Functional Nucleic Acid Nanoparticle-Based Resonance Scattering Spectral Probe

Plasmonics

Volumn 8, Issue 2, 2013, Pages 899-911

  Wen, Guiqing ^a   Liang, Aihui ^a   Jiang, Zhiliang ^a  

^a GUANGXI NORMAL UNIVERSITY   (China)

Author keywords

Aptamer; DNAzyme; Nanoparticle; Resonance Rayleigh scattering; Surface enhanced resonance Raman scattering

Indexed keywords

EID: 84877614068     PISSN: 15571955     EISSN: 15571963     Source Type: Journal    
DOI: 10.1007/s11468-013-9489-y     Document Type: Review

References (70)

1. Shi C, Gu HX, Ma CP (2010) An aptamer-based fluorescent biosensor for potassium ion detection using a pyrene-labeled molecular beacon. Anal Biochem 400(1): 99-102.
2. Oliver K, Connolly AB, Steinhoff HJ, McGregor A, Goody RS, Restle T (2000) HIV-1 reverse transcriptase-pseudoknot RNA aptamer interaction has a binding affinity in the low picomolar range coupled with high specificity. Biol Chem 275: 18271-18278.
3. Burgstaller P, Kochoyan M, Famulok M (1995) Structural probing and damage selection of citrulline and arginine-specific RNA aptamers identify base positions required for binding. Nucleic Acids Res 23: 4769-4776.
4. David E, Szostak HJW (1995) A DNA aptamer that binds adenosine and ATP. Biochem 34: 656-665.
5. 2+ detection with a label-free and fully DNA-structured sensor assembly incorporating G-quadruplex halves. Analyst 134: 1822-1825.
6. Wang N, Kong DM, Shen HX (2011) Amplification of G-quadruplex DNAzymes using PCR-like temperature cycles for specific nucleic acid and single nucleotide polymorphism detection. Chem Commun 47: 1728-1730.
7. Yin BC, Ye BC, Tan WH, Wang H, Xie CC (2009) An allosteric dual-DNAzyme unimolecular probe for colorimetric detection of copper(II). J Am Chem Soc 131(41): 14624-14625.
8. Kong DM (2011) Applications of G-Quadruplex-Hemin DNAzymes in sensor design. Progress in Chemistry 23: 2019-2031.
9. Neo JL, Kamaladasan K, Uttamchandani M (2012) G-quadruplex based probes for visual detection and sensing. Curr Pharm Des 18: 2048-2057.
10. 2+ using gold nanoparticle probes. Acta Chim Sin 67(18): 2139-2143.
11. 2+ based on the aptamer reaction and gold particle resonance scattering effect. Plasmonics 7: 185-190.
12. Jiang ZL, Li JS, Wen GQ, Liu QY, Liang AH (2010) Nanocatalytic resonance scattering spectral analysis. Sci China Chem 53(5): 1049-1054.
13. Liu R, Liu JF, Zhou XX, Jiang GB, Liu R (2011) Applications of Raman-based techniques to on-site and in-vivo analysis. Tr Anal Chem 30: 1462-1476.
14. Smith WE (2008) Practical understanding and use of surface enhanced Raman scattering/surface enhanced resonance Raman scattering in chemical and biological analysis. Chem Soc Rev 37: 955-964.
15. Chen JW, Liu XP, Feng KJ, Liang Y, Jiang JH, Shen GL, Yu RQ (2008) Detection of adenosine using surface-enhanced Raman scattering based on structure-switching signaling aptamer. Biosens Bioelectron 24: 66-71.
16. Cho H, Baker BR, Wachsmann-Hogiu S, Pagba CV, Laurence TA, Lane SM, Lee LP, Tok JBH (2008) Aptamer-based SERRS sensor for thrombin detection. Nano Lett 8: 4386-4390.
17. 2+ using rhodamine 6G as probe. Plasmonics 8. doi: 10. 1007/s11468-012-9476-8.
18. + using resonance Rayleigh scattering as detection technique and the modified-nanogold as probe. RSC Adv 3. doi: 10. 1039/C2RA22542E.
19. 4-ascorbic acid particle reaction. Anal Lett 45: 2737.
20. Ren B, Li JF, Huang YF, Zeng ZC, Tian ZQ (2010) Electrochemical surface-enhanced Raman spectroscopy-current status and perspective electrochemistry. Chin J Electrochem 16: 305-316.
21. Ni DD, Wang WW, Yao JL, Zhang XJ, Gu RA (2011) Fabrication of reproducible surface enhanced Raman scattering substrate and its application. Spectroscopy and Spectral Analysis 31: 394-397.
22. Wang YL, Irudayaraj J (2011) A SERS DNAzyme biosensor for lead ion detection. Chem Commun 47: 4394-4396.
23. Dougan JA, Faulds K (2012) Surface enhanced Raman scattering for multiplexed detection. Analyst 137: 545-554.
24. Miller GA (1978) Fluctuation theory of the resonance enhancement of Rayleigh scattering in absorbing media. J Phys Chem 82(5): 616-618.
25. Li YF, Huang CZ, Hu XL (1998) The principles and the applications of resonance light scattering technique in the research of biochemistry and bioanalysis. Chin J Anal Chem 26(12): 1508-1512.
26. Jiang ZL (2003) Nanoparticle and resonance scattering spectroscopy. Guangxi Normal University Press, Guilin, p 159.
27. Jiang ZL, Fan YY, Chen ML, Liang AH, Liao XJ, Wen GQ, Shen XC, He XC, Pan HC, Jiang HS (2009) Resonance scattering spectral detection of trace Hg(II) using aptamer modified nanogold as probe and nanocatalyst. Anal Chem 81: 5439-5445.
28. Zhang JQ, Wang YS, He Y, Jiang T, Yang HM, Tan X, Kang RH, Yuan YK, Shi LF (2010) Determination of urinary adenosine using resonance light scattering of gold nanoparticles modified structure-switching aptamer. Anal Biochem 397: 212-217.
29. Zhang Y (2011) Aptamer-nanogold RS spectral method for the determination of Hg and U [D]. Guangxi Normal University, Guilin.
30. Liang AH, Li JS, Jiang CN, Jiang ZL (2010) Highly selective resonance scattering detection of the trace thrombin using aptamer-modified AuRe nanoprobe. Bioproc Biosyst Eng 33(9): 1087-1094.
31. Jiang ZL, Zhou LP, Liang AH (2011) Resonance scattering detection of trace melamine using aptamer-modified nanosilver probe as catalyst without separation of its aggregations. Chem Commun 47(11): 3162-3164.
32. Liang AH, Ouyang HX, Jiang ZL (2011) Resonance scattering spectral detection of trace ATP based on label-free aptamer reaction and nanogold catalysis. Analyst 136(21): 4514-4519.
33. 3-NaI-cationic surfactant catalytic reaction. Anal Lett 44(8): 1442-1453.
34. Wen GQ, Liang AH, Jiang ZL, Liao XJ, Li JF, Jiang HS (2010) Resonance scattering spectral detection of ultratrace Hg(II) using herring sperm DNA modified nanogold probe as catalyst. Luminescence 25(5): 373-377.
35. 2+ using herring sperm DNA modified nanogold as catalyst of the Fehling reaction. Acta Chim Sin 68(1): 83-88.
36. 4-ascorbic acid as indicator reaction. Talanta 80(3): 1287-1291.
37. 2+ using resonance scattering as detection technique. Chin J Chem 28(7): 1159-1164.
38. Ling SM, Fan YY, Jiang ZL, Wen GQ, Liu QY, Liang AH (2010) Resonance scattering spectral detection of trace Pb2+ using aptamer modified nanogold as a probe. Acta Chim Sin 68(4): 339-344.
39. 2+ using aptamer modified AuPd nanoalloy as probe. Plasmonics 5(4): 375-381.
40. + by aptamer-modified nanogold probe. Spectroscopy and Spectral Analysis 30(11): 3115-3118.
41. 2+. Nanoscale 3(8): 3178-3184.
42. Fleischmann M, Hendra PJ, McQuillan AJ (1974) Raman spectra of pyridine adsorbed at a silver electrode. Chem Phy Lett 26(2): 163-166.
43. Jeanmaire DL, van Duyne RP, Sloan AP (1977) Surface Raman spectroelectrochemistry: part I. Heterocyclic, aromatic, and aliphatic amines adsorbed on the anodized silver electrode. J Electroanal Chem Interfac Electrochem 84(1): 1-20.
44. Albrecht MG, Creighton JA (1977) Anomalously intense Raman of pyridine at a silver electrode. J Am Chem Soc 99(15): 5215-5217.
45. Zhang SM (2008) Laser scattering spectroscopy. Science, Beijing, p p452.
46. Aroca R, Bujalski R (1999) Surface enhanced vibrational spectra of thymine. Vib Spectrosc 19: 11-21.
47. Luo XL, Buckhout-White S, Bentley WE, Rubloff GW (2011) Biofabrication of chitosan-silver composite SERS substrates enabling quantification of adenine by a spectroscopic shift. Biofabrication 3(3): 1-9.
48. Sha MY, Xu HX, Natan MJ, Cromer R (2008) Surface-enhanced Raman scattering tags for rapid and homogeneous detection of circulating tumor cells in the presence of human whole blood. J Am Chem Soc 130(51): 17214-17215.
49. Hajdukova N, Prochazka M, Molnar P, Stepanek J (2008) SERRS of free-base porphyrins on immobilized metal gold and silver nanoparticles. Vib Spectrosc 48(1): 142-147.
50. Chowdhury J (2010) Adsorption of 2-aminobenzothiazole on nano-colloidal silver surface: a concentration and time dependent SERS study aided by density functional theory. Vib Spectrosc 52: 85-92.
51. Samanta A, Maiti KK, Soh KS, Liao XJ, Vendrell M, Dinish US, Yun SW, Bhuvaneswari R, Kim H, Rautela S, Chung J, Olivo M, Chang YT (2011) Ultrasensitive near-infrared Raman reporters for SERS-based in vivo cancer detection. Angew Chem Int Ed 50(27): 6089-6092.
52. 2+ using rhodamine 6G-aggregated nanosilver as probe. Plasmonics 7: 461-468.
53. Halvoson RA, Vikesland PJ (2010) Surface-enhanced Raman spectroscopy (SERS) for environmental analyses. Environ Sci Technolog 44(20): 7749-7755.
54. Vongsvivut REG, McNaughton D (2010) Surface-enhanced Raman spectroscopic analysis of fonofos pesticide adsorbed on silver and gold nanoparticles. J Raman Spectroscopy 41: 1137-1148.
55. Gao SY, Zhang SX, Yang X, Zhang HJ (2007) Surface-enhanced Raman scattering active substrates. Chemistry 12: 908-914.
56. Cho H, Baker BR, Hogiu SW, Pagba CV, Laurence TA, Lane SM, Lee LP, Tok JBH (2008) Aptamer-based SERRS sensor for thrombin detection. Nano Lett 8(12): 4386-4390.
57. He LL, Lamont E, Veeregowda B, Sreevatsan S, Haynes CL, Gonzalez FD, Labuza TP (2011) Aptamer-based surface-enhanced Raman scattering detection of ricin in liquid foods. Chem Sci 2(8): 1579-1582.
58. Chen JW, Jiang JH, Gao X, Liu GK, Shen GL, Yu RQ (2008) A new aptameric biosensor for cocaine based on surface-enhanced Raman scattering spectroscopy. Chem Eur J 14(27): 8374-8382.
59. Han D, Lim SY, Kim BJ, Piao LL, Chung TD (2010) Mercury(II) detection by SERS based on a single gold microshell. Chem Commun 46: 5587-5589.
60. Senapati T, Senapati D, Singh AK, Fan Z, Kanchanapally R, Ray PC (2011) Highly selective SERS probe for Hg(II) detection using tryptophan-protected popcorn shaped gold nanoparticles. Chem Commun 47(37): 10326-10328.
61. Li M, Zhang JM, Suri S, Sooter LJ, Ma DL, Wu NQ (2012) Detection of adenosine triphosphate with an aptamer biosensor based on surface-enhanced Raman scattering. Anal Chem 84: 2837-2842.
62. Neumann O, Zhang D, Tam F, Lal S, Stafshede PW, Halas NJ (2009) Direct optical detection of aptamer conformational changes induced by target molecules. Anal Chem 81(24): 10002-10006.
63. Fabris L, Schierhorn M, Moskovits M, Bazan GC (2010) Aptatag-based multiplexed assay for protein detection by surface-enhanced Raman spectroscopy. Small 6(14): 1550-1557.
64. Kang T, Yoo SM, Yoon I, Lee SY, Kim B (2010) Patterned multiplex pathogen DNA detection by Au particle-on-wire SERS sensor. Nano Lett 10(4): 1189-1193.
65. Wang YL, Wei H, Li BL, Ren W, Guo SJ, Dong SJ, Wang EK (2007) SERS opens a new way in aptasensor for protein recognition with high sensitivity and selectivity. Chem Commun 48: 5220-5222.
66. Wen GQ, Zhou LP, Li TS, Liang AH, Jiang ZL (2010) A sensitive surface-enhanced Raman scattering method for determination of melamine with aptamer-modified nanosilver probe. Chin J Chem 30(4): 869-874.
67. Dougan JA, MacRae D, Graham D, Faulds K (2011) DNA detection using enzymatic signal production and SERS. Chem Commun 47: 4649-4651.
68. 2+ detection. Chem Eur J 17: 2211-2214.
69. Wang GQ, Chen ZP, Chen LX (2010) Aptamer-nanoparticle-based optical probes. Progress in Chemistry 22(3): 489-499.
70. Sun YH, Kong RM, Lu DQ, Zhang XB, Meng HM, Tan W, Shen GL, Yu RQ (2011) A nanoscale DNA-Au dendrimer as a signal amplifier for the universal design of functional DNA-based SERS biosensors. Chem Commun 47(13): 3840-3842.