Label-free surface-enhanced Raman spectroscopy detection of DNA with single-base sensitivity

Journal of the American Chemical Society

Volumn 137, Issue 15, 2015, Pages 5149-5154

  Xu, Li Jia ^a,b   Lei, Zhi Chao ^a,b   Li, Jiuxing ^b   Zong, Cheng ^a,b   Yang, Chaoyong James ^a,b   Ren, Bin ^a,b  

^a XIAMEN UNIVERSITY   (China)

^b XIAMEN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL ANALYSIS; LIGHT TRANSMISSION; RAMAN SPECTROSCOPY; SIGNAL DETECTION; SILVER;

CHEMICAL INFORMATION; DOUBLE-STRAND DNAS; HIGH SENSITIVITY; INTERNAL STANDARDS; LABEL-FREE DETECTION; PHOSPHATE BACKBONE; PHYSIOLOGICAL CONDITION; SURFACE ENHANCED RAMAN SPECTROSCOPY;

DNA;

ADENINE; CYTOSINE; DNA BASE; DOUBLE STRANDED DNA; OLIGONUCLEOTIDE; PHOSPHATE; SILVER NANOPARTICLE; SINGLE STRANDED DNA; DNA;

AQUEOUS SOLUTION; ARTICLE; DNA DETERMINATION; DNA HYBRIDIZATION; DNA SEQUENCE; DNA STRUCTURE; GENE MUTATION; RAMAN SPECTROMETRY; STANDARD; SURFACE ENHANCED RAMAN SPECTROSCOPY; SURFACE PROPERTY; CHEMISTRY;

DNA; SPECTRUM ANALYSIS, RAMAN; SURFACE PROPERTIES;

EID: 84928485284     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/jacs.5b01426     Document Type: Article

References (48)

1. Cao, Y. C.; Jin, R.; Mirkin, C. A. Science 2002, 297, 1536-1540
2. Divne, A. M.; Allen, M. Forensic Sci. Int. 2005, 154, 111-121
3. Dong, L. Q.; Zhou, J. Z.; Wu, L. L.; Dong, P.; Lin, Z. H. Chem. Phys. Lett. 2002, 354, 458-465
4. Antonio, K. A.; Schultz, Z. D. Anal. Chem. 2013, 86, 30-46
5. Schadt, E. E.; Turner, S.; Kasarskis, A. Hum. Mol. Genet. 2010, 19, R227-R240
6. Niemeyer, C. M.; Blohm, D. Angew. Chem., Int. Ed. 1999, 38, 2865-2870
7. Faulds, K.; Smith, W. E.; Graham, D. Anal. Chem. 2004, 76, 412-417
8. Barhoumi, A.; Zhang, D.; Tam, F.; Halas, N. J. J. Am. Chem. Soc. 2008, 130, 5523-5529
9. Yuen, J. M.; Shah, N. C.; Walsh, J. T.; Glucksberg, M. R.; Van Duyne, R. P. Anal. Chem. 2010, 82, 8382-8385
10. Singhal, K.; Kalkan, A. K. J. Am. Chem. Soc. 2010, 132, 429-431
11. Wang, Y. M.; Sevinc, P. C.; He, Y. F.; Lu, H. P. J. Am. Chem. Soc. 2011, 133, 6989-6996
12. Bailo, E.; Deckert, V. Angew. Chem., Int. Ed. 2008, 47, 1658-1661
13. Lee, H.; Lee, J.-H.; Jin, S. M.; Suh, Y. D.; Nam, J.-M. Nano Lett. 2013, 13, 6113-6121
14. Mahajan, S.; Richardson, J.; Brown, T.; Bartlett, P. N. J. Am. Chem. Soc. 2008, 130, 15589-15601
15. Xie, W.; Schluecker, S. Phys. Chem. Chem. Phys. 2013, 15, 5329-5344
16. Strelau, K. K.; Weber, K.; Moeller, R.; Fritzsche, W.; Popp, J. Proc. SPIE 2010, 7715, 771514/1-771514/7
17. Faulds, K.; McKenzie, F.; Smith, W. E.; Graham, D. Angew. Chem., Int. Ed. 2007, 46, 1829-1831
18. van Lierop, D.; Faulds, K.; Graham, D. Anal. Chem. 2011, 83, 5817-5821
19. Zong, S.; Wang, Z.; Chen, H.; Hu, G.; Liu, M.; Chen, P.; Cui, Y. Nanoscale 2014, 6, 1808-1816
20. Wen, G.; Liang, A.; Jiang, Z. Plasmonics 2013, 8, 899-911
21. Ngo, H. T.; Wang, H.-N.; Fales, A. M.; Vo-Dinh, T. Anal. Chem. 2013, 85, 6378-6383
22. Hu, J.; Zhang, C.-Y. Biosens. Bioelectron. 2012, 31, 451-457
23. Graham, D.; Mallinder, B. J.; Smith, W. E. Angew. Chem., Int. Ed. 2000, 39, 1061-1063
24. Johnson, R. P.; Richardson, J. A.; Brown, T.; Bartlett, P. N. J. Am. Chem. Soc. 2012, 134, 14099-14107
25. Gao, F.; Lei, J.; Ju, H. Anal. Chem. 2013, 85, 11788-11793
26. Braun, G.; Lee, S. J.; Dante, M.; Nguyen, T.-Q.; Moskovits, M.; Reich, N. J. Am. Chem. Soc. 2007, 129, 6378-6379
27. Barhoumi, A.; Halas, N. J. J. Am. Chem. Soc. 2010, 132, 12792-12793
28. Panikkanvalappil, S. R.; Mackey, M. A.; El-Sayed, M. A. J. Am. Chem. Soc. 2013, 135, 4815-4821
29. Panikkanvalappil, S. R.; Mahmoud, M. A.; Mackey, M. A.; El-Sayed, M. A. ACS Nano 2013, 7, 7524-7533
30. Rao, S.; Raj, S.; Cossins, B.; Marro, M.; Guallar, V.; Petrov, D. Biophys. J. 2013, 104, 156-162
31. Abell, J. L.; Garren, J. M.; Driskell, J. D.; Tripp, R. A.; Zhao, Y. J. Am. Chem. Soc. 2012, 134, 12889-12892
32. Bell, S. E. J.; Sirimuthu, N. M. S. J. Am. Chem. Soc. 2006, 128, 15580-15581
33. Papadopoulou, E.; Bell, S. E. J. Angew. Chem., Int. Ed. 2011, 50, 9058-9061
34. Papadopoulou, E.; Bell, S. E. J. Chem.-Eur. J. 2012, 18, 5394-5400
35. Papadopoulou, E.; Bell, S. E. J. Chem. Commun. 2011, 47, 10966-10968
36. Guerrini, L.; Krpetić, Ž.; van Lierop, D.; Alvarez-Puebla, R. A.; Graham, D. Angew. Chem., Int. Ed. 2015, 54, 1144-1148
37. Masetti, M.; Xie, H. N.; Krpetic, Z.; Recanatini, M.; Alvarez-Puebla, R. A.; Guerrini, L. J. Am. Chem. Soc. 2015, 137, 469-476
38. Stuart, D. A.; Yuen, J. M.; Shah, N.; Lyandres, O.; Yonzon, C. R.; Glucksberg, M. R.; Walsh, J. T.; Van Duyne, R. P. Anal. Chem. 2006, 78, 7211-7215
39. Wu, D. Y.; Li, J. F.; Ren, B.; Tian, Z. Q. Chem. Soc. Rev. 2008, 37, 1025-41
40. Pierre, M. C. S.; Haes, A. J. Anal. Chem. 2012, 84, 7906-7911
41. Negri, P.; Marotta, N. E.; Bottomley, L. A.; Dluhy, R. A. Appl. Spectrosc. 2011, 65, 66-74
42. Xu, L. J.; Zong, C.; Zheng, X. S.; Hu, P.; Feng, J. M.; Ren, B. Anal. Chem. 2014, 86, 2238-45
43. Jess, P. R. T.; Smith, D. D. W.; Mazilu, M.; Dholakia, K.; Riches, A. C.; Herrington, C. S. Int. J. Cancer 2007, 121, 2723-2728
44. Matthaus, C.; Boydston-White, S.; Miljkovic, M.; Romeo, M.; Diem, M. Appl. Spectrosc. 2006, 60, 1-8
45. Matthäus, C.; Chernenko, T.; Newmark, J. A.; Warner, C. M.; Diem, M. Biophys. J. 2007, 93, 668-673
46. Kneipp, J.; Kneipp, H.; McLaughlin, M.; Brown, D.; Kneipp, K. Nano Lett. 2006, 6, 2225-2231
47. Deng, H.; Bloomfield, V. A.; Benevides, J. M.; Thomas, G. J. Biopolymers 1999, 50, 656-666
48. Duguid, J. G.; Bloomfield, V. A.; Benevides, J. M.; Thomas, G. J. Biophys. J. 1996, 71, 3350-3360