, 451-459 (1992).
    • (1992) J. Exp. Biol , vol.172 , pp. 451-459
    • Deckers-Hebestreit, G.1    Altendorf, K.2
  • 32
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker, M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31, 3406-3415 (2003).
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 33
    • 79954597274 scopus 로고    scopus 로고
    • Termination and antitermination: RNA polymerase runs a stop sign
    • Santangelo, T. J. & Artsimovitch, I. Termination and antitermination: RNA polymerase runs a stop sign. Nat. Rev. Microbiol. 9, 319-329 (2011).
    • (2011) Nat. Rev. Microbiol , vol.9 , pp. 319-329
    • Santangelo, T.J.1    Artsimovitch, I.2
  • 34
    • 34447499141 scopus 로고    scopus 로고
    • Rapid accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake
    • Kingsford, C. L., Ayanbule, K. & Salzberg, S. L. Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. Genome Biol. 8, R22 (2007).
    • (2007) Genome Biol , vol.8 , pp. R22
    • Kingsford, C.L.1    Ayanbule, K.2    Salzberg, S.L.3
  • 35
    • 22044442406 scopus 로고    scopus 로고
    • The cellulosome of Clostridium cellulolyticum
    • Desvaux, M. The cellulosome of Clostridium cellulolyticum. Enzyme Microb. Technol. 37, 373-385 (2005).
    • (2005) Enzyme Microb. Technol , vol.37 , pp. 373-385
    • Desvaux, M.1
  • 36
    • 76649097005 scopus 로고    scopus 로고
    • Modulation of cellulosome composition in Clostridium cellulolyticum: Adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses
    • Blouzard, J. C. et al. Modulation of cellulosome composition in Clostridium cellulolyticum: adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses. Proteomics 10, 541-554 (2010).
    • (2010) Proteomics , vol.10 , pp. 541-554
    • Blouzard, J.C.1
  • 37
    • 0942290450 scopus 로고    scopus 로고
    • Cellulolysis is severely affected in Clostridium cellulolyticum strain cipCMut1
    • Maamar, H. et al. Cellulolysis is severely affected in Clostridium cellulolyticum strain cipCMut1. Mol. Microbiol. 51, 589-598 (2004).
    • (2004) Mol. Microbiol , vol.51 , pp. 589-598
    • Maamar, H.1
  • 38
    • 84891883165 scopus 로고    scopus 로고
    • Improvement of ClosTron for successive gene disruption in Clostridium cellulolyticum using a pyrF-based screening system
    • Cui, G. Z. et al. Improvement of ClosTron for successive gene disruption in Clostridium cellulolyticum using a pyrF-based screening system. Appl. Microbiol. Biotechnol. 98, 313-323 (2014).
    • (2014) Appl. Microbiol. Biotechnol , vol.98 , pp. 313-323
    • Cui, G.Z.1
  • 39
    • 84865165883 scopus 로고    scopus 로고
    • RNA degradation in Bacillus subtilis: An interplay of essential endo- and exoribonucleases
    • Lehnik-Habrink, M., Lewis, R. J., Mader, U. & Stulke, J. RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases. Mol. Microbiol. 84, 1005-1017 (2012).
    • (2012) Mol. Microbiol , vol.84 , pp. 1005-1017
    • Lehnik-Habrink, M.1    Lewis, R.J.2    Mader, U.3    Stulke, J.4
  • 40
    • 0344838397 scopus 로고    scopus 로고
    • Transcription of Clostridium cellulovorans cellulosomal cellulase and hemicellulase genes
    • Han, S. O., Yukawa, H., Inui, M. & Doi, R. H. Transcription of Clostridium cellulovorans cellulosomal cellulase and hemicellulase genes. J. Bacteriol. 185, 2520-2527 (2003).
    • (2003) J. Bacteriol , vol.185 , pp. 2520-2527
    • Han, S.O.1    Yukawa, H.2    Inui, M.3    Doi, R.H.4
  • 41
    • 77953631886 scopus 로고    scopus 로고
    • Cellulosomes: Highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates
    • Fontes, C. M. & Gilbert, H. J. Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates. Annu. Rev. Biochem. 79, 655-681 (2010).
    • (2010) Annu. Rev. Biochem , vol.79 , pp. 655-681
    • Fontes, C.M.1    Gilbert, H.J.2
  • 42
    • 0037137211 scopus 로고    scopus 로고
    • Characterization of the cellulolytic complex (cellulosome) of Clostridium acetobutylicum
    • Sabathe, F., Belaich, A. & Soucaille, P. Characterization of the cellulolytic complex (cellulosome) of Clostridium acetobutylicum. FEMS Microbiol. Lett. 217, 15-22 (2002).
    • (2002) FEMS Microbiol. Lett , vol.217 , pp. 15-22
    • Sabathe, F.1    Belaich, A.2    Soucaille, P.3
  • 43
    • 77953884287 scopus 로고    scopus 로고
    • All things must pass: Contrasts and commonalities in eukaryotic and bacterial mRNA decay
    • Belasco, J. G. All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay. Nat. Rev. Mol. Cell Biol. 11, 467-478 (2010).
    • (2010) Nat. Rev. Mol. Cell Biol , vol.11 , pp. 467-478
    • Belasco, J.G.1
  • 44
    • 0037162469 scopus 로고    scopus 로고
    • Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
    • Bernstein, J. A., Khodursky, A. B., Lin, P. H., Lin-Chao, S. & Cohen, S. N. Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc. Natl Acad. Sci. USA 99, 9697-9702 (2002).
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 9697-9702
    • Bernstein, J.A.1    Khodursky, A.B.2    Lin, P.H.3    Lin-Chao, S.4    Cohen, S.N.5
  • 45
    • 77952311196 scopus 로고    scopus 로고
    • Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus
    • Steglich, C. et al. Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus. Genome Biol. 11, R54 (2010).
    • (2010) Genome Biol , vol.11 , pp. R54
    • Steglich, C.1
  • 46
    • 84874827665 scopus 로고    scopus 로고
    • Role of mRNA stability during bacterial adaptation
    • Dressaire, C. et al. Role of mRNA stability during bacterial adaptation. PLoS One 8, e59059 (2013).
    • (2013) PLoS One , vol.8 , pp. e59059
    • Dressaire, C.1
  • 47
    • 0026602761 scopus 로고
    • A 50-terminal stem-loop structure can stabilize mRNA in Escherichia coli
    • Emory, S. A., Bouvet, P. & Belasco, J. G. A 50-terminal stem-loop structure can stabilize mRNA in Escherichia coli. Genes Dev. 6, 135-148 (1992).
    • (1992) Genes Dev , vol.6 , pp. 135-148
    • Emory, S.A.1    Bouvet, P.2    Belasco, J.G.3
  • 48
    • 67650514021 scopus 로고    scopus 로고
    • Novel activities of glycolytic enzymes in Bacillus subtilis: Interactions with essential proteins involved in mRNA processing
    • Commichau, F. M. et al. Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing. Mol. Cell Proteomics 8, 1350-1360 (2009).
    • (2009) Mol. Cell Proteomics , vol.8 , pp. 1350-1360
    • Commichau, F.M.1
  • 49
    • 79960433506 scopus 로고    scopus 로고
    • Hfq and its constellation of RNA
    • Vogel, J. & Luisi, B. F. Hfq and its constellation of RNA. Nat. Rev. Microbiol. 9, 578-589 (2011).
    • (2011) Nat. Rev. Microbiol , vol.9 , pp. 578-589
    • Vogel, J.1    Luisi, B.F.2
  • 50
    • 68249135259 scopus 로고    scopus 로고
    • Kill the messenger: Bacterial antisense RNA promotes mRNA decay
    • Wagner, E. G. Kill the messenger: bacterial antisense RNA promotes mRNA decay. Nature Struct. Mol. Biol. 16, 804-806 (2009).
    • (2009) Nature Struct. Mol. Biol , vol.16 , pp. 804-806
    • Wagner, E.G.1
  • 51
    • 33645211379 scopus 로고    scopus 로고
    • Transcriptional analysis of the cip-cel gene cluster from Clostridium cellulolyticum
    • Maamar, H., Abdou, L., Boileau, C., Valette, O. & Tardif, C. Transcriptional analysis of the cip-cel gene cluster from Clostridium cellulolyticum. J. Bacteriol. 188, 2614-2624 (2006).
    • (2006) J. Bacteriol , vol.188 , pp. 2614-2624
    • Maamar, H.1    Abdou, L.2    Boileau, C.3    Valette, O.4    Tardif, C.5
  • 52
    • 84873937796 scopus 로고    scopus 로고
    • A two-component system (XydS/R) controls the expression of genes encoding CBM6-containing proteins in response to straw in Clostridium cellulolyticum
    • Celik, H. et al. A two-component system (XydS/R) controls the expression of genes encoding CBM6-containing proteins in response to straw in Clostridium cellulolyticum. PLoS ONE 8, e56063 (2013).
    • (2013) PLoS ONE , vol.8 , pp. e56063
    • Celik, H.1
  • 53
    • 1642586299 scopus 로고    scopus 로고
    • Control of gene expression by a natural metabolite-responsive ribozyme
    • Winkler, W. C., Nahvi, A., Roth, A., Collins, J. A. & Breaker, R. R. Control of gene expression by a natural metabolite-responsive ribozyme. Nature 428, 281-286 (2004).
    • (2004) Nature , vol.428 , pp. 281-286
    • Winkler, W.C.1    Nahvi, A.2    Roth, A.3    Collins, J.A.4    Breaker, R.R.5
  • 54
    • 0030015489 scopus 로고    scopus 로고
    • Processing of the leader mRNA plays a major role in the induction of thrS expression following threonine starvation in Bacillus subtilis
    • Condon, C., Putzer, H. & Grunberg-Manago, M. Processing of the leader mRNA plays a major role in the induction of thrS expression following threonine starvation in Bacillus subtilis. Proc. Natl Acad. Sci. USA 93, 6992-6997 (1996).
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 6992-6997
    • Condon, C.1    Putzer, H.2    Grunberg-Manago, M.3
  • 55
    • 34447516925 scopus 로고    scopus 로고
    • Evolution of symbiotic bacteria in the distal human intestine
    • Xu, J. et al. Evolution of symbiotic bacteria in the distal human intestine. PLoS Biol. 5, e156 (2007).
    • (2007) PLoS Biol , vol.5 , pp. e156
    • Xu, J.1
  • 56
    • 77949425194 scopus 로고    scopus 로고
    • The primary transcriptome of the major human pathogen Helicobacter pylori
    • Sharma, C. M. et al. The primary transcriptome of the major human pathogen Helicobacter pylori. Nature 464, 250-255 (2010).
    • (2010) Nature , vol.464 , pp. 250-255
    • Sharma, C.M.1
  • 57
    • 67650711615 scopus 로고    scopus 로고
    • SOAP2: An improved ultrafast tool for short read alignment
    • Li, R. et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 25, 1966-1967 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1966-1967
    • Li, R.1
  • 58
    • 77953176036 scopus 로고    scopus 로고
    • A scaling normalization method for differential expression analysis of RNA-seq data
    • Robinson, M. D. & Oshlack, A. A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol. 11, R25 (2010).
    • (2010) Genome Biol , vol.11 , pp. R25
    • Robinson, M.D.1    Oshlack, A.2
  • 59
    • 84860364258 scopus 로고    scopus 로고
    • Targeted gene engineering in Clostridium cellulolyticum H10 without methylation
    • Cui, G. Z. et al. Targeted gene engineering in Clostridium cellulolyticum H10 without methylation. J. Microbiol. Methods 89, 201-208 (2012).
    • (2012) J. Microbiol. Methods , vol.89 , pp. 201-208
    • Cui, G.Z.1
  • 60
    • 0034522972 scopus 로고    scopus 로고
    • Gene transfer to Clostridium cellulolyticum ATCC 35319
    • Jennert, K. C. B., Tardif, C., Young, D. I. & Young, M. Gene transfer to Clostridium cellulolyticum ATCC 35319. Microbiology 146, 3071-3080 (2000).
    • (2000) Microbiology , vol.146 , pp. 3071-3080
    • Jennert, K.C.B.1    Tardif, C.2    Young, D.I.3    Young, M.4
  • 61
    • 36248966555 scopus 로고    scopus 로고
    • Targeted gene disruption by use of a group II intron (targetron) vector in Clostridium acetobutylicum
    • Shao, L. et al. Targeted gene disruption by use of a group II intron (targetron) vector in Clostridium acetobutylicum. Cell Res. 17, 963-965 (2007).
    • (2007) Cell Res , vol.17 , pp. 963-965
    • Shao, L.1
  • 62
    • 0742289608 scopus 로고    scopus 로고
    • Use of computerdesigned group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes
    • Perutka, J., Wang, W. J., Goerlitz, D. & Lambowitz, A. M. Use of computerdesigned group II introns to disrupt Escherichia coli DExH/D-box protein and DNA helicase genes. J. Mol. Biol. 336, 421-439 (2004).
    • (2004) J. Mol. Biol , vol.336 , pp. 421-439
    • Perutka, J.1    Wang, W.J.2    Goerlitz, D.3    Lambowitz, A.M.4
  • 63
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K. et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739 (2011).
    • (2011) Mol. Biol. Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.